Domain Predictions — View

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cd16291

Source: CDD

Description

INTS11-like_MBL-fold

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0255900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|A0A072VR63\|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi1g1v0255900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|A0A072VR63\|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi1g1v0255900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|A0A072VR63\|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi1g1v0255900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|A0A072VR63\|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi2g1v0072300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|V7C7J5\|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072300	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi2g1v0072300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|V7C7J5\|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072300	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi5g1v0053100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|V7C7J5\|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi5g1v0053100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|V7C7J5\|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16
LotjaGi5g1v0053100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp\|Q8GUU3\|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr\|V7C7J5\|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100	Domains G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR036866 IPR041897 PF07521 PF10996 PF16661 PTHR11203 PTHR11203:SF37 SM00849 SM01027 SSF56281 cd16291	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16291	CDD	1	11.11