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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0304900 |
| Transcript ID | LotjaGi1g1v0304900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G58300.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LVM0|Y5830_ARATH Probable inactive receptor kinase At5g58300; TrEMBL-Plants: tr|A0A0B2R180|A0A0B2R180_GLYSO Putative inactive receptor kinase; Found in the gene: LotjaGi1g1v0304900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:74385953..74388415) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGTTTGAGTTCTCTATTGCTGCTCTTGTTCTATTAACCTCCACACTGTCTCTCTTTAGCTTGATTGAAGCATCTGA CTTGAACTCAGATAAACAAGCTCTCTTGGAGTTCGCTTCTTCAGTCCCACATGCTCCAAGGCTCAACTGGAATAATGACT CAGCTTCAATTTGCACCTCATGGGTTGGTGTGACTTGTAACTCAAACGGAACTCGTGTCACCGGAATCCATCTTCCGGGA ATCGGATTAACTGGGTCCATTCCGGAGAACACCATTGGAAAACTAGATGCTCTTAAGGTCCTTAGCCTTCATTCCAATGG CCTTAAAGGAACATTTCCTTCTAACATTCTCTCTATTCCTTCACTCCAATTTGCACACTTGCAGCACAACAATTTCTCAG GTCCAATTCCTTCCATTGTCTCCCCTAAACTCATTACATTGGACATTTCCTTTAACTCTTTTTCTGGTAGCATTCCACCT GCATTTCAGAACCTGAGAAGACTCACCTGGTTGTATCTCCAACACAATTTCATATCTGGAGCTATCCCTGACTTTGACCT TCCTAGTCTCAAACACTTGAATTTGAGTTATAATAACTTGAATGGCTCAATTCCAAACTCCATCAAGACATTCCCAAATA CTTCTTTTCTTGGGAACTCTCTCTTATGTGGGCCACCTCTCAATAGTTGCTCTTCAATCTCTCCCTCTCCATCTCCTTCT CCTCCTGCAACCACCCAAAACCAAAAAGCAACCACACATAAGAAAAGCTTTGGCCTAGCTATTATACTTGCTCTGGTCAT TGGAGGCATTGCCTTCCTTTCTCTACTATTTTTGGTGATCTCTGTGTGCTGTCTGAAGAGGAAGAACAGTAAAACCAGTG GTATACTGAAAGGAAAGGCTTCTTGTGCTGGAAAGCCTGAGATGTCTAAGAGTTTTGGAAGCGGCGTGCAAGCTGCTGAG AAGAACAAGTTATTTTTCTTTGAAGGCTCCTCTCATAGCTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCT TGGGAAAGGGAGCTACGGAACAGCTTACAAGGCTGTTCTGGAGGAAGGAACAACAGTGGTGGTTAAAAGGTTGAAGGAAG TTGTGGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAAATTGTGGGGAGAATTGGACAACACCCTAATGTCATGCCTCTT AGAGCTTATTACTATTCCAAAGATGAGAAACTCCTAGTCTACAACTACATGCAAGGAGGCAGCTTGTTTTTCTTGTTGCA TGGTATGTTCTAATCTAAGCTTACCTACTATTCTAATAGCATGTTTTAAAATTCTACTACAATTGAGAGTGTGTGTTTGG TTCCCTATGAGAGAATTTAGAATCAATTCTGGTAGAGTAAAATCAATTTTCGATGACAACATAGATGTTTGGGTGGCTGG AGAATTGATTTCAGTTCCAAAATTAATTATTCTAGAAGTTAGAAAGAGTAGCTTCAGCGTGAACATAATCATTTCTGATA TTTTACAAGTGAATTTGACAACATTACCTATAAAAATGACTTATCATAAATGTTTCCAAACATAAATCACCTAACTTTTG AACTCACTTTTACTATTATCAGTTTTACCAAAATAAATTTTATCCAGGGTTAATTGTGAAAACGTTTATATAAATGTCAT TATGAAAAAAACTTCTGTGAGTGGGCAGTAGCTTCTAGTTGCCAGAATTAGTTTTGAGTAGCATAAGTTGATCCAAACAT GCTTAAAGTTGATACATCTATTCATTCACCAATGTCAATTGTACTAATGCTTTATCTTTGCCTAACTCTTCTATTCCAAA CTATAGGAAACAGGGGTGCAGGAAGAACTCCACTAGATTGGGATTCAAGAGTGAAGATTGCAGTGGGAGCTGCCAAGGGA ATTGCTTTCATTCACTCTGAAGGGGGACCAAAATTCGCACATGGCAACATCAAGTCCACCAATGTGCTCATAACAGAAGA ACTTGAGAGCTCCATATCTGATGCTGGATTGGCTCCTGTCATGAATGCCCCATCAACTATGTCTAGATCCAATGGCTATA GAGCCACAGAAGTCACTGATTCAAGGAAGATCACACAAAAATCTGATGTTTACAGCTTTGGTGTGCTGCTTCTTGAAATG CTGACAGGGAAAACCCCACTGAGATATCCTGGCTATGAAGATGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTGAG GGAGGAATGGACAGCTGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAGTATGTTGAAGAGGAAATGGTGCAGATGCTTC AGATTGCACTTGCTTGTGTAGCTAAGACACCAGATATGAAGCCTAGAATGGAGGATGTTGTTAGAATGGTTGAGCAAATT AAGCACCCTGAGTTGAAGAACAGGGCATCCTCTGAATCTGGTTCTAATGATCAGACACCATGA
CDS sequence (LotjaGi1g1v0304900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTTGAGTTCTCTATTGCTGCTCTTGTTCTATTAACCTCCACACTGTCTCTCTTTAGCTTGATTGAAGCATCTGA CTTGAACTCAGATAAACAAGCTCTCTTGGAGTTCGCTTCTTCAGTCCCACATGCTCCAAGGCTCAACTGGAATAATGACT CAGCTTCAATTTGCACCTCATGGGTTGGTGTGACTTGTAACTCAAACGGAACTCGTGTCACCGGAATCCATCTTCCGGGA ATCGGATTAACTGGGTCCATTCCGGAGAACACCATTGGAAAACTAGATGCTCTTAAGGTCCTTAGCCTTCATTCCAATGG CCTTAAAGGAACATTTCCTTCTAACATTCTCTCTATTCCTTCACTCCAATTTGCACACTTGCAGCACAACAATTTCTCAG GTCCAATTCCTTCCATTGTCTCCCCTAAACTCATTACATTGGACATTTCCTTTAACTCTTTTTCTGGTAGCATTCCACCT GCATTTCAGAACCTGAGAAGACTCACCTGGTTGTATCTCCAACACAATTTCATATCTGGAGCTATCCCTGACTTTGACCT TCCTAGTCTCAAACACTTGAATTTGAGTTATAATAACTTGAATGGCTCAATTCCAAACTCCATCAAGACATTCCCAAATA CTTCTTTTCTTGGGAACTCTCTCTTATGTGGGCCACCTCTCAATAGTTGCTCTTCAATCTCTCCCTCTCCATCTCCTTCT CCTCCTGCAACCACCCAAAACCAAAAAGCAACCACACATAAGAAAAGCTTTGGCCTAGCTATTATACTTGCTCTGGTCAT TGGAGGCATTGCCTTCCTTTCTCTACTATTTTTGGTGATCTCTGTGTGCTGTCTGAAGAGGAAGAACAGTAAAACCAGTG GTATACTGAAAGGAAAGGCTTCTTGTGCTGGAAAGCCTGAGATGTCTAAGAGTTTTGGAAGCGGCGTGCAAGCTGCTGAG AAGAACAAGTTATTTTTCTTTGAAGGCTCCTCTCATAGCTTTGACCTTGAGGATTTGCTAAAGGCCTCAGCTGAAGTTCT TGGGAAAGGGAGCTACGGAACAGCTTACAAGGCTGTTCTGGAGGAAGGAACAACAGTGGTGGTTAAAAGGTTGAAGGAAG TTGTGGTTGGAAAGAAGGAGTTTGAGCAACAGATGGAAATTGTGGGGAGAATTGGACAACACCCTAATGTCATGCCTCTT AGAGCTTATTACTATTCCAAAGATGAGAAACTCCTAGTCTACAACTACATGCAAGGAGGCAGCTTGTTTTTCTTGTTGCA TGGAAACAGGGGTGCAGGAAGAACTCCACTAGATTGGGATTCAAGAGTGAAGATTGCAGTGGGAGCTGCCAAGGGAATTG CTTTCATTCACTCTGAAGGGGGACCAAAATTCGCACATGGCAACATCAAGTCCACCAATGTGCTCATAACAGAAGAACTT GAGAGCTCCATATCTGATGCTGGATTGGCTCCTGTCATGAATGCCCCATCAACTATGTCTAGATCCAATGGCTATAGAGC CACAGAAGTCACTGATTCAAGGAAGATCACACAAAAATCTGATGTTTACAGCTTTGGTGTGCTGCTTCTTGAAATGCTGA CAGGGAAAACCCCACTGAGATATCCTGGCTATGAAGATGTGGTTGATCTTCCAAGGTGGGTGAGGTCTGTTGTGAGGGAG GAATGGACAGCTGAAGTGTTTGATGAGGAGCTTCTGAGAGGGCAGTATGTTGAAGAGGAAATGGTGCAGATGCTTCAGAT TGCACTTGCTTGTGTAGCTAAGACACCAGATATGAAGCCTAGAATGGAGGATGTTGTTAGAATGGTTGAGCAAATTAAGC ACCCTGAGTTGAAGAACAGGGCATCCTCTGAATCTGGTTCTAATGATCAGACACCATGA
Protein sequence (LotjaGi1g1v0304900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFEFSIAALVLLTSTLSLFSLIEASDLNSDKQALLEFASSVPHAPRLNWNNDSASICTSWVGVTCNSNGTRVTGIHLPG IGLTGSIPENTIGKLDALKVLSLHSNGLKGTFPSNILSIPSLQFAHLQHNNFSGPIPSIVSPKLITLDISFNSFSGSIPP AFQNLRRLTWLYLQHNFISGAIPDFDLPSLKHLNLSYNNLNGSIPNSIKTFPNTSFLGNSLLCGPPLNSCSSISPSPSPS PPATTQNQKATTHKKSFGLAIILALVIGGIAFLSLLFLVISVCCLKRKNSKTSGILKGKASCAGKPEMSKSFGSGVQAAE KNKLFFFEGSSHSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQMEIVGRIGQHPNVMPL RAYYYSKDEKLLVYNYMQGGSLFFLLHGNRGAGRTPLDWDSRVKIAVGAAKGIAFIHSEGGPKFAHGNIKSTNVLITEEL ESSISDAGLAPVMNAPSTMSRSNGYRATEVTDSRKITQKSDVYSFGVLLLEMLTGKTPLRYPGYEDVVDLPRWVRSVVRE EWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKTPDMKPRMEDVVRMVEQIKHPELKNRASSESGSNDQTP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| TMHMM | 5 | 23 | 19 | - | – | |
| Phobius | 7 | 20 | 14 | - | – | |
| PANTHER | 9 | 619 | 611 | 0.0 | – | |
| PANTHER | 9 | 619 | 611 | 0.0 | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| Gene3D | 23 | 185 | 163 | 2.2E-40 | ||
| Phobius | 26 | 256 | 231 | - | – | |
| Pfam | 29 | 67 | 39 | 1.4E-9 | ||
| SUPERFAMILY | 29 | 227 | 199 | 2.15E-32 | – | |
| ProSiteProfiles | 97 | 118 | 22 | 5.086 | ||
| Pfam | 143 | 165 | 23 | 0.04 | ||
| ProSiteProfiles | 143 | 166 | 24 | 5.048 | ||
| Pfam | 167 | 206 | 40 | 4.7E-7 | ||
| ProSiteProfiles | 167 | 188 | 22 | 5.948 | ||
| Gene3D | 186 | 231 | 46 | 8.5E-9 | ||
| ProSiteProfiles | 189 | 211 | 23 | 7.196 | ||
| Phobius | 257 | 285 | 29 | - | – | |
| TMHMM | 257 | 279 | 23 | - | – | |
| Phobius | 286 | 632 | 347 | - | – | |
| Gene3D | 308 | 416 | 109 | 1.3E-20 | – | |
| ProSiteProfiles | 341 | 617 | 277 | 31.623 | ||
| Pfam | 345 | 543 | 199 | 6.9E-34 | ||
| SUPERFAMILY | 345 | 612 | 268 | 2.87E-57 | ||
| CDD | 347 | 612 | 266 | 2.09013E-87 | – | |
| ProSitePatterns | 347 | 378 | 32 | - | ||
| Gene3D | 417 | 630 | 214 | 5.5E-47 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0304900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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