Domain Predictions — View

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PF02704

Source: Pfam

Description

Gibberellin regulated protein

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 30

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0096809.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: snakin-1-like [Cicer arietinum] gi\|502125661\|ref\|XP_004499015.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj1g3v1708960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein [Populus tomentosa] gi\|407260765\|gb\|AFT92001.1\|	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF4 TMhelix TRANSMEMBRANE	8
Lj1g3v2173080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: snakin-2-like [Glycine max] gi\|356517954\|ref\|XP_003527650.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj1g3v2173080.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein [Medicago truncatula] gi\|357466949\|ref\|XP_003603759.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj1g3v4205480.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin induced protein [Medicago truncatula] gi\|357509559\|ref\|XP_003625068.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF8 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj2g3v1019950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: gibberellin-regulated protein 14-like [Cicer arietinum] gi\|502090760\|ref\|XP_004489331.1\|	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF11 TRANSMEMBRANE mobidb-lite	8
Lj2g3v1058170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein [Medicago truncatula] gi\|357496419\|ref\|XP_003618498.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix	12
Lj2g3v2560080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellic acid-stimulated protein 1 [Glycine soja] gi\|323319529\|gb\|ADX36135.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix	12
Lj3g3v3441340.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin induced protein [Medicago truncatula] gi\|357509559\|ref\|XP_003625068.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF8 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj4g3v1037540.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein [Medicago truncatula] gi\|357518075\|ref\|XP_003629326.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF2 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj4g3v1549420.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: snakin-2-like [Glycine max] gi\|356562765\|ref\|XP_003549639.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF18 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM_EUK	10
Lj5g3v0198050.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein isoform 1 [Theobroma cacao] gi\|508723127\|gb\|EOY15024.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK mobidb-lite	12
Lj5g3v1853480.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: gibberellin-regulated protein 2-like isoform X1 [Cicer arietinum] gi\|502118676\|ref\|XP_004496364.1\|	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF7 TRANSMEMBRANE	7
Lj5g3v2112030.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: snakin-1-like [Cicer arietinum] gi\|502120269\|ref\|XP_004496906.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF15 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	12
Lj5g3v2258210.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein [Medicago truncatula] gi\|357496419\|ref\|XP_003618498.1\|	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF21 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK TMhelix	12
LotjaGi1g1v0123000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein; TAIR: AT5G15230.1 GAST1 protein homolog 4; Swiss-Prot: sp\|P46690\|GASA4_ARATH Gibberellin-regulated protein 4; TrEMBL-Plants: tr\|I3SB88\|I3SB88_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0123000_LC	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF70 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0219700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein; TAIR: AT1G74670.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|Q6NMQ7\|GASA6_ARATH Gibberellin-regulated protein 6; TrEMBL-Plants: tr\|I3SQC0\|I3SQC0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0219700	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF64 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM TMhelix	12
LotjaGi1g1v0359600_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 1; TAIR: AT5G59845.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|Q948Z4\|SNAK1_SOLTU Snakin-1; TrEMBL-Plants: tr\|I3SLY2\|I3SLY2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0359600_LC	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF74 TMhelix TRANSMEMBRANE	8
LotjaGi1g1v0429000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2, putative; TAIR: AT1G75750.1 GAST1 protein homolog 1; Swiss-Prot: sp\|Q93X17\|SNAK2_SOLTU Snakin-2; TrEMBL-Plants: tr\|I1K7J7\|I1K7J7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0429000	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF66 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11
LotjaGi1g1v0429000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2, putative; TAIR: AT1G22690.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|Q93X17\|SNAK2_SOLTU Snakin-2; TrEMBL-Plants: tr\|G7J582\|G7J582_MEDTR Gibberellin-regulated family protein; Found in the gene: LotjaGi1g1v0429000	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF66 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11
LotjaGi1g1v0502700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein; TAIR: AT5G15230.1 GAST1 protein homolog 4; Swiss-Prot: sp\|P46690\|GASA4_ARATH Gibberellin-regulated protein 4; TrEMBL-Plants: tr\|G7L0Z5\|G7L0Z5_MEDTR Gibberellin-regulated family protein; Found in the gene: LotjaGi1g1v0502700	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF69 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM TMhelix	12
LotjaGi1g1v0668500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein; TAIR: AT3G10185.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|P27057\|GAST1_SOLLC Protein GAST1; TrEMBL-Plants: tr\|I3T9J6\|I3T9J6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0668500	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF52 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11
LotjaGi2g1v0250700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein; TAIR: AT5G14920.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|Q9LFR3\|GASAE_ARATH Gibberellin-regulated protein 14; TrEMBL-Plants: tr\|I3SNW7\|I3SNW7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0250700	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF53 TRANSMEMBRANE mobidb-lite	8
LotjaGi2g1v0259600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated family protein; TAIR: AT5G15230.1 GAST1 protein homolog 4; Swiss-Prot: sp\|P46690\|GASA4_ARATH Gibberellin-regulated protein 4; TrEMBL-Plants: tr\|C6SV89\|C6SV89_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0259600	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF69 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM TMhelix	12
LotjaGi4g1v0127600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2; TAIR: AT1G75750.1 GAST1 protein homolog 1; Swiss-Prot: sp\|Q93X17\|SNAK2_SOLTU Snakin-2; TrEMBL-Plants: tr\|G7LC52\|G7LC52_MEDTR Gibberellin-regulated family protein; Found in the gene: LotjaGi4g1v0127600	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF45 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11
LotjaGi4g1v0238000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2; TAIR: AT5G14920.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|Q93X17\|SNAK2_SOLTU Snakin-2; TrEMBL-Plants: tr\|I3SJU9\|I3SJU9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0238000	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF18 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM	10
LotjaGi5g1v0005800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2; TAIR: AT1G75750.1 GAST1 protein homolog 1; Swiss-Prot: sp\|Q93X17\|SNAK2_SOLTU Snakin-2; TrEMBL-Plants: tr\|I3T0R3\|I3T0R3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0005800	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF66 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11
LotjaGi5g1v0005900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2; TAIR: AT1G75750.1 GAST1 protein homolog 1; Swiss-Prot: sp\|Q93X17\|SNAK2_SOLTU Snakin-2; TrEMBL-Plants: tr\|I3S9L6\|I3S9L6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0005900	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF83 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11
LotjaGi5g1v0279800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 2, putative; TAIR: AT4G09600.1 GAST1 protein homolog 3; Swiss-Prot: sp\|P46687\|GASA3_ARATH Gibberellin-regulated protein 3; TrEMBL-Plants: tr\|A0A151U615\|A0A151U615_CAJCA Gibberellin-regulated protein 3; Found in the gene: LotjaGi5g1v0279800_LC	Domains CYTOPLASMIC_DOMAIN IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF12 TRANSMEMBRANE	7
LotjaGi5g1v0325200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gibberellin-regulated protein 1, putative; TAIR: AT5G59845.1 Gibberellin-regulated family protein; Swiss-Prot: sp\|Q8LFM2\|GASAA_ARATH Gibberellin-regulated protein 10; TrEMBL-Plants: tr\|A0A1J7GN83\|A0A1J7GN83_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325200	Domains IPR003854 NON_CYTOPLASMIC_DOMAIN PF02704 PTHR23201 PTHR23201:SF72 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM SignalP-noTM	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SignalP-noTM	SignalP_GRAM_NEGATIVE	1	3.33