Domain Predictions — View

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PF16457

Source: Pfam

Description

Pleckstrin homology domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 22

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0274529.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis sativus] gi\|449522972\|ref\|XP_004168499.1\|	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR017455 PF00415 PF01363 PF16457 PR00633 PS00626 PS50012 PS50178 PTHR22870 PTHR22870:SF187 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	27
Lj0g3v0311279.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cicer arietinum] gi\|502119064\|ref\|XP_004496492.1\|	Domains G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR017455 PF00415 PF01363 PF16457 PR00633 PS00626 PS50012 PS50178 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	26
Lj2g3v3055310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Lateral signaling target protein-like protein [Medicago truncatula] gi\|357493985\|ref\|XP_003617281.1\|	Domains G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR017455 PF00415 PF01363 PF16457 PR00633 PS00626 PS50012 PS50178 PTHR22870 PTHR22870:SF219 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	27
Lj5g3v1959100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cicer arietinum] gi\|502119064\|ref\|XP_004496492.1\|	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	32
Lj6g3v0028840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase Nek9 [Medicago truncatula] gi\|357439465\|ref\|XP_003590009.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50003 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF87 SM00064 SSF50729 SSF50985 SSF57903 TRANSMEMBRANE cd00065 cd00890 cd13365 mobidb-lite	38
Lj6g3v0391170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RCC1 and BTB domain-containing protein [Medicago truncatula] gi\|357460713\|ref\|XP_003600638.1\|	Domains G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR017455 PF00415 PF01363 PF16457 PR00633 PS00626 PS50012 PS50178 PTHR22870 PTHR22870:SF177 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	27
Lj6g3v0948300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain isoform 1 [Theobroma cacao] gi\|508785674\|gb\|EOY32930.1\|	Domains G3DSA:2.130.10.30 G3DSA:2.30.29.30 IPR000408 IPR001849 IPR009091 IPR011993 PF00415 PF16457 PR00633 PS00626 PS50012 PTHR22870 PTHR22870:SF219 SSF50729 SSF50985 cd13365 mobidb-lite	17
LotjaGi1g1v0049200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1M739\|I1M739_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	34
LotjaGi1g1v0049200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|G7K368\|G7K368_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	34
LotjaGi1g1v0452300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|G7KX16\|G7KX16_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0452300	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF352 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|A0A0S3TAW6\|A0A0S3TAW6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1JDG4\|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1JDG4\|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|K7K743\|K7K743_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF355 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi4g1v0185000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT1G69710.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|K7L9S7\|K7L9S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0185000	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF358 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	32
LotjaGi5g1v0293400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|V7BF38\|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	32
LotjaGi6g1v0005200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|G7I4N4\|G7I4N4_MEDTR Chromosome condensation regulator RCC1 repeat protein; Found in the gene: LotjaGi6g1v0005200	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50003 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF352 SM00064 SSF50729 SSF50985 SSF57903 TRANSMEMBRANE cd00065 cd13365 mobidb-lite	37
LotjaGi6g1v0052200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT1G65920.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q9VR91\|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2; TrEMBL-Plants: tr\|A0A0S3S5P3\|A0A0S3S5P3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0052200	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 PF00415 PF01363 PF08381 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF350 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	31
LotjaGi6g1v0181100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	34
LotjaGi6g1v0181100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	40
LotjaGi6g1v0181100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	40
LotjaGi6g1v0181100.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	40

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	4.55