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GO:0003680

View this GO term in other databases

Overview

Field Value
Namespace Molecular function
Short description AT DNA binding
Full defintion Interacting selectively and non-covalently with oligo(A) and oligo(T) tracts of DNA (AT DNA).
Subterm of

Relationships

The relationship of GO:0003680 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCjl
PMID
A DNA binding protein that recognizes oligo(dA).oligo(dT) tracts.Winter E, Varshavsky A
EMBO J. 1989 Jun; 8 (6): 1867–77.PMID: 2670564

Oligo(dA).oligo(dT) tracts are common intergenic sequences in many organisms. In the yeast Saccharomyces cerevisiae, these sequences have been shown to influence transcription of adjacent genes. We have purified an oligo(dA).oligo(dT)-binding protein from S. cerevisiae and cloned its gene. This protein, which has been named datin, requires at least 9-11 bp of oligo(dA).oligo(dT) DNA for high affinity binding. The gene for datin (the DAT gene) encodes a 248-residue protein which contains a number of repeated sequence motifs. Datin purified from yeast corresponds to the N-terminal half of the DAT gene product. Null mutants in the DAT gene are viable but phenotypically distinguishable from congenic wild-type strains. We discuss unusual structural features and biochemical properties of datin in relation to its possible functions.

Associated Lotus transcripts 54

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0309609.1
– AT-hook motif nuclear localized protein 20 [Theobroma cacao] gi|508714069|gb|EOY05966.1|
GO terms
1
Lj0g3v0341349.1
– AT-hook DNA-binding family protein [Theobroma cacao] gi|508776764|gb|EOY24020.1|
GO terms
1
Lj1g3v1585840.1
– AT-hook DNA-binding family protein [Theobroma cacao] gi|508723537|gb|EOY15434.1|
GO terms
1
Lj1g3v2896220.1
– AT-hook DNA-binding protein [Medicago truncatula] gi|357507933|ref|XP_003624255.1|
GO terms
1
Lj2g3v2002760.1
– AT-hook DNA-binding family protein [Theobroma cacao] gi|508777264|gb|EOY24520.1|
GO terms
1
Lj4g3v1288490.1
– AT-hook DNA-binding family protein [Theobroma cacao] gi|508777264|gb|EOY24520.1|
GO terms
1
Lj5g3v1329810.1
– DNA-binding protein [Medicago truncatula] gi|357441305|ref|XP_003590930.1|
GO terms
1
Lj6g3v1618390.1
– AT-hook DNA-binding family protein [Theobroma cacao] gi|508723537|gb|EOY15434.1|
GO terms
1
LotjaGi1g1v0041800.1
– AT hook motif DNA-binding family protein; TAIR: AT2G42940.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9SJG4|AHL16_ARATH AT-hook motif nuclear-localized protein 16; TrEMBL-Plants: tr|A0A0B2PW89|A0A0B2PW89_GLYSO Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0041800
GO terms
1
LotjaGi1g1v0041800.2
– AT hook motif DNA-binding family protein; TAIR: AT2G42940.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9SJG4|AHL16_ARATH AT-hook motif nuclear-localized protein 16; TrEMBL-Plants: tr|A0A0B2PW89|A0A0B2PW89_GLYSO Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0041800
GO terms
1
LotjaGi1g1v0087700.1
– AT hook motif DNA-binding family protein; TAIR: AT4G14465.1 AT-hook motif nuclear-localized protein 20; Swiss-Prot: sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20; TrEMBL-Plants: tr|B9HMK7|B9HMK7_POPTR Uncharacterized protein; Found in the gene: LotjaGi1g1v0087700
GO terms
1
LotjaGi1g1v0138000.1
– AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|I1JGZ4|I1JGZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0138000
GO terms
1
LotjaGi1g1v0227900_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT1G76500.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9C9K7|AHL29_ARATH AT-hook motif nuclear-localized protein 29; TrEMBL-Plants: tr|A0A067LCE8|A0A067LCE8_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0227900_LC
GO terms
1
LotjaGi1g1v0301100.1
– AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7HCL8|A0A1J7HCL8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0301100
GO terms
1
LotjaGi1g1v0462800.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A151TB87|A0A151TB87_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0462800
GO terms
1
LotjaGi1g1v0462800.2
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A151TB87|A0A151TB87_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi1g1v0462800
GO terms
1
LotjaGi1g1v0491000.1
– AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|I1L656|I1L656_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491000
GO terms
1
LotjaGi1g1v0491000.2
– AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|I1L656|I1L656_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491000
GO terms
1
LotjaGi1g1v0491000.3
– AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|I1L656|I1L656_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0491000
GO terms
1
LotjaGi1g1v0519400_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IG21|A0A1J7IG21_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0519400_LC
GO terms
1
LotjaGi1g1v0569400.1
– AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|V7AUS6|V7AUS6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0569400
GO terms
1
LotjaGi1g1v0786400.1
– AT hook motif DNA-binding family protein; TAIR: AT3G04590.2 AT hook motif DNA-binding family protein; Swiss-Prot: sp|A1L4X7|AHL14_ARATH AT-hook motif nuclear-localized protein 14; TrEMBL-Plants: tr|I1JRT6|I1JRT6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0786400
GO terms
1
LotjaGi2g1v0020500_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IR24|A0A1J7IR24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0020500_LC
GO terms
1
LotjaGi2g1v0160900_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A0A0LB41|A0A0A0LB41_CUCSA Uncharacterized protein; Found in the gene: LotjaGi2g1v0160900_LC
GO terms
1
LotjaGi2g1v0305000_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IR24|A0A1J7IR24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0305000_LC
GO terms
1
LotjaGi2g1v0414700.1
– AT hook motif DNA-binding family protein; TAIR: AT2G35270.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O82166|AHL21_ARATH AT-hook motif nuclear-localized protein 21; TrEMBL-Plants: tr|A0A1J7GT77|A0A1J7GT77_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0414700
GO terms
1
LotjaGi2g1v0414700.2
– AT hook motif DNA-binding family protein; TAIR: AT2G35270.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O82166|AHL21_ARATH AT-hook motif nuclear-localized protein 21; TrEMBL-Plants: tr|A0A1J7GT77|A0A1J7GT77_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0414700
GO terms
1
LotjaGi2g1v0415000.1
– AT hook motif DNA-binding family protein; TAIR: AT4G17950.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q940I0|AHL13_ARATH AT-hook motif nuclear-localized protein 13; TrEMBL-Plants: tr|A0A0L9UQM7|A0A0L9UQM7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0415000
GO terms
1
LotjaGi2g1v0427700.1
– AT hook, DNA-binding motif-containing protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A068VB24|A0A068VB24_COFCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0427700
GO terms
1
LotjaGi2g1v0427700.2
– AT hook, DNA-binding motif-containing protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|A0A068VB24|A0A068VB24_COFCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0427700
GO terms
1
LotjaGi2g1v0428100.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45430.1 AT-hook motif nuclear-localized protein 22; Swiss-Prot: sp|O22130|AHL22_ARATH AT-hook motif nuclear-localized protein 22; TrEMBL-Plants: tr|I1LGK4|I1LGK4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0428100
GO terms
1
LotjaGi2g1v0433700.1
– AT hook motif DNA-binding family protein; TAIR: AT1G63470.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q8GXB3|AHL5_ARATH AT-hook motif nuclear-localized protein 5; TrEMBL-Plants: tr|I1LGG0|I1LGG0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0433700
GO terms
1
LotjaGi3g1v0123600_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|A0A0S3SCI8|A0A0S3SCI8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0123600_LC
GO terms
1
LotjaGi3g1v0382100.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45850.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O80834|AHL9_ARATH AT-hook motif nuclear-localized protein 9; TrEMBL-Plants: tr|A0A0S3SYX0|A0A0S3SYX0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0382100
GO terms
1
LotjaGi3g1v0382200.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45850.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O80834|AHL9_ARATH AT-hook motif nuclear-localized protein 9; TrEMBL-Plants: tr|V7AN95|V7AN95_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0382200
GO terms
1
LotjaGi3g1v0387200_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT2G33620.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O22812|AHL10_ARATH AT-hook motif nuclear-localized protein 10; TrEMBL-Plants: tr|A0A072UVM8|A0A072UVM8_MEDTR AT hook motif DNA-binding family protein; Found in the gene: LotjaGi3g1v0387200_LC
GO terms
1
LotjaGi3g1v0432100.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45430.1 AT-hook motif nuclear-localized protein 22; Swiss-Prot: sp|O22130|AHL22_ARATH AT-hook motif nuclear-localized protein 22; TrEMBL-Plants: tr|A0A072TPA5|A0A072TPA5_MEDTR AT hook motif DNA-binding family protein; Found in the gene: LotjaGi3g1v0432100
GO terms
1
LotjaGi3g1v0432800.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1JKL2|I1JKL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432800
GO terms
1
LotjaGi3g1v0432800.2
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1JKL2|I1JKL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432800
GO terms
1
LotjaGi3g1v0432800.3
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1JKL2|I1JKL2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0432800
GO terms
1
LotjaGi3g1v0481300.1
– AT hook motif DNA-binding family protein; TAIR: AT2G45850.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|O80834|AHL9_ARATH AT-hook motif nuclear-localized protein 9; TrEMBL-Plants: tr|A0A0S3SCI8|A0A0S3SCI8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481300
GO terms
1
LotjaGi4g1v0186400.1
– AT hook motif DNA-binding family protein; TAIR: AT4G17800.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|O23620|AHL23_ARATH AT-hook motif nuclear-localized protein 23; TrEMBL-Plants: tr|A5C6L7|A5C6L7_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0186400
GO terms
1
LotjaGi4g1v0188300.1
– AT hook motif DNA-binding family protein; TAIR: AT4G17950.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q940I0|AHL13_ARATH AT-hook motif nuclear-localized protein 13; TrEMBL-Plants: tr|V7CEI0|V7CEI0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0188300
GO terms
1
LotjaGi4g1v0212200.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I1K0I8|I1K0I8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0212200
GO terms
1
LotjaGi4g1v0425400.1
– AT hook motif DNA-binding family protein; TAIR: AT1G63470.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q8GXB3|AHL5_ARATH AT-hook motif nuclear-localized protein 5; TrEMBL-Plants: tr|O04696|O04696_PEA AT-hook motif nuclear localized protein 1; Found in the gene: LotjaGi4g1v0425400
GO terms
1
LotjaGi5g1v0090500.1
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I3SDN1|I3SDN1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0090500
GO terms
1
LotjaGi5g1v0090500.2
– AT hook motif DNA-binding family protein; TAIR: AT4G12080.1 AT-hook motif nuclear-localized protein 1; Swiss-Prot: sp|Q8VYJ2|AHL1_ARATH AT-hook motif nuclear-localized protein 1; TrEMBL-Plants: tr|I3SDN1|I3SDN1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0090500
GO terms
1
LotjaGi5g1v0183100.1
– AT hook motif DNA-binding family protein; TAIR: AT4G14465.1 AT-hook motif nuclear-localized protein 20; Swiss-Prot: sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20; TrEMBL-Plants: tr|V7BE43|V7BE43_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0183100
GO terms
1
LotjaGi5g1v0194500.1
– AT hook motif DNA-binding family protein; TAIR: AT5G62260.1 AT hook motif DNA-binding family protein; Swiss-Prot: sp|Q9LVB0|AHL6_ARATH AT-hook motif nuclear-localized protein 6; TrEMBL-Plants: tr|A0A151U5L7|A0A151U5L7_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi5g1v0194500
GO terms
1
LotjaGi5g1v0206200.1
– AT hook motif DNA-binding family protein; TAIR: AT3G04590.2 AT hook motif DNA-binding family protein; Swiss-Prot: sp|A1L4X7|AHL14_ARATH AT-hook motif nuclear-localized protein 14; TrEMBL-Plants: tr|A0A151TXP1|A0A151TXP1_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi5g1v0206200
GO terms
1
LotjaGi5g1v0206600.1
– AT hook motif DNA-binding family protein; TAIR: AT3G04570.1 AT-hook motif nuclear-localized protein 19; Swiss-Prot: sp|Q9SR17|AHL19_ARATH AT-hook motif nuclear-localized protein 19; TrEMBL-Plants: tr|I1LBS0|I1LBS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0206600
GO terms
1
LotjaGi6g1v0007100_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT4G14465.1 AT-hook motif nuclear-localized protein 20; Swiss-Prot: sp|Q8GWQ2|AHL20_ARATH AT-hook motif nuclear-localized protein 20; TrEMBL-Plants: tr|A0A151RXE6|A0A151RXE6_CAJCA Putative DNA-binding protein ESCAROLA; Found in the gene: LotjaGi6g1v0007100_LC
GO terms
1
LotjaGi6g1v0063700.1
– AT hook motif DNA-binding family protein; TAIR: AT3G55560.1 AT-hook protein of GA feedback 2; Swiss-Prot: sp|Q9M2S3|AHL15_ARATH AT-hook motif nuclear-localized protein 15; TrEMBL-Plants: tr|K7MPQ1|K7MPQ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0063700
GO terms
1
LotjaGi6g1v0180300_LC.1
– AT hook motif DNA-binding family protein; TAIR: AT5G49700.1 Putative AT-hook DNA-binding family protein; Swiss-Prot: sp|Q9LTA2|AHL17_ARATH AT-hook motif nuclear-localized protein 17; TrEMBL-Plants: tr|A0A1J7IR24|A0A1J7IR24_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0180300_LC
GO terms
1

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0003680
Molecular function AT DNA binding 1 1.85