Domain Predictions — View

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PF13450

Source: Pfam

Description

NAD(P)-binding Rossmann-like domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 25

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0268179.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2-like [Glycine max] gi\|356498359\|ref\|XP_003518020.1\|	Domains G3DSA:3.40.50.720 IPR016040 IPR023753 PF13450 PTHR10668 PTHR10668:SF83 SSF51905	7
Lj0g3v0298799.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: squalene monooxygenase-like [Glycine max] gi\|356521261\|ref\|XP_003529275.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 IPR013698 IPR023753 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF1 SSF51905 TMhelix TRANSMEMBRANE	13
Lj1g3v1355770.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: farnesylcysteine lyase-like isoform X1 [Cicer arietinum] gi\|502137092\|ref\|XP_004502965.1\|	Domains G3DSA:3.50.50.60 IPR010795 IPR017046 IPR023753 NON_CYTOPLASMIC_DOMAIN PF07156 PF13450 PIRSF036292 PTHR15944 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905	14
Lj1g3v1779010.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: squalene monooxygenase-like isoform X1 [Cicer arietinum] gi\|502132708\|ref\|XP_004501491.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 IPR013698 IPR023753 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF1 SSF51905 SignalP-TM_GRAM_POSITIVE TMhelix TRANSMEMBRANE	14
Lj1g3v4996180.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FAD/NAD(P)-binding oxidoreductase family protein [Theobroma cacao] gi\|508719141\|gb\|EOY11038.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 G3DSA:3.90.660.10 IPR023753 NON_CYTOPLASMIC_DOMAIN PF13450 PTHR16128 PTHR16128:SF8 SSF51905 TRANSMEMBRANE mobidb-lite	11
Lj3g3v0370530.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial-like [Glycine max] gi\|356557362\|ref\|XP_003546985.1\|	Domains G3DSA:3.50.50.60 IPR007859 IPR023753 PF05187 PF13450 PTHR10617 PTHR10617:SF107 SSF51905 SSF54373 SSF54862 SignalP-TM_GRAM_POSITIVE mobidb-lite	12
Lj3g3v0966670.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FAD/NAD(P)-binding oxidoreductase family protein isoform 1 [Theobroma cacao] gi\|508721934\|gb\|EOY13831.1\|	Domains G3DSA:3.50.50.60 G3DSA:3.90.660.10 IPR002937 IPR023753 PF01593 PF13450 PR00419 PTHR16128 PTHR16128:SF5 SSF51905	10
Lj4g3v0412640.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: squalene monooxygenase-like [Glycine max] gi\|356521261\|ref\|XP_003529275.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 IPR013698 IPR023753 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF1 SSF51905 TMhelix TRANSMEMBRANE	13
Lj5g3v0347610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: squalene monooxygenase-like [Glycine max] gi\|356577688\|ref\|XP_003556956.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 IPR013698 IPR023753 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF1 SSF51905 SignalP-noTM_EUK TMhelix TRANSMEMBRANE	14
Lj6g3v2171780.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: squalene monooxygenase-like [Glycine max] gi\|356521261\|ref\|XP_003529275.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 IPR013698 IPR023753 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF1 SSF51905 SignalP-TM_GRAM_POSITIVE TMhelix TRANSMEMBRANE	14
LotjaGi1g1v0322500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Farnesylcysteine lyase; TAIR: AT5G63910.1 farnesylcysteine lyase; Swiss-Prot: sp\|P57681\|PCYOX_ARATH Farnesylcysteine lyase; TrEMBL-Plants: tr\|A0A151RY30\|A0A151RY30_CAJCA Putative prenylcysteine oxidase; Found in the gene: LotjaGi1g1v0322500	Domains G3DSA:3.50.50.60 IPR010795 IPR017046 IPR036188 NON_CYTOPLASMIC_DOMAIN PF07156 PF13450 PIRSF036292 PTHR15944 PTHR15944:SF0 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905	15
LotjaGi1g1v0363700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|I1K897\|I1K897_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0363700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF10 SSF51905 SignalP-TM TMhelix TRANSMEMBRANE	16
LotjaGi1g1v0782600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FAD/NAD(P)-binding oxidoreductase family protein; TAIR: AT3G04650.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|Q888A4\|RNLS_PSESM Renalase; TrEMBL-Plants: tr\|A0A151TXL5\|A0A151TXL5_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0782600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.50.50.60 G3DSA:3.90.660.10 IPR036188 NON_CYTOPLASMIC_DOMAIN PF13450 PTHR16128 PTHR16128:SF8 SSF51905 TRANSMEMBRANE mobidb-lite	11
LotjaGi3g1v0032400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; TAIR: AT2G43400.1 electron-transfer flavoprotein:ubiquinone oxidoreductase; Swiss-Prot: sp\|O22854\|ETFQO_ARATH Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; TrEMBL-Plants: tr\|K7M988\|K7M988_SOYBN Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; Found in the gene: LotjaGi3g1v0032400	Domains G3DSA:3.30.70.20 G3DSA:3.30.9.90 G3DSA:3.50.50.60 IPR036188 IPR040156 PF05187 PF13450 PTHR10617 PTHR10617:SF107 SSF51905 SSF54373 SSF54862 SignalP-TM mobidb-lite	14
LotjaGi3g1v0141900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	FAD/NAD(P)-binding oxidoreductase family protein; TAIR: AT1G56000.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|Q888A4\|RNLS_PSESM Renalase; TrEMBL-Plants: tr\|A0A0B2R4A3\|A0A0B2R4A3_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0141900	Domains G3DSA:3.50.50.60 G3DSA:3.90.660.10 IPR002937 IPR036188 NON_CYTOPLASMIC_DOMAIN PF01593 PF13450 PTHR16128 PTHR16128:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905	14
LotjaGi4g1v0043300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|I1KL88\|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0043300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|I1KL88\|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0043300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|I1KL88\|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0043300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|I1KL88\|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 TMhelix TRANSMEMBRANE	15
LotjaGi4g1v0043600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|I1KL88\|I1KL88_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0043600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 TMhelix TRANSMEMBRANE	15
LotjaGi5g1v0037500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|A0A0B2RV99\|A0A0B2RV99_GLYSO Squalene monooxygenase; Found in the gene: LotjaGi5g1v0037500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF10 SSF51905 SignalP-noTM TMhelix TRANSMEMBRANE	16
LotjaGi5g1v0108300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Carotenoid isomerase; TAIR: AT1G06820.1 carotenoid isomerase; Swiss-Prot: sp\|Q8S4R4\|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr\|A0A0R0L5D6\|A0A0R0L5D6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0108300	Domains G3DSA:3.50.50.60 G3DSA:3.90.660.50 IPR002937 IPR036188 NON_CYTOPLASMIC_DOMAIN PF01593 PF13450 PTHR46313 PTHR46313:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905	14
LotjaGi6g1v0181200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|K7MRG5\|K7MRG5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181200	Domains G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF4 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51905 SignalP-noTM	17
LotjaGi6g1v0345600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|A0A075DZG2\|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345600	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 SignalP-TM TMhelix TRANSMEMBRANE	16
LotjaGi6g1v0345900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Squalene monooxygenase; TAIR: AT1G58440.1 FAD/NAD(P)-binding oxidoreductase family protein; Swiss-Prot: sp\|O48651\|ERG1_PANGI Squalene monooxygenase; TrEMBL-Plants: tr\|A0A075DZG2\|A0A075DZG2_ASTME Squalene epoxidase; Found in the gene: LotjaGi6g1v0345900	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.9.50 G3DSA:3.50.50.60 IPR013698 IPR036188 IPR040125 NON_CYTOPLASMIC_DOMAIN PF08491 PF13450 PR00420 PTHR10835 PTHR10835:SF5 SSF51905 SignalP-TM TMhelix TRANSMEMBRANE	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	4.00