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Ribosomal RNA adenine dimethylases signature.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | RRNA modification | The covalent alteration of one or more nucleotides within an rRNA molecule to produce an rRNA molecule with a sequence that differs from that coded genetically. | ||
| Molecular function | RRNA (adenine-N6,N6-)-dimethyltransferase activity | Catalysis of the dimethylation two adjacent A residues in the loop closing the 3'-terminal stem of the 18S rRNA, using S-adenosyl-L-methionine as a methyl donor. | ||
| Molecular function | RRNA methyltransferase activity | Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to a nucleoside residue in an rRNA molecule. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: ribosomal RNA small subunit methyltransferase A-like [Glycine max] gi|356568329|ref|XP_003552364.1| | 16 | ||
| – | Dimethyladenosine transferase [Medicago truncatula] gi|357455725|ref|XP_003598143.1| | 16 | ||
| – | Ribosomal RNA small subunit methyltransferase A; TAIR: AT1G01860.1 Ribosomal RNA adenine dimethylase family protein; Swiss-Prot: sp|O65090|DIM1C_ARATH Ribosomal RNA small subunit methyltransferase, chloroplastic; TrEMBL-Plants: tr|I1N3K9|I1N3K9_SOYBN rRNA adenine N(6)-methyltransferase; Found in the gene: LotjaGi1g1v0469600 | 16 | ||
| – | Ribosomal RNA small subunit methyltransferase A; TAIR: AT5G66360.2 Ribosomal RNA adenine dimethylase family protein; Swiss-Prot: sp|Q9FK02|DIM1B_ARATH Ribosomal RNA small subunit methyltransferase, mitochondrial; TrEMBL-Plants: tr|G7KGB1|G7KGB1_MEDTR rRNA adenine N(6)-methyltransferase; Found in the gene: LotjaGi2g1v0385600 | 17 | ||
| – | Ribosomal rna small subunit methyltransferase; TAIR: AT2G47420.1 Ribosomal RNA adenine dimethylase family protein; Swiss-Prot: sp|O22268|DIM1A_ARATH Ribosomal RNA small subunit methyltransferase; TrEMBL-Plants: tr|A0A1J7H0M5|A0A1J7H0M5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0100100 | 17 | ||
| – | Ribosomal rna small subunit methyltransferase; TAIR: AT2G47420.1 Ribosomal RNA adenine dimethylase family protein; Swiss-Prot: sp|O22268|DIM1A_ARATH Ribosomal RNA small subunit methyltransferase; TrEMBL-Plants: tr|A0A1J7H0M5|A0A1J7H0M5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0100100 | 17 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 16.67 |