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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1088820 |
| Transcript ID | Lj6g3v1088820.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR-like [Glycine max] gi|356556623|ref|XP_003546623.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| PANTHER | 1 | 386 | 386 | 0 | – | |
| SignalP | 1 | 23 | 23 | – | – | |
| Phobius | 1 | 23 | 23 | – | – | |
| PANTHER | 1 | 386 | 386 | 0 | – | |
| Phobius | 6 | 18 | 13 | – | – | |
| TMHMM | 7 | 24 | 18 | – | – | |
| Phobius | 19 | 23 | 5 | – | – | |
| Phobius | 24 | 640 | 617 | – | – | |
| Pfam | 29 | 71 | 43 | 2.30E-06 | ||
| Gene3D | 29 | 271 | 243 | 7.30E-61 | ||
| SUPERFAMILY | 79 | 401 | 323 | 2.20E-62 | – | |
| SMART | 99 | 123 | 25 | 70 | ||
| SMART | 195 | 219 | 25 | 37 | ||
| SMART | 267 | 291 | 25 | 46 | ||
| Gene3D | 272 | 391 | 120 | 5.30E-18 | ||
| Pfam | 294 | 315 | 22 | 0.8 | ||
| SUPERFAMILY | 333 | 616 | 284 | 1.56E-45 | ||
| SMART | 339 | 363 | 25 | 100 | ||
| Gene3D | 392 | 623 | 232 | 3.60E-52 | ||
| PANTHER | 410 | 942 | 533 | 0 | – | |
| PANTHER | 410 | 942 | 533 | 0 | – | |
| TMHMM | 640 | 662 | 23 | – | – | |
| Phobius | 641 | 662 | 22 | – | – | |
| ProSiteProfiles | 646 | 945 | 300 | 18.308 | ||
| Phobius | 663 | 958 | 296 | – | – | |
| SMART | 704 | 942 | 239 | 0.0038 | ||
| SUPERFAMILY | 705 | 945 | 241 | 4.16E-34 | ||
| Gene3D | 705 | 752 | 48 | 2.80E-07 | – | |
| Pfam | 729 | 940 | 212 | 3.10E-16 | ||
| Gene3D | 753 | 788 | 36 | 1.30E-05 | – | |
| Gene3D | 789 | 950 | 162 | 3.10E-16 | – | |
| ProSitePatterns | 806 | 818 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of Lj6g3v1088820.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1088820.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.