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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1560730 |
| Transcript ID | Lj2g3v1560730.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum] gi|502162249|ref|XP_004512441.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 538 | 538 | – | – | |
| Gene3D | 6 | 220 | 215 | 1.20E-44 | ||
| SUPERFAMILY | 7 | 296 | 290 | 6.28E-43 | – | |
| PANTHER | 7 | 206 | 200 | 0 | – | |
| PANTHER | 7 | 206 | 200 | 0 | – | |
| SMART | 11 | 35 | 25 | 59 | ||
| ProSiteProfiles | 13 | 36 | 24 | 5.148 | ||
| ProSiteProfiles | 37 | 60 | 24 | 4.693 | ||
| SMART | 59 | 83 | 25 | 32 | ||
| ProSiteProfiles | 61 | 83 | 23 | 4.508 | ||
| ProSiteProfiles | 85 | 107 | 23 | 5.471 | ||
| SMART | 156 | 180 | 25 | 72 | ||
| ProSiteProfiles | 158 | 180 | 23 | 4.809 | ||
| ProSiteProfiles | 210 | 231 | 22 | 5.356 | ||
| PANTHER | 248 | 842 | 595 | 0 | – | |
| PANTHER | 248 | 842 | 595 | 0 | – | |
| ProSiteProfiles | 260 | 282 | 23 | 4.932 | ||
| Gene3D | 262 | 514 | 253 | 1.60E-71 | ||
| SUPERFAMILY | 263 | 514 | 252 | 1.45E-61 | ||
| SMART | 282 | 305 | 24 | 350 | ||
| Pfam | 289 | 343 | 55 | 9.10E-07 | ||
| SMART | 306 | 330 | 25 | 210 | ||
| ProSiteProfiles | 308 | 330 | 23 | 4.994 | ||
| ProSiteProfiles | 332 | 354 | 23 | 4.609 | ||
| SMART | 354 | 378 | 25 | 54 | ||
| ProSiteProfiles | 356 | 378 | 23 | 7.535 | ||
| SMART | 403 | 427 | 25 | 130 | ||
| ProSiteProfiles | 405 | 427 | 23 | 4.824 | ||
| ProSiteProfiles | 429 | 452 | 24 | 6.079 | ||
| Pfam | 429 | 488 | 60 | 1.40E-07 | ||
| SMART | 451 | 474 | 24 | 19 | ||
| ProSiteProfiles | 453 | 476 | 24 | 6.118 | ||
| SMART | 475 | 500 | 26 | 380 | ||
| Gene3D | 528 | 601 | 74 | 1.40E-10 | ||
| Phobius | 539 | 561 | 23 | – | – | |
| TMHMM | 539 | 561 | 23 | – | – | |
| Phobius | 562 | 909 | 348 | – | – | |
| SUPERFAMILY | 568 | 895 | 328 | 3.01E-69 | ||
| SMART | 594 | 899 | 306 | 7.30E-31 | ||
| ProSiteProfiles | 594 | 899 | 306 | 35.283 | ||
| Pfam | 599 | 861 | 263 | 2.40E-41 | ||
| ProSitePatterns | 600 | 623 | 24 | – | ||
| CDD | 600 | 895 | 296 | 1.02E-84 | – | |
| Gene3D | 602 | 680 | 79 | 1.10E-19 | – | |
| Gene3D | 681 | 900 | 220 | 2.50E-37 | – | |
| ProSitePatterns | 723 | 735 | 13 | – | ||
| PANTHER | 861 | 892 | 32 | 0 | – | |
| PANTHER | 861 | 892 | 32 | 0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj2g3v1560730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1560730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.