Domain Predictions — View

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IPR027988

Source: InterPro

Description

IPR027988 is a Transcription factor BREVIS RADIX, N-terminal domain.

<p>This entry represents the N-terminal α-helical domain of the BREVIS RADIX (BRX), which was characterised as being a transcription factor in plants regulating the extent of cell proliferation and elongation in the growth zone of the root [[cite:PUB00067469], [cite:PUB00054173]]. BRX maintains a rate-limiting brassinosteroid biosynthesis enzyme expression to keep brassinosteroid biosynthesis above a critical threshold [[cite:PUB00067474]]. BRX has a ubiquitous, although quantitatively variable role in modulating the growth rate in both the root and the shoot [[cite:PUB00067468]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 35

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0228699.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein BREVIS RADIX-like [Glycine max] gi\|356559081\|ref\|XP_003547830.1\|	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR22870 mobidb-lite	7
Lj3g3v2645610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein Brevis radix-like 2-like [Glycine max] gi\|356519574\|ref\|XP_003528447.1\|	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR22870 PTHR22870:SF190 mobidb-lite	8
Lj4g3v2179280.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: protein Brevis radix-like 4-like [Glycine max] gi\|356547921\|ref\|XP_003542353.1\|	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR22870 PTHR22870:SF166 mobidb-lite	8
Lj5g3v1959100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cicer arietinum] gi\|502119064\|ref\|XP_004496492.1\|	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	32
Lj6g3v0028840.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Serine/threonine protein kinase Nek9 [Medicago truncatula] gi\|357439465\|ref\|XP_003590009.1\|	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50003 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF87 SM00064 SSF50729 SSF50985 SSF57903 TRANSMEMBRANE cd00065 cd00890 cd13365 mobidb-lite	38
LotjaGi1g1v0049200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1M739\|I1M739_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	34
LotjaGi1g1v0049200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q9FN03\|UVR8_ARATH Ultraviolet-B receptor UVR8; TrEMBL-Plants: tr\|A0A0B2PRJ1\|A0A0B2PRJ1_GLYSO Putative E3 ubiquitin-protein ligase HERC1; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50985 SSF57903 cd00065 mobidb-lite	28
LotjaGi1g1v0049200.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q9FN03\|UVR8_ARATH Ultraviolet-B receptor UVR8; TrEMBL-Plants: tr\|A0A0B2PRJ1\|A0A0B2PRJ1_GLYSO Putative E3 ubiquitin-protein ligase HERC1; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50985 SSF57903 cd00065 mobidb-lite	28
LotjaGi1g1v0049200.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|G7K368\|G7K368_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	34
LotjaGi1g1v0049200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.2 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q9FN03\|UVR8_ARATH Ultraviolet-B receptor UVR8; TrEMBL-Plants: tr\|A0A0B2PRJ1\|A0A0B2PRJ1_GLYSO Putative E3 ubiquitin-protein ligase HERC1; Found in the gene: LotjaGi1g1v0049200	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50985 SSF57903 cd00065 mobidb-lite	28
LotjaGi1g1v0452300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|G7KX16\|G7KX16_MEDTR Regulator of chromosome condensation (RCC1) family protein; Found in the gene: LotjaGi1g1v0452300	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF352 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|A0A0S3TAW6\|A0A0S3TAW6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1JDG4\|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1JDG4\|I1JDG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi2g1v0134600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|K7K743\|K7K743_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0134600	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF355 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	33
LotjaGi3g1v0416900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Brevis radix-like protein; TAIR: AT3G14000.1 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein; Swiss-Prot: sp\|Q8GYL9\|BRXL2_ARATH Protein Brevis radix-like 2; TrEMBL-Plants: tr\|A0A072TLT2\|A0A072TLT2_MEDTR Brevis radix-like protein; Found in the gene: LotjaGi3g1v0416900	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF12 mobidb-lite	8
LotjaGi3g1v0416900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Brevis radix-like protein; TAIR: AT3G14000.1 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein; Swiss-Prot: sp\|Q8GYL9\|BRXL2_ARATH Protein Brevis radix-like 2; TrEMBL-Plants: tr\|A0A072TLT2\|A0A072TLT2_MEDTR Brevis radix-like protein; Found in the gene: LotjaGi3g1v0416900	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF12 mobidb-lite	8
LotjaGi4g1v0145500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein BREVIS RADIX; TAIR: AT1G31880.2 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein; Swiss-Prot: sp\|Q17TI5\|BRX_ARATH Protein BREVIS RADIX; TrEMBL-Plants: tr\|K7MGD2\|K7MGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0145500	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF9 mobidb-lite	8
LotjaGi4g1v0145500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein BREVIS RADIX; TAIR: AT1G31880.1 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein; Swiss-Prot: sp\|Q17TI5\|BRX_ARATH Protein BREVIS RADIX; TrEMBL-Plants: tr\|K7MGD2\|K7MGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0145500	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF9 mobidb-lite	8
LotjaGi4g1v0145500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein BREVIS RADIX; TAIR: AT1G31880.2 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein; Swiss-Prot: sp\|Q17TI5\|BRX_ARATH Protein BREVIS RADIX; TrEMBL-Plants: tr\|K7MGD2\|K7MGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0145500	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF9 mobidb-lite	8
LotjaGi4g1v0145500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Protein BREVIS RADIX; TAIR: AT1G31880.2 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein; Swiss-Prot: sp\|Q17TI5\|BRX_ARATH Protein BREVIS RADIX; TrEMBL-Plants: tr\|K7MGD2\|K7MGD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0145500	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF9 mobidb-lite	8
LotjaGi4g1v0185000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT1G69710.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|K7L9S7\|K7L9S7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0185000	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF358 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	32
LotjaGi4g1v0327400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Brevis radix-like protein; TAIR: AT5G20540.1 BREVIS RADIX-like 4; Swiss-Prot: sp\|Q8GZ92\|BRXL4_ARATH Protein Brevis radix-like 4; TrEMBL-Plants: tr\|K7LYZ0\|K7LYZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0327400	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF3 mobidb-lite	8
LotjaGi4g1v0327400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Brevis radix-like protein; TAIR: AT5G20540.1 BREVIS RADIX-like 4; Swiss-Prot: sp\|Q8GZ92\|BRXL4_ARATH Protein Brevis radix-like 4; TrEMBL-Plants: tr\|K7LYZ0\|K7LYZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0327400	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF3 mobidb-lite	8
LotjaGi5g1v0293400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|V7BF38\|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50729 SSF50985 SSF57903 cd13365 mobidb-lite	32
LotjaGi5g1v0293400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q17TI5\|BRX_ARATH Protein BREVIS RADIX; TrEMBL-Plants: tr\|V7BF38\|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50985 SSF57903 cd00065 mobidb-lite	25
LotjaGi5g1v0293400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; TAIR: AT5G42140.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|V7BF38\|V7BF38_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0293400	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF91 SM00064 SSF50985 SSF57903 mobidb-lite	26
LotjaGi6g1v0005200.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family protein; TAIR: AT4G14368.2 Regulator of chromosome condensation (RCC1) family protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|G7I4N4\|G7I4N4_MEDTR Chromosome condensation regulator RCC1 repeat protein; Found in the gene: LotjaGi6g1v0005200	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PR00633 PS00626 PS50003 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF352 SM00064 SSF50729 SSF50985 SSF57903 TRANSMEMBRANE cd00065 cd13365 mobidb-lite	37
LotjaGi6g1v0181100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SM00064 SSF50729 SSF50985 SSF57903 cd00065 cd13365 mobidb-lite	34
LotjaGi6g1v0181100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1KXU8\|I1KXU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50985 SSF57903 cd00065 mobidb-lite	33
LotjaGi6g1v0181100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	40
LotjaGi6g1v0181100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	40
LotjaGi6g1v0181100.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|K7MRH4\|K7MRH4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR009091 IPR011011 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	36
LotjaGi6g1v0181100.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; TAIR: AT5G19420.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein; Swiss-Prot: sp\|Q15751\|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1; TrEMBL-Plants: tr\|I1N146\|I1N146_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0181100	Domains Coil G3DSA:2.130.10.30 G3DSA:2.30.29.30 G3DSA:3.30.40.10 IPR000306 IPR000408 IPR001849 IPR009091 IPR011011 IPR011993 IPR013083 IPR013591 IPR017455 IPR027988 NON_CYTOPLASMIC_DOMAIN PF00415 PF01363 PF08381 PF13713 PF16457 PF16627 PR00633 PS00626 PS50012 PS50178 PS51514 PTHR22870 PTHR22870:SF374 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00064 SSF50729 SSF50985 SSF57903 SignalP-noTM cd00065 cd13365 mobidb-lite	40
LotjaGi6g1v0227200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Brevis radix-like protein; TAIR: AT5G20540.1 BREVIS RADIX-like 4; Swiss-Prot: sp\|Q8GZ92\|BRXL4_ARATH Protein Brevis radix-like 4; TrEMBL-Plants: tr\|K7LYZ0\|K7LYZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0227200	Domains IPR013591 IPR027988 PF08381 PF13713 PS51514 PTHR46058 PTHR46058:SF3 mobidb-lite	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	2.86