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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0196810 |
| Transcript ID | Lj5g3v0196810.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK-like [Glycine max] gi|356511425|ref|XP_003524427.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 1 | 21 | 21 | – | – | |
| SignalP | 1 | 21 | 21 | – | – | |
| Phobius | 3 | 16 | 14 | – | – | |
| PANTHER | 7 | 622 | 616 | 0 | – | |
| PANTHER | 7 | 622 | 616 | 0 | – | |
| Phobius | 17 | 21 | 5 | – | – | |
| Pfam | 22 | 66 | 45 | 2.40E-09 | ||
| Phobius | 22 | 238 | 217 | – | – | |
| SUPERFAMILY | 24 | 216 | 193 | 1.93E-29 | ||
| Gene3D | 25 | 212 | 188 | 1.70E-35 | ||
| Pfam | 118 | 178 | 61 | 8.00E-11 | ||
| Gene3D | 230 | 345 | 116 | 9.90E-04 | ||
| TMHMM | 239 | 261 | 23 | – | – | |
| Phobius | 239 | 261 | 23 | – | – | |
| Phobius | 262 | 644 | 383 | – | – | |
| MobiDBLite | 270 | 310 | 41 | – | – | |
| ProSiteProfiles | 333 | 616 | 284 | 25.672 | ||
| Pfam | 336 | 601 | 266 | 6.80E-30 | ||
| SUPERFAMILY | 337 | 606 | 270 | 1.04E-47 | ||
| Gene3D | 346 | 395 | 50 | 3.40E-10 | – | |
| Gene3D | 396 | 631 | 236 | 6.70E-29 | – | |
| MobiDBLite | 622 | 644 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v0196810.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0196810.1, powered by CORGI.
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