Domain Predictions — View

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cd00890

Source: CDD

Description

Prefoldin

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0024149.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Aminotransferase-like protein [Oryza sativa Japonica Group] gi\|47497844\|dbj\|BAD19973.1\|	Domains Coil IPR019557 PF10536 PTHR24559 PTHR24559:SF178 cd00890 mobidb-lite	7
Lj1g3v3384740.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: epidermal growth factor receptor substrate 15-like isoform X1 [Cicer arietinum] gi\|502131051\|ref\|XP_004500858.1\|	Domains Coil G3DSA:1.10.238.10 IPR000261 IPR002048 IPR011992 PF12763 PF13202 PS50031 PS50222 PTHR11216 PTHR11216:SF72 SM00027 SM00054 SSF47473 cd00052 cd00890 mobidb-lite	17
Lj6g3v0028840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase Nek9 [Medicago truncatula] gi\|357439465\|ref\|XP_003590009.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50003 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF87 SM00064 SSF50729 SSF50985 SSF57903 TRANSMEMBRANE cd00065 cd00890 cd13365 mobidb-lite	38
LotjaGi1g1v0567200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Calcium-binding EF hand protein; TAIR: AT1G20760.1 Calcium-binding EF hand family protein; Swiss-Prot: sp\|B3LF48\|EHD2_ARATH EH domain-containing protein 2; TrEMBL-Plants: tr\|A0A0B2QIP4\|A0A0B2QIP4_GLYSO Putative calcium-binding protein; Found in the gene: LotjaGi1g1v0567200	Domains Coil G3DSA:1.10.238.10 IPR000261 IPR002048 IPR011992 PF12763 PF13202 PS50031 PS50222 PTHR11216 PTHR11216:SF137 SM00027 SM00054 SSF47473 cd00052 cd00890 mobidb-lite	17
LotjaGi4g1v0452700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kinesin-like protein; TAIR: AT1G18410.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|F4IAR2\|KN14O_ARATH Kinesin-like protein KIN-14O; TrEMBL-Plants: tr\|K7KRL0\|K7KRL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0452700	Domains Coil G3DSA:1.10.418.10 G3DSA:3.40.850.10 IPR001715 IPR001752 IPR027417 IPR027640 IPR036872 IPR036961 PF00225 PF00307 PR00380 PS50021 PS50067 PTHR24115 PTHR24115:SF862 SM00033 SM00129 SSF47576 SSF52540 cd00890 mobidb-lite	22
LotjaGi4g1v0452700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Kinesin-like protein; TAIR: AT1G18410.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp\|F4IAR2\|KN14O_ARATH Kinesin-like protein KIN-14O; TrEMBL-Plants: tr\|K7KRL0\|K7KRL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0452700	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.418.10 G3DSA:3.40.850.10 IPR001715 IPR001752 IPR027417 IPR027640 IPR031852 IPR036872 IPR036961 NON_CYTOPLASMIC_DOMAIN PF00307 PF16796 PS50021 PS50067 PTHR24115 PTHR24115:SF864 SM00033 SM00129 SSF47576 SSF52540 TMhelix TRANSMEMBRANE cd00890 mobidb-lite	26
LotjaGi5g1v0210600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Myosin; TAIR: AT1G54560.2 Myosin family protein with Dil domain-containing protein; Swiss-Prot: sp\|F4HWY6\|MYO11_ARATH Myosin-11; TrEMBL-Plants: tr\|I1NIS2\|I1NIS2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0210600	Domains Coil G3DSA:1.10.10.820 G3DSA:1.20.120.720 G3DSA:1.20.5.190 G3DSA:1.20.58.530 G3DSA:3.30.70.3240 G3DSA:3.40.850.10 IPR000048 IPR001609 IPR002710 IPR004009 IPR027417 IPR036018 IPR036961 IPR037975 PF00063 PF00612 PF01843 PF02736 PR00193 PS50096 PS51126 PS51456 PS51844 PTHR13140 PTHR13140:SF754 SM00015 SM00242 SM01132 SSF52540 cd00890 cd01384 cd15475 mobidb-lite	34
LotjaGi5g1v0305000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp\|P93736\|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A151U9X6\|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000	Domains Coil G3DSA:1.10.730.10 G3DSA:3.40.50.620 G3DSA:3.90.740.10 IPR001412 IPR002300 IPR002303 IPR009008 IPR009080 IPR013155 IPR014729 IPR033705 MF_02004 PF00133 PF08264 PR00986 PS00178 PTHR11946 PTHR11946:SF94 SSF47323 SSF50677 SSF52374 TIGR00422 cd00817 cd00890 cd07962 mobidb-lite	27
LotjaGi5g1v0305000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp\|P93736\|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A151U9X6\|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000	Domains Coil G3DSA:1.10.730.10 G3DSA:3.40.50.620 G3DSA:3.90.740.10 IPR001412 IPR002300 IPR002303 IPR009008 IPR009080 IPR013155 IPR014729 IPR033705 MF_02004 PF00133 PF08264 PR00986 PS00178 PTHR11946 PTHR11946:SF94 SSF47323 SSF50677 SSF52374 TIGR00422 cd00817 cd00890 cd07962 mobidb-lite	27
LotjaGi5g1v0305000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp\|P93736\|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A151U9X6\|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000	Domains Coil G3DSA:1.10.730.10 G3DSA:3.40.50.620 G3DSA:3.90.740.10 IPR001412 IPR002300 IPR002303 IPR009008 IPR009080 IPR013155 IPR014729 IPR033705 MF_02004 NON_CYTOPLASMIC_DOMAIN PF00133 PF08264 PR00986 PS00178 PTHR11946 PTHR11946:SF94 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF47323 SSF50677 SSF52374 SignalP-TM TIGR00422 cd00817 cd00890 cd07962 mobidb-lite	33
LotjaGi5g1v0305000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Valine--tRNA ligase; TAIR: AT1G14610.1 valyl-tRNA synthetase / valine-tRNA ligase (VALRS); Swiss-Prot: sp\|P93736\|SYVM1_ARATH Valine--tRNA ligase, mitochondrial 1; TrEMBL-Plants: tr\|A0A151U9X6\|A0A151U9X6_CAJCA Valyl-tRNA synthetase; Found in the gene: LotjaGi5g1v0305000	Domains Coil G3DSA:1.10.730.10 G3DSA:3.40.50.620 G3DSA:3.90.740.10 IPR001412 IPR002300 IPR002303 IPR009008 IPR009080 IPR013155 IPR014729 IPR033705 MF_02004 PF00133 PF08264 PR00986 PS00178 PTHR11946 PTHR11946:SF94 SSF47323 SSF50677 SSF52374 TIGR00422 cd00817 cd00890 cd07962	26

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd07962	CDD	1	9.09