Domain Predictions — View

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PTHR23270

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0198159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein RRP5 homolog [Cicer arietinum] gi\|502167476\|ref\|XP_004514152.1\|	Domains Coil G3DSA:1.25.40.10 G3DSA:2.40.50.140 IPR003029 IPR003107 IPR008847 IPR011990 IPR012340 IPR022967 PF00575 PF05843 PS50126 PTHR23270 PTHR23270:SF10 SM00316 SM00386 SSF48452 SSF50249 cd05693 cd05703 cd05708 mobidb-lite	22
Lj0g3v0221429.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 30S ribosomal protein S1 homolog [Glycine max] gi\|356538073\|ref\|XP_003537529.1\|	Domains G3DSA:2.40.50.140 IPR003029 IPR012340 IPR022967 NON_CYTOPLASMIC_DOMAIN PF00575 PS50126 PTHR23270 PTHR23270:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00316 SSF50249 SignalP-TM_GRAM_POSITIVE mobidb-lite	17
Lj0g3v0221429.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 30S ribosomal protein S1-like [Cicer arietinum] gi\|502135249\|ref\|XP_004502269.1\|	Domains G3DSA:2.40.50.140 IPR003029 IPR012340 IPR022967 PF00575 PS50126 PTHR23270 PTHR23270:SF9 SM00316 SSF50249	10
Lj0g3v0250179.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 40S ribosomal protein S1-like [Glycine max] gi\|356569689\|ref\|XP_003553029.1\|	Domains PTHR23270 PTHR23270:SF9 mobidb-lite	4
Lj4g3v2928710.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bromodomain testis-specific protein-like [Cicer arietinum] gi\|502139419\|ref\|XP_004503759.1\|	Domains PTHR23270 PTHR23270:SF7 mobidb-lite	4
Lj4g3v2928710.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: bromodomain testis-specific protein-like [Cicer arietinum] gi\|502139419\|ref\|XP_004503759.1\|	Domains G3DSA:2.40.50.140 IPR003029 IPR012340 IPR022967 PF00575 PS50126 PTHR23270 PTHR23270:SF7 SM00316 SSF50249	10
LotjaGi5g1v0113300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyribonucleotide nucleotidyltransferase; TAIR: AT3G11964.2 RIBOSOMAL RNA PROCESSING 5; Swiss-Prot: sp\|F4J8K6\|RRP5_ARATH rRNA biogenesis protein RRP5; TrEMBL-Plants: tr\|I1JFV5\|I1JFV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0113300	Domains Coil G3DSA:1.25.40.10 G3DSA:2.40.50.140 IPR003029 IPR003107 IPR008847 IPR011990 IPR012340 IPR022967 PF00575 PF05843 PS50126 PTHR23270 SM00316 SM00386 SSF48452 SSF50249 cd05693 cd05703 cd05708 mobidb-lite	21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29