Domain Predictions — View

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TIGR00442

Source: TIGRFAM

Description

hisS: histidine--tRNA ligase

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0004821 View details of GO:0004821 AmiGO InterPro QuickGO	Molecular function	Histidine-tRNA ligase activity	Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).	Subterm of GO:0004812
GO:0005524 View details of GO:0005524 AmiGO InterPro QuickGO	Molecular function	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.	Subterm of GO:0008144 GO:0032559 GO:0035639
GO:0006427 View details of GO:0006427 AmiGO InterPro QuickGO	Biological process	Histidyl-tRNA aminoacylation	The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. The histidyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3''-OH group of a histidine-accetping tRNA.	Subterm of GO:0006418

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4591200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histidyl-tRNA synthetase-like [Glycine max] gi\|356505252\|ref\|XP_003521406.1\|	Domains Coil G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR004154 IPR004516 IPR006195 IPR015807 MF_00127 PF03129 PF13393 PIRSF001549 PS50862 PTHR11476 PTHR11476:SF5 SSF52954 SSF55681 TIGR00442 cd00093 cd00773 mobidb-lite	20
Lj4g3v3112980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: histidine--tRNA ligase-like [Cicer arietinum] gi\|502122299\|ref\|XP_004497677.1\|	Domains G3DSA:1.20.200.10 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR001106 IPR004154 IPR004516 IPR006195 IPR008948 IPR015807 IPR033656 MF_00127 PF00221 PF03129 PF13393 PS50862 PTHR11476 PTHR11476:SF7 SSF48557 SSF52954 SSF55681 TIGR00442 cd00773 cd00859	23
LotjaGi1g1v0688700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp\|O82413\|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|I1JPP8\|I1JPP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700	Domains Coil G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR001387 IPR004154 IPR004516 IPR006195 IPR015807 IPR036621 IPR041715 MF_00127 PF03129 PF13393 PIRSF001549 PS50862 PTHR43707 PTHR43707:SF1 SSF52954 SSF55681 TIGR00442 cd00093 cd00773 mobidb-lite	23
LotjaGi1g1v0688700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histidine--tRNA ligase; TAIR: AT3G46100.1 Histidyl-tRNA synthetase 1; Swiss-Prot: sp\|O82413\|SYHM_ARATH Histidine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr\|I1JPP8\|I1JPP8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0688700	Domains Coil G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR001387 IPR004154 IPR004516 IPR006195 IPR015807 IPR036621 IPR041715 MF_00127 PF03129 PF13393 PIRSF001549 PS50862 PTHR43707 PTHR43707:SF1 SSF52954 SSF55681 TIGR00442 cd00093 cd00773 mobidb-lite	23
LotjaGi4g1v0456100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Histidine--tRNA ligase; TAIR: AT3G02760.1 Class II aaRS and biotin synthetases superfamily protein; Swiss-Prot: sp\|F4IYF8\|SYHC_ARATH Histidine--tRNA ligase, cytoplasmic; TrEMBL-Plants: tr\|A0A072VJI1\|A0A072VJI1_MEDTR Histidyl-tRNA synthetase; Found in the gene: LotjaGi4g1v0456100	Domains G3DSA:1.20.200.10 G3DSA:3.30.930.10 G3DSA:3.40.50.800 IPR001106 IPR004154 IPR006195 IPR008948 IPR015807 IPR033656 IPR036621 IPR041715 MF_00127 PF00221 PF03129 PF13393 PS50862 PTHR11476 PTHR11476:SF7 SSF48557 SSF52954 SSF55681 TIGR00442 cd00773 cd00859	24

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00859	CDD	1	20.00