Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0304900 |
Transcript ID | LotjaGi1g1v0304900.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|A0A0B2R180|A0A0B2R180_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0304900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:74383608..74388730) extracted from Lotus japonicus Gifu genome v1.2.
CAACTCCTTATTCATGCTCCTGCACTCTACTTTTGATACCGTCAGATCCCCGAGATCCATGTAATGTGTGTTCAAATACC AGTTGGGTGCAACGTAAATGAATATTTATTCCAATTCATAAGAAGAATTTCATTTACATTTTATCTCAAAATGAATGCTA ACATCATGTAGTCACAAGTATCCAAACATTGAAGTAGCCATCTCAAAATGTTCGCCAATTTTCAATACTAGGTAGTTTAA TACGGTCCCTAAGTAGCCATCTCAAAATGTTGGCCTATTTTCAATAGCAAGTGGTGGAAGTTAATGCACTGGTACTAGTT CCTTAGATAAAAGGCTCTGCTTAAACTCCCTCATTATTGATTGCTGTCATTTTAGTTAAGTTAGTAAAGTTTTTTTTTTC TTTGGTTTTCTCAACCCTCTCTTTTTGGCTGTGTTTGAATCTCTAGACAAGAGAAGAAGAAACCAGATTCTAAATTCTAA TCACTGGCAAACCCGTTATCTGATGCCACCAATTCCAACGGTGTTGAGTAGCAGTAAGTAACTTTTAAGAGAAACTAAAG TCCTTATTAATTCTAAAGTTTCAGGTCATGTGATGTTGAATGCACTAACGGCTAATAGAAAAGTCATGTTAAGCTCCATT TCATGGAAAATGGAGGATATTGTGCTTTATATAACTTGCTTTCTTCTTTTTGTGCAGTGATGCTTCACTCTTTGATGTGT TCTTGGATTTCCAGAACTGAATTTCATACCAAGGTAATCTCTCATTCCCTTCAAATTCCAGTTTGAATATTTGCAGTCCC TAACTTAGAAGTTGGAACACTTAGTGTATGTTTGGAGATCCTTCTACAATTGATTCTAAAGTTAGAATCGATTCTTGAGA GAAGTTTTCGTGAGTAGCTCTGAGGAAAAATAAGTAGATTCGAACATTCTATTCCTCAGAATCGATTATGGTACTCAGAA ACTACTCACAAAAGCTTCTCTCTTAAAATTGATTTTGGCTTCAGAATTGATTATGAAGTAAGTAAAGTTGATTAAAACAT GCTATTAAATATTAATATGACATGAACCATGGCTCATGATTGGTAAATAAGGCATTTGTTGAAGCTTGTTCATTTCTGGT TAAAACTGGAGAATTATTCTGATATGCTATATCTTCAATTCCTTCTCAGGCTTTGTTATTTTTAATGGTTTTTTTTTTGT TAAATGCTGTTTGTGTGCTTACTTTGAGTTGTTTAGTGCAATACTTGTCCCATCTGCATCCCTTTAATTATCTTTTGCTT TTGTACCTGTTTAAATCTGGTTCATCAAATGGTTTTCAGCTGTAATCACTGACCAGATATGGTGGCAGAAATGAGAAATC AACACCAATAATTTATATTGGTCTTTTAAAATTGAACAGAATACATGCTACTTTTTTTAAAGAATGCTTTTTCTTTATAA AGAACAAAGGAGAATCAAACTTTAGCCTTTTCTTTTTCTAGCTCTATTTTTTTCTTGGATTCTCAATTATCTGAATGCCT TTTCCCCTTCAGCCTTCTTTGTTGTTTCTGAAATATATAAGAACCTATTTGTGAGGCGATTTCTTTATTCCCAGTGAAAA GTGCACTTTAGTCCCCCATATTTTAAAGTTCTAAGGCAACTCAAGCCTTTGGCTTTTTACTTTTTCTTTTTTAAATGGAT GAGTGAGTATAACACATCATGAAGTATTGAAAGAATGAAAATGCCTCCACTGATGCATCTGATAGAAGGAAGTCCCTTTC CTCACTTCAAAACCTGCTTAATGGTAAGATGAACAAGACTATCTTAACTTTTCTTTTAATAAATTTTGTTTCTTAGTAAA GCTGCAATAAGTGATATCCTCTGCATCATCAGCAACATTTCATCTTAAAGTTCAAATTTGTATAGAGTTGTTACTTGTTT GAATTCAATTTTGTACAACTGATTCTGAAGTCAGAATTGGTTATGGGGAGAAGTTTTTTCTAGTAGCCTCTAGGTTTCAG AATTGATTCTGATGAAACAGAAGTTAATCCAAGCATGCTAATAGTGTATCGTTCTTACCCCTTTCATCCTATGAAAACCA TCACTTTCTGATTGAATTCTGCTTCACTTAGTAATTTAAACATACTACTGCTTTTGACTAGGTTCAGGTAATCATGCTTG CTTGCCCCAAATGATTCCTTATGTTTGAATAAAAATTAGTTAATGTTATCTTTGTATATGATCTATTTTCCTAGATCAAC TAACAACTTGCTCTATTTTCGAAAACCAAACCAGTAAAGGATGCAGAAAAGTTAAGCTCACAACTTGGAATCACCACTTG CCTTGGATTCTGCACCAAACAAGAGATGAAGTTTGAGTTCTCTATTGCTGCTCTTGTTCTATTAACCTCCACACTGTCTC TCTTTAGCTTGATTGAAGCATCTGACTTGAACTCAGATAAACAAGCTCTCTTGGAGTTCGCTTCTTCAGTCCCACATGCT CCAAGGCTCAACTGGAATAATGACTCAGCTTCAATTTGCACCTCATGGGTTGGTGTGACTTGTAACTCAAACGGAACTCG TGTCACCGGAATCCATCTTCCGGGAATCGGATTAACTGGGTCCATTCCGGAGAACACCATTGGAAAACTAGATGCTCTTA AGGTCCTTAGCCTTCATTCCAATGGCCTTAAAGGAACATTTCCTTCTAACATTCTCTCTATTCCTTCACTCCAATTTGCA CACTTGCAGCACAACAATTTCTCAGGTCCAATTCCTTCCATTGTCTCCCCTAAACTCATTACATTGGACATTTCCTTTAA CTCTTTTTCTGGTAGCATTCCACCTGCATTTCAGAACCTGAGAAGACTCACCTGGTTGTATCTCCAACACAATTTCATAT CTGGAGCTATCCCTGACTTTGACCTTCCTAGTCTCAAACACTTGAATTTGAGTTATAATAACTTGAATGGCTCAATTCCA AACTCCATCAAGACATTCCCAAATACTTCTTTTCTTGGGAACTCTCTCTTATGTGGGCCACCTCTCAATAGTTGCTCTTC AATCTCTCCCTCTCCATCTCCTTCTCCTCCTGCAACCACCCAAAACCAAAAAGCAACCACACATAAGAAAAGCTTTGGCC TAGCTATTATACTTGCTCTGGTCATTGGAGGCATTGCCTTCCTTTCTCTACTATTTTTGGTGATCTCTGTGTGCTGTCTG AAGAGGAAGAACAGTAAAACCAGTGGTATACTGAAAGGAAAGGCTTCTTGTGCTGGAAAGCCTGAGATGTCTAAGAGTTT TGGAAGCGGCGTGCAAGCTGCTGAGAAGAACAAGTTATTTTTCTTTGAAGGCTCCTCTCATAGCTTTGACCTTGAGGATT TGCTAAAGGCCTCAGCTGAAGTTCTTGGGAAAGGGAGCTACGGAACAGCTTACAAGGCTGTTCTGGAGGAAGGAACAACA GTGGTGGTTAAAAGGTTGAAGGAAGTTGTGGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAAATTGTGGGGAGAATTGG ACAACACCCTAATGTCATGCCTCTTAGAGCTTATTACTATTCCAAAGATGAGAAACTCCTAGTCTACAACTACATGCAAG GAGGCAGCTTGTTTTTCTTGTTGCATGGTATGTTCTAATCTAAGCTTACCTACTATTCTAATAGCATGTTTTAAAATTCT ACTACAATTGAGAGTGTGTGTTTGGTTCCCTATGAGAGAATTTAGAATCAATTCTGGTAGAGTAAAATCAATTTTCGATG ACAACATAGATGTTTGGGTGGCTGGAGAATTGATTTCAGTTCCAAAATTAATTATTCTAGAAGTTAGAAAGAGTAGCTTC AGCGTGAACATAATCATTTCTGATATTTTACAAGTGAATTTGACAACATTACCTATAAAAATGACTTATCATAAATGTTT CCAAACATAAATCACCTAACTTTTGAACTCACTTTTACTATTATCAGTTTTACCAAAATAAATTTTATCCAGGGTTAATT GTGAAAACGTTTATATAAATGTCATTATGAAAAAAACTTCTGTGAGTGGGCAGTAGCTTCTAGTTGCCAGAATTAGTTTT GAGTAGCATAAGTTGATCCAAACATGCTTAAAGTTGATACATCTATTCATTCACCAATGTCAATTGTACTAATGCTTTAT CTTTGCCTAACTCTTCTATTCCAAACTATAGGAAACAGGGGTGCAGGAAGAACTCCACTAGATTGGGATTCAAGAGTGAA GATTGCAGTGGGAGCTGCCAAGGGAATTGCTTTCATTCACTCTGAAGGGGGACCAAAATTCGCACATGGCAACATCAAGT CCACCAATGTGCTCATAACAGAAGAACTTGAGAGCTCCATATCTGATGCTGGATTGGCTCCTGTCATGAATGCCCCATCA ACTATGTCTAGATCCAATGGCTATAGAGCCACAGAAGTCACTGATTCAAGGAAGATCACACAAAAATCTGATGTTTACAG CTTTGGTGTGCTGCTTCTTGAAATGCTGACAGGGAAAACCCCACTGAGATATCCTGGCTATGAAGATGTGGTTGATCTTC CAAGGTGGGTGAGGTCTGTTGTGAGGGAGGAATGGACAGCTGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAGTATGTT GAAGAGGAAATGGTGCAGATGCTTCAGATTGCACTTGCTTGTGTAGCTAAGACACCAGATATGAAGCCTAGAATGGAGGA TGTTGTTAGAATGGTTGAGCAAATTAAGCACCCTGAGTTGAAGAACAGGGCATCCTCTGAATCTGGTTCTAATGATCAGA CACCATGAATCTTTTCCTCAAGCAATAAGCAAGTTTCATTGTAAAATACTAATCTTTGTGTTCATGTTGGTCAGAAAAGG TTTCATGTTTTACCTTATTTATAATCTTTTTGAAACTTTTGGCTAATTGTTGTTCAGTCAATGGAAATAATTCAGGTTTC ATCATGCAGATCAAAGATGTCCATTAATCAGCATTATTTCTCACCTTCAATCATTTAGATTGATTTTTGTTCAGCATTGG TTGATCATTTTACTTTAGAATTGTATTTTCGTATGTCTAATTATCTATGCATCTCATCTTCGTACCCAAGTATATAAATT GAC
CDS sequence (LotjaGi1g1v0304900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTTGAGTTCTCTATTGCTGCTCTTGTTCTATTAACCTCCACACTGTCTCTCTTTAGCTTGATTGAAGCATCTGA CTTGAACTCAGATAAACAAGCTCTCTTGGAGTTCGCTTCTTCAGTCCCACATGCTCCAAGGCTCAACTGGAATAATGACT CAGCTTCAATTTGCACCTCATGGGTTGGTGTGACTTGTAACTCAAACGGAACTCGTGTCACCGGAATCCATCTTCCGGGA ATCGGATTAACTGGGTCCATTCCGGAGAACACCATTGGAAAACTAGATGCTCTTAAGGTCCTTAGCCTTCATTCCAATGG CCTTAAAGGAACATTTCCTTCTAACATTCTCTCTATTCCTTCACTCCAATTTGCACACTTGCAGCACAACAATTTCTCAG GTCCAATTCCTTCCATTGTCTCCCCTAAACTCATTACATTGGACATTTCCTTTAACTCTTTTTCTGGTAGCATTCCACCT GCATTTCAGAACCTGAGAAGACTCACCTGGTTGTATCTCCAACACAATTTCATATCTGGAGCTATCCCTGACTTTGACCT TCCTAGTCTCAAACACTTGAATTTGAGTTATAATAACTTGAATGGCTCAATTCCAAACTCCATCAAGACATTCCCAAATA CTTCTTTTCTTGGGAACTCTCTCTTATGTGGGCCACCTCTCAATAGTTGCTCTTCAATCTCTCCCTCTCCATCTCCTTCT CCTCCTGCAACCACCCAAAACCAAAAAGCAACCACACATAAGAAAAGCTTTGGCCTAGCTATTATACTTGCTCTGGTCAT TGGAGGCATTGCCTTCCTTTCTCTACTATTTTTGGTGATCTCTGTGTGCTGTCTGAAGAGGAAGAACAGTAAAACCAGTG GTATACTGAAAGGAAAGGCTTCTTGTGCTGGAAAGCCTGAGATGTCTAAGAGTTTTGGAAGCGGCGTGCAAGCTGCTGAG AAGAACAAGTTATTTTTCTTTGAAGGCTCCTCTCATAGCTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCT TGGGAAAGGGAGCTACGGAACAGCTTACAAGGCTGTTCTGGAGGAAGGAACAACAGTGGTGGTTAAAAGGTTGAAGGAAG TTGTGGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAAATTGTGGGGAGAATTGGACAACACCCTAATGTCATGCCTCTT AGAGCTTATTACTATTCCAAAGATGAGAAACTCCTAGTCTACAACTACATGCAAGGAGGCAGCTTGTTTTTCTTGTTGCA TGGAAACAGGGGTGCAGGAAGAACTCCACTAGATTGGGATTCAAGAGTGAAGATTGCAGTGGGAGCTGCCAAGGGAATTG CTTTCATTCACTCTGAAGGGGGACCAAAATTCGCACATGGCAACATCAAGTCCACCAATGTGCTCATAACAGAAGAACTT GAGAGCTCCATATCTGATGCTGGATTGGCTCCTGTCATGAATGCCCCATCAACTATGTCTAGATCCAATGGCTATAGAGC CACAGAAGTCACTGATTCAAGGAAGATCACACAAAAATCTGATGTTTACAGCTTTGGTGTGCTGCTTCTTGAAATGCTGA CAGGGAAAACCCCACTGAGATATCCTGGCTATGAAGATGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTGAGGGAG GAATGGACAGCTGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAGTATGTTGAAGAGGAAATGGTGCAGATGCTTCAGAT TGCACTTGCTTGTGTAGCTAAGACACCAGATATGAAGCCTAGAATGGAGGATGTTGTTAGAATGGTTGAGCAAATTAAGC ACCCTGAGTTGAAGAACAGGGCATCCTCTGAATCTGGTTCTAATGATCAGACACCATGA
Protein sequence (LotjaGi1g1v0304900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFEFSIAALVLLTSTLSLFSLIEASDLNSDKQALLEFASSVPHAPRLNWNNDSASICTSWVGVTCNSNGTRVTGIHLPG IGLTGSIPENTIGKLDALKVLSLHSNGLKGTFPSNILSIPSLQFAHLQHNNFSGPIPSIVSPKLITLDISFNSFSGSIPP AFQNLRRLTWLYLQHNFISGAIPDFDLPSLKHLNLSYNNLNGSIPNSIKTFPNTSFLGNSLLCGPPLNSCSSISPSPSPS PPATTQNQKATTHKKSFGLAIILALVIGGIAFLSLLFLVISVCCLKRKNSKTSGILKGKASCAGKPEMSKSFGSGVQAAE KNKLFFFEGSSHSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQMEIVGRIGQHPNVMPL RAYYYSKDEKLLVYNYMQGGSLFFLLHGNRGAGRTPLDWDSRVKIAVGAAKGIAFIHSEGGPKFAHGNIKSTNVLITEEL ESSISDAGLAPVMNAPSTMSRSNGYRATEVTDSRKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEDVVDLPRWVRSVVRE EWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKTPDMKPRMEDVVRMVEQIKHPELKNRASSESGSNDQTP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 25 | 25 | - | – | |
Phobius | 1 | 6 | 6 | - | – | |
SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
SignalP_EUK | 1 | 25 | 25 | - | – | |
SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
TMHMM | 5 | 23 | 19 | - | – | |
Phobius | 7 | 20 | 14 | - | – | |
PANTHER | 9 | 619 | 611 | 0.0 | – | |
PANTHER | 9 | 619 | 611 | 0.0 | – | |
Phobius | 21 | 25 | 5 | - | – | |
Gene3D | 23 | 185 | 163 | 2.2E-40 | ||
Phobius | 26 | 256 | 231 | - | – | |
Pfam | 29 | 67 | 39 | 1.4E-9 | ||
SUPERFAMILY | 29 | 227 | 199 | 2.15E-32 | – | |
ProSiteProfiles | 97 | 118 | 22 | 5.086 | ||
Pfam | 143 | 165 | 23 | 0.04 | ||
ProSiteProfiles | 143 | 166 | 24 | 5.048 | ||
Pfam | 167 | 206 | 40 | 4.7E-7 | ||
ProSiteProfiles | 167 | 188 | 22 | 5.948 | ||
Gene3D | 186 | 231 | 46 | 8.5E-9 | ||
ProSiteProfiles | 189 | 211 | 23 | 7.196 | ||
Phobius | 257 | 285 | 29 | - | – | |
TMHMM | 257 | 279 | 23 | - | – | |
Phobius | 286 | 632 | 347 | - | – | |
Gene3D | 308 | 416 | 109 | 1.3E-20 | – | |
ProSiteProfiles | 341 | 617 | 277 | 31.623 | ||
Pfam | 345 | 543 | 199 | 6.9E-34 | ||
SUPERFAMILY | 345 | 612 | 268 | 2.87E-57 | ||
CDD | 347 | 612 | 266 | 2.09013E-87 | – | |
ProSitePatterns | 347 | 378 | 32 | - | ||
Gene3D | 417 | 630 | 214 | 5.5E-47 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0304900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…