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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1983460 |
| Transcript ID | Lj4g3v1983460.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Glycine max] gi|356562577|ref|XP_003549546.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 22 | 22 | – | – | |
| Phobius | 3 | 14 | 12 | – | – | |
| PANTHER | 9 | 634 | 626 | 0 | – | |
| PANTHER | 9 | 634 | 626 | 0 | – | |
| Phobius | 15 | 22 | 8 | – | – | |
| Phobius | 23 | 458 | 436 | – | – | |
| Gene3D | 48 | 264 | 217 | 9.20E-53 | ||
| SUPERFAMILY | 48 | 419 | 372 | 2.30E-61 | ||
| Pfam | 82 | 126 | 45 | 1.50E-09 | ||
| SMART | 90 | 112 | 23 | 0.33 | ||
| ProSiteProfiles | 92 | 113 | 22 | 7.558 | ||
| PRINTS | 93 | 106 | 14 | 7.70E-05 | – | |
| PRINTS | 113 | 126 | 14 | 7.70E-05 | – | |
| SMART | 113 | 137 | 25 | 17 | ||
| ProSiteProfiles | 115 | 127 | 13 | 5.748 | ||
| ProSiteProfiles | 139 | 162 | 24 | 5.132 | ||
| SMART | 161 | 185 | 25 | 0.48 | ||
| ProSiteProfiles | 163 | 185 | 23 | 5.502 | ||
| ProSiteProfiles | 187 | 209 | 23 | 4.909 | ||
| ProSiteProfiles | 212 | 234 | 23 | 5.563 | ||
| Gene3D | 265 | 416 | 152 | 7.00E-30 | ||
| ProSiteProfiles | 285 | 305 | 21 | 6.026 | ||
| ProSiteProfiles | 309 | 332 | 24 | 6.757 | ||
| SMART | 331 | 355 | 25 | 34 | ||
| ProSiteProfiles | 333 | 355 | 23 | 5.356 | ||
| ProSiteProfiles | 357 | 378 | 22 | 5.517 | ||
| Pfam | 377 | 392 | 16 | 0.065 | ||
| SMART | 378 | 401 | 24 | 120 | ||
| ProSiteProfiles | 379 | 400 | 22 | 7.196 | ||
| Gene3D | 448 | 556 | 109 | 2.10E-05 | ||
| TMHMM | 459 | 481 | 23 | – | – | |
| Phobius | 459 | 481 | 23 | – | – | |
| Phobius | 482 | 856 | 375 | – | – | |
| SUPERFAMILY | 534 | 635 | 102 | 3.03E-60 | ||
| ProSiteProfiles | 548 | 854 | 307 | 32.061 | ||
| Pfam | 552 | 846 | 295 | 1.70E-30 | ||
| Gene3D | 557 | 625 | 69 | 2.40E-17 | – | |
| PANTHER | 652 | 847 | 196 | 0 | – | |
| PANTHER | 652 | 847 | 196 | 0 | – | |
| SUPERFAMILY | 664 | 849 | 186 | 3.03E-60 | ||
| Gene3D | 670 | 844 | 175 | 2.70E-31 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj4g3v1983460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1983460.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.