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| Field | Value |
|---|---|
| Gene ID | Lj2g3v0852080 |
| Transcript ID | Lj2g3v0852080.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor-like protein kinase HSL1-like [Glycine max] gi|356495853|ref|XP_003516786.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| SignalP | 1 | 28 | 28 | – | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| PANTHER | 11 | 273 | 263 | 0 | – | |
| PANTHER | 11 | 273 | 263 | 0 | – | |
| TMHMM | 13 | 35 | 23 | – | – | |
| Phobius | 14 | 23 | 10 | – | – | |
| Phobius | 24 | 28 | 5 | – | – | |
| Phobius | 29 | 647 | 619 | – | – | |
| Pfam | 36 | 73 | 38 | 1.10E-05 | ||
| SUPERFAMILY | 36 | 289 | 254 | 1.09E-48 | ||
| Gene3D | 37 | 288 | 252 | 8.80E-58 | ||
| Pfam | 101 | 160 | 60 | 2.20E-07 | ||
| ProSiteProfiles | 125 | 147 | 23 | 6.156 | ||
| SMART | 147 | 171 | 25 | 48 | ||
| ProSiteProfiles | 149 | 171 | 23 | 5.055 | ||
| SMART | 245 | 269 | 25 | 11 | ||
| ProSiteProfiles | 247 | 270 | 24 | 5.486 | ||
| ProSiteProfiles | 271 | 293 | 23 | 4.986 | ||
| SUPERFAMILY | 293 | 613 | 321 | 7.14E-56 | – | |
| Pfam | 294 | 316 | 23 | 0.18 | ||
| Gene3D | 294 | 507 | 214 | 2.00E-52 | ||
| ProSiteProfiles | 294 | 317 | 24 | 7.111 | ||
| PRINTS | 295 | 308 | 14 | 1.80E-05 | – | |
| PANTHER | 303 | 721 | 419 | 0 | – | |
| PANTHER | 303 | 721 | 419 | 0 | – | |
| SMART | 316 | 340 | 25 | 39 | ||
| ProSiteProfiles | 318 | 340 | 23 | 5.764 | ||
| ProSiteProfiles | 460 | 482 | 23 | 4.647 | ||
| Gene3D | 508 | 608 | 101 | 6.60E-21 | ||
| SMART | 513 | 537 | 25 | 37 | ||
| Pfam | 514 | 574 | 61 | 5.40E-09 | ||
| ProSiteProfiles | 515 | 536 | 22 | 4.686 | ||
| ProSiteProfiles | 539 | 561 | 23 | 7.219 | ||
| PRINTS | 561 | 574 | 14 | 1.80E-05 | – | |
| ProSiteProfiles | 563 | 585 | 23 | 6.719 | ||
| SMART | 584 | 607 | 24 | 58 | ||
| ProSiteProfiles | 586 | 608 | 23 | 5.995 | ||
| Phobius | 648 | 672 | 25 | – | – | |
| TMHMM | 650 | 672 | 23 | – | – | |
| Phobius | 673 | 748 | 76 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj2g3v0852080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v0852080.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.