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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0937760 |
| Transcript ID | Lj3g3v0937760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: CTP synthase-like isoform 1 [Glycine max] gi|356525714|ref|XP_003531468.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 547 | 547 | 0 | ||
| Phobius | 1 | 3 | 3 | – | – | |
| Gene3D | 1 | 291 | 291 | 2.00E-141 | ||
| PANTHER | 1 | 547 | 547 | 0 | – | |
| TIGRFAM | 1 | 545 | 545 | 6.70E-225 | ||
| ProSiteProfiles | 1 | 30 | 30 | 5 | – | |
| SUPERFAMILY | 1 | 272 | 272 | 8.27E-121 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| Hamap | 1 | 547 | 547 | 45.126 | ||
| Pfam | 2 | 272 | 271 | 1.10E-125 | ||
| CDD | 2 | 260 | 259 | 6.56E-152 | – | |
| Phobius | 4 | 15 | 12 | – | – | |
| Phobius | 16 | 20 | 5 | – | – | |
| Phobius | 21 | 547 | 527 | – | – | |
| Gene3D | 295 | 547 | 253 | 5.70E-102 | ||
| SUPERFAMILY | 296 | 546 | 251 | 2.93E-71 | ||
| CDD | 298 | 543 | 246 | 3.43E-140 | ||
| ProSiteProfiles | 299 | 547 | 249 | 22.939 | ||
| Pfam | 309 | 544 | 236 | 1.80E-59 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | CTP synthase activity | Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP. | ||
| Biological process | Pyrimidine nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. | ||
| Biological process | CTP biosynthetic process | The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate. |
Expression pattern of Lj3g3v0937760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0937760.1, powered by CORGI.
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