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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2113420 |
| Transcript ID | Lj5g3v2113420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: receptor protein kinase-like protein At4g34220-like, partial [Glycine max] gi|356536160|ref|XP_003536607.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 196 | 196 | 0 | – | |
| PANTHER | 1 | 196 | 196 | 0 | – | |
| SignalP | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 26 | 26 | – | – | |
| Phobius | 1 | 13 | 13 | – | – | |
| Phobius | 14 | 22 | 9 | – | – | |
| Phobius | 23 | 26 | 4 | – | – | |
| Phobius | 27 | 341 | 315 | – | – | |
| Pfam | 28 | 67 | 40 | 8.60E-13 | ||
| Gene3D | 29 | 292 | 264 | 1.40E-55 | ||
| SUPERFAMILY | 31 | 287 | 257 | 1.04E-46 | ||
| SMART | 102 | 126 | 25 | 15 | ||
| ProSiteProfiles | 104 | 126 | 23 | 7.312 | ||
| Pfam | 104 | 123 | 20 | 0.62 | ||
| Pfam | 128 | 164 | 37 | 2.70E-06 | ||
| ProSiteProfiles | 128 | 150 | 23 | 6.842 | ||
| SMART | 150 | 174 | 25 | 27 | ||
| ProSiteProfiles | 152 | 175 | 24 | 5.979 | ||
| SMART | 195 | 218 | 24 | 35 | ||
| ProSiteProfiles | 197 | 219 | 23 | 4.609 | ||
| Pfam | 220 | 233 | 14 | 0.27 | ||
| ProSiteProfiles | 220 | 241 | 22 | 6.603 | ||
| PANTHER | 240 | 610 | 371 | 0 | – | |
| PANTHER | 240 | 610 | 371 | 0 | – | |
| MobiDBLite | 313 | 337 | 25 | – | – | |
| CDD | 341 | 371 | 31 | 0.00755763 | – | |
| TMHMM | 342 | 364 | 23 | – | – | |
| Phobius | 342 | 364 | 23 | – | – | |
| Phobius | 365 | 767 | 403 | – | – | |
| MobiDBLite | 370 | 389 | 20 | – | – | |
| ProSiteProfiles | 462 | 764 | 303 | 28.669 | ||
| SUPERFAMILY | 467 | 619 | 153 | 1.78E-51 | ||
| CDD | 468 | 764 | 297 | 1.31E-84 | – | |
| Pfam | 468 | 759 | 292 | 1.30E-28 | ||
| Gene3D | 469 | 524 | 56 | 3.80E-11 | – | |
| Gene3D | 525 | 615 | 91 | 3.20E-32 | – | |
| PANTHER | 641 | 767 | 127 | 0 | – | |
| PANTHER | 641 | 767 | 127 | 0 | – | |
| SUPERFAMILY | 649 | 764 | 116 | 1.78E-51 | ||
| Gene3D | 651 | 760 | 110 | 3.20E-32 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj5g3v2113420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2113420.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.