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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3171130 |
| Transcript ID | Lj1g3v3171130.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like [Glycine max] gi|356499695|ref|XP_003518672.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | – | – | |
| SignalP | 1 | 20 | 20 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| PANTHER | 7 | 584 | 578 | 0 | – | |
| PANTHER | 7 | 584 | 578 | 0 | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 616 | 596 | – | – | |
| Pfam | 30 | 69 | 40 | 5.00E-11 | ||
| Gene3D | 32 | 250 | 219 | 1.10E-57 | ||
| SUPERFAMILY | 46 | 387 | 342 | 3.40E-57 | ||
| SMART | 96 | 120 | 25 | 77 | ||
| Pfam | 98 | 156 | 59 | 4.40E-08 | ||
| SMART | 144 | 168 | 25 | 160 | ||
| SMART | 218 | 242 | 25 | 230 | ||
| Gene3D | 251 | 357 | 107 | 9.30E-20 | ||
| Pfam | 266 | 282 | 17 | 1.5 | ||
| SMART | 290 | 314 | 25 | 120 | ||
| SUPERFAMILY | 299 | 562 | 264 | 4.42E-50 | ||
| Gene3D | 364 | 569 | 206 | 1.90E-43 | ||
| SMART | 410 | 434 | 25 | 320 | ||
| SMART | 435 | 459 | 25 | 73 | ||
| Pfam | 461 | 520 | 60 | 1.30E-07 | ||
| SMART | 531 | 556 | 26 | 210 | ||
| MobiDBLite | 591 | 610 | 20 | – | – | |
| PANTHER | 610 | 974 | 365 | 0 | – | |
| PANTHER | 610 | 974 | 365 | 0 | – | |
| Phobius | 617 | 642 | 26 | – | – | |
| TMHMM | 622 | 644 | 23 | – | – | |
| Phobius | 643 | 992 | 350 | – | – | |
| Gene3D | 681 | 777 | 97 | 6.60E-17 | – | |
| ProSiteProfiles | 696 | 977 | 282 | 36.033 | ||
| SUPERFAMILY | 697 | 983 | 287 | 4.16E-68 | ||
| Pfam | 698 | 972 | 275 | 9.20E-41 | ||
| ProSitePatterns | 702 | 730 | 29 | – | ||
| CDD | 702 | 975 | 274 | 1.27E-92 | – | |
| Gene3D | 780 | 977 | 198 | 9.80E-41 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj1g3v3171130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3171130.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.