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| Field | Value |
|---|---|
| Gene ID | Lj3g3v0999850 |
| Transcript ID | Lj3g3v0999850.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230-like [Glycine max] gi|356555150|ref|XP_003545899.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 737 | 737 | – | – | |
| PANTHER | 17 | 115 | 99 | 0 | – | |
| PANTHER | 17 | 115 | 99 | 0 | – | |
| Pfam | 28 | 66 | 39 | 3.10E-11 | ||
| Gene3D | 29 | 291 | 263 | 2.80E-64 | ||
| SUPERFAMILY | 29 | 298 | 270 | 1.29E-56 | ||
| ProSiteProfiles | 75 | 96 | 22 | 5.571 | ||
| PANTHER | 151 | 206 | 56 | 0 | – | |
| PANTHER | 151 | 206 | 56 | 0 | – | |
| SMART | 164 | 188 | 25 | 110 | ||
| ProSiteProfiles | 166 | 189 | 24 | 5.055 | ||
| ProSiteProfiles | 214 | 237 | 24 | 5.91 | ||
| SMART | 236 | 260 | 25 | 160 | ||
| ProSiteProfiles | 238 | 260 | 23 | 4.832 | ||
| PANTHER | 238 | 380 | 143 | 0 | – | |
| PANTHER | 238 | 380 | 143 | 0 | – | |
| SUPERFAMILY | 252 | 562 | 311 | 2.82E-63 | – | |
| SMART | 284 | 308 | 25 | 69 | ||
| Gene3D | 295 | 460 | 166 | 1.30E-37 | ||
| ProSiteProfiles | 334 | 357 | 24 | 5.048 | ||
| SMART | 356 | 379 | 24 | 58 | ||
| ProSiteProfiles | 358 | 379 | 22 | 7.073 | ||
| SMART | 404 | 428 | 25 | 76 | ||
| ProSiteProfiles | 406 | 427 | 22 | 5.633 | ||
| ProSiteProfiles | 430 | 453 | 24 | 5.286 | ||
| PANTHER | 443 | 1075 | 633 | 0 | – | |
| PANTHER | 443 | 1075 | 633 | 0 | – | |
| ProSiteProfiles | 454 | 476 | 23 | 4.716 | ||
| Gene3D | 461 | 707 | 247 | 1.90E-67 | ||
| SUPERFAMILY | 497 | 689 | 193 | 5.27E-40 | ||
| SMART | 500 | 524 | 25 | 33 | ||
| ProSiteProfiles | 502 | 524 | 23 | 5.171 | ||
| SMART | 548 | 571 | 24 | 300 | ||
| ProSiteProfiles | 550 | 572 | 23 | 5.64 | ||
| Pfam | 550 | 572 | 23 | 0.74 | ||
| SMART | 572 | 596 | 25 | 90 | ||
| ProSiteProfiles | 574 | 597 | 24 | 4.701 | ||
| SMART | 620 | 644 | 25 | 370 | ||
| ProSiteProfiles | 622 | 646 | 25 | 5.887 | ||
| SMART | 645 | 669 | 25 | 15 | ||
| ProSiteProfiles | 647 | 669 | 23 | 5.194 | ||
| Gene3D | 731 | 815 | 85 | 1.10E-07 | ||
| Phobius | 738 | 761 | 24 | – | – | |
| TMHMM | 738 | 760 | 23 | – | – | |
| Phobius | 762 | 1105 | 344 | – | – | |
| SUPERFAMILY | 779 | 1075 | 297 | 1.89E-77 | ||
| ProSiteProfiles | 802 | 1082 | 281 | 40.315 | ||
| SMART | 802 | 1082 | 281 | 1.10E-40 | ||
| Pfam | 803 | 1072 | 270 | 6.90E-48 | ||
| Gene3D | 816 | 866 | 51 | 4.20E-22 | – | |
| Gene3D | 867 | 1075 | 209 | 1.20E-43 | – | |
| ProSitePatterns | 925 | 937 | 13 | – | ||
| MobiDBLite | 1083 | 1105 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj3g3v0999850.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v0999850.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.