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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | AT DNA binding | Interacting selectively and non-covalently with oligo(A) and oligo(T) tracts of DNA (AT DNA). |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508785649|gb|EOY32905.1| | 5 | ||
| – | AT-hook motif nuclear localized protein 20 [Theobroma cacao] gi|508714069|gb|EOY05966.1| | 11 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508776764|gb|EOY24020.1| | 11 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508723537|gb|EOY15434.1| | 9 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508723537|gb|EOY15434.1| | 15 | ||
| – | AT-hook DNA-binding protein [Medicago truncatula] gi|357507933|ref|XP_003624255.1| | 11 | ||
| – | AT-hook motif nuclear localized protein 29 [Arabidopsis thaliana] gi|15223074|ref|NP_177776.1| | 10 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508785649|gb|EOY32905.1| | 9 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508785649|gb|EOY32905.1| | 9 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508776764|gb|EOY24020.1| | 9 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508777264|gb|EOY24520.1| | 11 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508701126|gb|EOX93022.1| | 9 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508701126|gb|EOX93022.1| | 3 | ||
| – | AT-hook motif nuclear-localized protein 22 [Theobroma cacao] gi|508704293|gb|EOX96189.1| | 4 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508777264|gb|EOY24520.1| | 11 | ||
| – | DNA-binding protein [Medicago truncatula] gi|357441305|ref|XP_003590930.1| | 11 | ||
| – | AT-hook DNA-binding family protein [Theobroma cacao] gi|508723537|gb|EOY15434.1| | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT2G42940.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9SJG4|AHL16_ARATH AT-hook motif nuclear-localized protein 16; TrEMBL-Plants: tr|A0A0B2PW89|A0A0B2PW89_GLYSO Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0041800 | 12 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT2G42940.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9SJG4|AHL16_ARATH AT-hook motif nuclear-localized protein 16; TrEMBL-Plants: tr|A0A0B2PW89|A0A0B2PW89_GLYSO Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0041800 | 12 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G14465.1 AT-hook motif nuclear-localized protein 20; Swiss-Prot: sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20; TrEMBL-Plants: tr|B9HMK7|B9HMK7_POPTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0087700 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|I1JGZ4|I1JGZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0138000 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT1G76500.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9C9K7|AHL29_ARATH AT-hook motif nuclear-localized protein 29; TrEMBL-Plants: tr|A0A067LCE8|A0A067LCE8_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0227900_LC | 4 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7HCL8|A0A1J7HCL8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0301100 | 10 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|I1L656|I1L656_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491000 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|I1L656|I1L656_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491000 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|I1L656|I1L656_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491000 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IG21|A0A1J7IG21_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0519400_LC | 8 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IR24|A0A1J7IR24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0020500_LC | 9 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IR24|A0A1J7IR24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0305000_LC | 9 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT2G35270.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O82166|AHL21_ARATH AT-hook motif nuclear-localized protein 21; TrEMBL-Plants: tr|A0A1J7GT77|A0A1J7GT77_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0414700 | 10 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT2G35270.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O82166|AHL21_ARATH AT-hook motif nuclear-localized protein 21; TrEMBL-Plants: tr|A0A1J7GT77|A0A1J7GT77_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0414700 | 10 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT2G45430.1 AT-hook motif nuclear-localized protein 22; Swiss-Prot: sp|O22130|AHL22_ARATH AT-hook motif nuclear-localized protein 22; TrEMBL-Plants: tr|I1LGK4|I1LGK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0428100 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT2G45430.1 AT-hook motif nuclear-localized protein 22; Swiss-Prot: sp|O22130|AHL22_ARATH AT-hook motif nuclear-localized protein 22; TrEMBL-Plants: tr|A0A072TPA5|A0A072TPA5_MEDTR AT hook motif DNA-binding family protein; Found in the gene: LotjaGi3g1v0432100 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|A5C6L7|A5C6L7_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0186400 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G14465.1 AT-hook motif nuclear-localized protein 20; Swiss-Prot: sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20; TrEMBL-Plants: tr|V7BE43|V7BE43_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0183100 | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT3G04570.1 AT-hook motif nuclear-localized protein 19; Swiss-Prot: sp|Q9SR17|AHL19_ARATH AT-hook motif nuclear-localized protein 19; TrEMBL-Plants: tr|I1LBS0|I1LBS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0206600 | 10 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT4G14465.1 AT-hook motif nuclear-localized protein 20; Swiss-Prot: sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20; TrEMBL-Plants: tr|A0A151RXE6|A0A151RXE6_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi6g1v0007100_LC | 11 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT3G55560.1 AT-hook protein of GA feedback 2; Swiss-Prot: sp|Q9M2S3|AHL15_ARATH AT-hook motif nuclear-localized protein 15; TrEMBL-Plants: tr|K7MPQ1|K7MPQ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0063700 | 12 | ||
| – | AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IR24|A0A1J7IR24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0180300_LC | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 2.56 |