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| Field | Value |
|---|---|
| Gene ID | Lj1g3v3751710 |
| Transcript ID | Lj1g3v3751710.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: succinate dehydrogenase [ubiquinone] gi|502089528|ref|XP_004488937.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 14 | 14 | – | – | |
| PANTHER | 22 | 273 | 252 | 6.50E-183 | – | |
| PANTHER | 22 | 273 | 252 | 6.50E-183 | – | |
| Gene3D | 39 | 147 | 109 | 4.60E-42 | ||
| SUPERFAMILY | 45 | 147 | 103 | 4.16E-31 | ||
| Pfam | 48 | 152 | 105 | 9.80E-33 | ||
| TIGRFAM | 51 | 272 | 222 | 2.00E-82 | ||
| ProSiteProfiles | 60 | 138 | 79 | 9.404 | ||
| CDD | 62 | 112 | 51 | 0.00199154 | ||
| ProSitePatterns | 99 | 107 | 9 | – | ||
| SUPERFAMILY | 148 | 273 | 126 | 1.59E-35 | ||
| Gene3D | 148 | 275 | 128 | 5.00E-52 | – | |
| ProSiteProfiles | 181 | 211 | 31 | 7.76 | ||
| Pfam | 190 | 259 | 70 | 4.30E-08 | ||
| ProSitePatterns | 191 | 202 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Tricarboxylic acid cycle | A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle. | ||
| Molecular function | Electron transfer activity | Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Molecular function | 2 iron, 2 sulfur cluster binding | Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj1g3v3751710.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v3751710.2, powered by CORGI.
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