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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0439300 |
| Transcript ID | LotjaGi1g1v0439300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-kinase, putative; TAIR: AT3G47570.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570; TrEMBL-Plants: tr|K7L1S6|K7L1S6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0439300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:93537396..93541093) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGGAAAAAAAGAGCCCTTAAATTTGTGATATTATTCCATCAAAATGTACAAAATCACAAACCTTAGATATAATTTCA GACTTGGCCTCAAAATCTTGAACTTTAAACATGAACCATTTTTGTGCAAATTCCAAGAGCTTATTGTTGCAAACTCTTAA TGGTTTTCTTCTGTTATGCATGATCTCAAGCTTGCACTTGGTAACAACAGCAACATCAGAAGAAAATGAAACTGATCTCA GTGCTTTACTTGACTTCAAGAGTAAAATAGTTGGAGATCCATTCAACATTATGAGTTCTTGGAATAACTCCTTCCACCAC TGCAATTGGACAGGAATCACCTGCAACATTTCCAATGGAAGGGTCATGAACATGAACCTTGCAAAACTGAGATTAAAAGG TACTCTTTCACCATCCATAGGAAACCTCACATTTCTCACCACACTGAACCTGTTGAACAATAGCTTCCATGGTGAAATTC CTCAAGAGTTGGGGCGTTTACACTACGTGCAAACTCTGGAATTCGCCTTCAATGACTTTGGTGGAAACATTCCAAATAAT CTCAGCCACTGTACACAACTGTTATCACTTGGTTTTGGTGCTAACAATCTCACAGGAACAATCCCAAATTGGATAGGAAA CATTTCTTCTCTGACTCGTCTTAGTTTTGCCTTGAACAATTTTCATGGAAGCATACCACATGAGGTTGGTCTTTTATCAA GTTTAACACAACTTCTACTATATGGGAATTTTTTGTCTGGCACAGTTCCTTCTTCAATCTATAATCTTTCTTCCTTGTTT TATTTCACTCTCACTCAAAACAATCTCCATGGAAGTTTACCATCTGATGTGGGATTTACTCTTCCTAACCTTGAAGTGTT TGCTGGTGGAGTCAACAATTTCACAGGGAATGTTCCTGCATCATTGTTAAATGCTTCAAAACTAGTAGTTCTTGACTTTT CTGTTAATGCCCTCACTGGATCACTGCCTAAGAACATAGGGGCCTTGAACCGGTTAACTAGACTTAGTTTTGAGCATAAT AGGCTTGGAACTGGTAAAGCAGGAGATCTTAATTTTCTTGATTCTTTGGTCAATTGCACATCTCTACAGGTTCTACGCCT CGGAACGAATCGCTTTGGTGGAGTGTTGCCTGATTCAATTGCTAATTTCTCAACCCAATTGTACACATTTGCCTTTGGTT CCAATGAAATACGAGGAAATATACCTGCTGGGATTAGCAATCTTGTTAACTTGACCCTTTTATCATTGGAAGGAAACCAC TTAATTGGTAGTGTTCCTGATGCAATAGGCAAGCTGCAAAATCTGCAAGAGTTGTATCTCAATGTCAACAACTTTTCAGG AAGAATCCCATCCTCTTTAGGAAATTTGTCTTCAATAAATAAACTCTTTCTGGAGGAGAACAACTTTGAAGGAAGCATAC CTTCAAGTCTTGGAAAGTGCAAGGAGTTATTGGTGTTTAGCCTTTATCGTAACAAGCTTAGAGGCACAATACCAAAAGAA GTTTTTAGCCTTTCTTCACTATCAATATATTTGGATGTGTCTTACAATGCTTTGTCAGGGACACTGCCTGTTGAAGTGGG TAAGCTGCAAAACCTTGGAGAGTTGGTGCTGTCTGGTAACAACTTCTCAGGAGTCATTCCATCTTCTCTTGGCAGCTGCA TTAGCTTGGAAAAGCTGCGTTTGCAGGGTAACTCTTTCCAGGGAAACATTCCTCAAAGTTTGAAGGATTTGAGAGGTTTA CTTGATATAGATCTTTCGCGCAATAACCTGTCTGGTAAGATTCCTGAGTTTCTTGGTGAGTTCACACAACTCAAGCGCCT TAATCTTGCTAACAACAGTTTTGAAGGTGAAATACCAATGAATGGAATCTTCAAGAATGTAACTTCCATTTCATTATATG GAAACAGCAAGCTCTGTGGTGGTGTCCCACAATTGAATTTTCCTTCATGCACTGTGAGGAAAACCTCTTCCTTAAGAAAA CTTCTTTCCCCTAAGGTGGCTATCCCTATAGGTATTGCACTTGTTCTTGTCCTCTTGATGTCATGTTTTCTTACAATCTT CCTCATTGTGAAAAGAGAAAAAAAGAGAACTTCATTATCAACTACCTCCTTGGAATTGGGATTTTCTTACTCAGAAATTG CAAATTGCACTGGTGGGTTCTCCCAGGATAACTTGGTTGGCTCAGGAAGTTTTGGTTCTGTATATAAAGGAACTCTTTCA GGTGATGGACCAATTGTTGCAGTGAAAGTGTTGAATCTTCAACAAAGAGGGGCTTCGAGAAGCTTCATTGATGAATGCCA TGTTCTGAGGAATACAAGGCACCGCAACCTTCTCAAGATCATAACTGCCATCTCAAGTGTTGATCAACAAGGTAATGAGT TCAAGGCTCTAGTCTTTGAGTTCATGTCTAATGGAAGTCTAGAAGATTGGTTGCATCCAATTAGTAACCTTCAATCTCAA ACCAAGACATTGAAATTTATCCAGAGACTGAACATTGCAATTGATGTTGCTTGTGCCCTGGAATATCTCCACCACTCGGG TGAAACACGAATTGTTCATTGTGATATAAAGCCAAGCAATGTTCTTCTTGACAATGATTTGGTAGCCCATGTTGGTGACT TTGGTTTAGCTACATTTCTGTTTGAAGAACCAAGCAATTTTTCCAAACAATCAATCATGTCAGCTAGCCTAAGGGGTTCT ATTGGATATGTCCCTCCAGGTATGTTTCTTAATCAAGTAATGCTAAGTTGTAGATTATATATTCGTATATAGCAAAAATT GGAATTGACATGTTAAGTCTCACATTGACCGGATATATGCCTAATGAAAACCTATATAAATAGAGGGACAATCTTTACAT CTAAGCTAGCTTACAGGATAGAGTTGCACCTAACCCAAATTAAATGGGAAGCTATCCTCACCTTAGAGTTAGCTTTTGAG ATAGAGTTAAGTTTAACACTATAATTGACCACTTATAAATGATTGCAGAGTATGGCATGGGTGGAAAGCCTTCTACGCTT GGAGATATCTACAGTTACGGAATACTATTACTTGAGATCTTCACAAGAAAAAGACCAACTGATGAAGCATTTGAAGGTGG CATGGGAATTCGCCAGTTTATAGCAATGGCTCTACCTAACAATGTCATGGATGTAATTGATCCTTCATTTATCTGTGAAG ATGAATTTGATGATGAAAGTGAAGAATTTGAAGAAAATGAAGAAGAAGAAAGAGCTATTAGGGGAAACTATGAGATTGAA GTCCATGGTAAAGGTTTGTTGGAGGCTTGCATTGTATCAGTGATGGAAATTGGAGTGTCTTGCTCAGCAACTGCTCCAAG TGAACGGATGCCAATCACTGCAGTGGTTAAAAAACTGCATGCTATCAAGAACTCACTTATAAAGAAGAAGGATAAAGTAT AATGCTAGCTATATGAACAATATTAAGAAGACAAATAAGATAATAAATGTGTACCACATGATTTTGTGCATAACTAGATT TAGACCTGTCAAAATAAACAGGTGCCTCAGTTCATGATAATCTCAAAAATTATAGACCATGTAATAACCATTTATTTCAA ATTTCAATTGTTTTGCAAGTGCTTAATATTTCTTGCAAGAAATTTAGTAGTCGTTTGACAGGGAAATTTCATGAGTCAGA GTCAGTATTTTTTGGCAG
CDS sequence (LotjaGi1g1v0439300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCATTTTTGTGCAAATTCCAAGAGCTTATTGTTGCAAACTCTTAATGGTTTTCTTCTGTTATGCATGATCTCAAG CTTGCACTTGGTAACAACAGCAACATCAGAAGAAAATGAAACTGATCTCAGTGCTTTACTTGACTTCAAGAGTAAAATAG TTGGAGATCCATTCAACATTATGAGTTCTTGGAATAACTCCTTCCACCACTGCAATTGGACAGGAATCACCTGCAACATT TCCAATGGAAGGGTCATGAACATGAACCTTGCAAAACTGAGATTAAAAGGTACTCTTTCACCATCCATAGGAAACCTCAC ATTTCTCACCACACTGAACCTGTTGAACAATAGCTTCCATGGTGAAATTCCTCAAGAGTTGGGGCGTTTACACTACGTGC AAACTCTGGAATTCGCCTTCAATGACTTTGGTGGAAACATTCCAAATAATCTCAGCCACTGTACACAACTGTTATCACTT GGTTTTGGTGCTAACAATCTCACAGGAACAATCCCAAATTGGATAGGAAACATTTCTTCTCTGACTCGTCTTAGTTTTGC CTTGAACAATTTTCATGGAAGCATACCACATGAGGTTGGTCTTTTATCAAGTTTAACACAACTTCTACTATATGGGAATT TTTTGTCTGGCACAGTTCCTTCTTCAATCTATAATCTTTCTTCCTTGTTTTATTTCACTCTCACTCAAAACAATCTCCAT GGAAGTTTACCATCTGATGTGGGATTTACTCTTCCTAACCTTGAAGTGTTTGCTGGTGGAGTCAACAATTTCACAGGGAA TGTTCCTGCATCATTGTTAAATGCTTCAAAACTAGTAGTTCTTGACTTTTCTGTTAATGCCCTCACTGGATCACTGCCTA AGAACATAGGGGCCTTGAACCGGTTAACTAGACTTAGTTTTGAGCATAATAGGCTTGGAACTGGTAAAGCAGGAGATCTT AATTTTCTTGATTCTTTGGTCAATTGCACATCTCTACAGGTTCTACGCCTCGGAACGAATCGCTTTGGTGGAGTGTTGCC TGATTCAATTGCTAATTTCTCAACCCAATTGTACACATTTGCCTTTGGTTCCAATGAAATACGAGGAAATATACCTGCTG GGATTAGCAATCTTGTTAACTTGACCCTTTTATCATTGGAAGGAAACCACTTAATTGGTAGTGTTCCTGATGCAATAGGC AAGCTGCAAAATCTGCAAGAGTTGTATCTCAATGTCAACAACTTTTCAGGAAGAATCCCATCCTCTTTAGGAAATTTGTC TTCAATAAATAAACTCTTTCTGGAGGAGAACAACTTTGAAGGAAGCATACCTTCAAGTCTTGGAAAGTGCAAGGAGTTAT TGGTGTTTAGCCTTTATCGTAACAAGCTTAGAGGCACAATACCAAAAGAAGTTTTTAGCCTTTCTTCACTATCAATATAT TTGGATGTGTCTTACAATGCTTTGTCAGGGACACTGCCTGTTGAAGTGGGTAAGCTGCAAAACCTTGGAGAGTTGGTGCT GTCTGGTAACAACTTCTCAGGAGTCATTCCATCTTCTCTTGGCAGCTGCATTAGCTTGGAAAAGCTGCGTTTGCAGGGTA ACTCTTTCCAGGGAAACATTCCTCAAAGTTTGAAGGATTTGAGAGGTTTACTTGATATAGATCTTTCGCGCAATAACCTG TCTGGTAAGATTCCTGAGTTTCTTGGTGAGTTCACACAACTCAAGCGCCTTAATCTTGCTAACAACAGTTTTGAAGGTGA AATACCAATGAATGGAATCTTCAAGAATGTAACTTCCATTTCATTATATGGAAACAGCAAGCTCTGTGGTGGTGTCCCAC AATTGAATTTTCCTTCATGCACTGTGAGGAAAACCTCTTCCTTAAGAAAACTTCTTTCCCCTAAGGTGGCTATCCCTATA GGTATTGCACTTGTTCTTGTCCTCTTGATGTCATGTTTTCTTACAATCTTCCTCATTGTGAAAAGAGAAAAAAAGAGAAC TTCATTATCAACTACCTCCTTGGAATTGGGATTTTCTTACTCAGAAATTGCAAATTGCACTGGTGGGTTCTCCCAGGATA ACTTGGTTGGCTCAGGAAGTTTTGGTTCTGTATATAAAGGAACTCTTTCAGGTGATGGACCAATTGTTGCAGTGAAAGTG TTGAATCTTCAACAAAGAGGGGCTTCGAGAAGCTTCATTGATGAATGCCATGTTCTGAGGAATACAAGGCACCGCAACCT TCTCAAGATCATAACTGCCATCTCAAGTGTTGATCAACAAGGTAATGAGTTCAAGGCTCTAGTCTTTGAGTTCATGTCTA ATGGAAGTCTAGAAGATTGGTTGCATCCAATTAGTAACCTTCAATCTCAAACCAAGACATTGAAATTTATCCAGAGACTG AACATTGCAATTGATGTTGCTTGTGCCCTGGAATATCTCCACCACTCGGGTGAAACACGAATTGTTCATTGTGATATAAA GCCAAGCAATGTTCTTCTTGACAATGATTTGGTAGCCCATGTTGGTGACTTTGGTTTAGCTACATTTCTGTTTGAAGAAC CAAGCAATTTTTCCAAACAATCAATCATGTCAGCTAGCCTAAGGGGTTCTATTGGATATGTCCCTCCAGAGTATGGCATG GGTGGAAAGCCTTCTACGCTTGGAGATATCTACAGTTACGGAATACTATTACTTGAGATCTTCACAAGAAAAAGACCAAC TGATGAAGCATTTGAAGGTGGCATGGGAATTCGCCAGTTTATAGCAATGGCTCTACCTAACAATGTCATGGATGTAATTG ATCCTTCATTTATCTGTGAAGATGAATTTGATGATGAAAGTGAAGAATTTGAAGAAAATGAAGAAGAAGAAAGAGCTATT AGGGGAAACTATGAGATTGAAGTCCATGGTAAAGGTTTGTTGGAGGCTTGCATTGTATCAGTGATGGAAATTGGAGTGTC TTGCTCAGCAACTGCTCCAAGTGAACGGATGCCAATCACTGCAGTGGTTAAAAAACTGCATGCTATCAAGAACTCACTTA TAAAGAAGAAGGATAAAGTATAA
Protein sequence (LotjaGi1g1v0439300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNHFCANSKSLLLQTLNGFLLLCMISSLHLVTTATSEENETDLSALLDFKSKIVGDPFNIMSSWNNSFHHCNWTGITCNI SNGRVMNMNLAKLRLKGTLSPSIGNLTFLTTLNLLNNSFHGEIPQELGRLHYVQTLEFAFNDFGGNIPNNLSHCTQLLSL GFGANNLTGTIPNWIGNISSLTRLSFALNNFHGSIPHEVGLLSSLTQLLLYGNFLSGTVPSSIYNLSSLFYFTLTQNNLH GSLPSDVGFTLPNLEVFAGGVNNFTGNVPASLLNASKLVVLDFSVNALTGSLPKNIGALNRLTRLSFEHNRLGTGKAGDL NFLDSLVNCTSLQVLRLGTNRFGGVLPDSIANFSTQLYTFAFGSNEIRGNIPAGISNLVNLTLLSLEGNHLIGSVPDAIG KLQNLQELYLNVNNFSGRIPSSLGNLSSINKLFLEENNFEGSIPSSLGKCKELLVFSLYRNKLRGTIPKEVFSLSSLSIY LDVSYNALSGTLPVEVGKLQNLGELVLSGNNFSGVIPSSLGSCISLEKLRLQGNSFQGNIPQSLKDLRGLLDIDLSRNNL SGKIPEFLGEFTQLKRLNLANNSFEGEIPMNGIFKNVTSISLYGNSKLCGGVPQLNFPSCTVRKTSSLRKLLSPKVAIPI GIALVLVLLMSCFLTIFLIVKREKKRTSLSTTSLELGFSYSEIANCTGGFSQDNLVGSGSFGSVYKGTLSGDGPIVAVKV LNLQQRGASRSFIDECHVLRNTRHRNLLKIITAISSVDQQGNEFKALVFEFMSNGSLEDWLHPISNLQSQTKTLKFIQRL NIAIDVACALEYLHHSGETRIVHCDIKPSNVLLDNDLVAHVGDFGLATFLFEEPSNFSKQSIMSASLRGSIGYVPPEYGM GGKPSTLGDIYSYGILLLEIFTRKRPTDEAFEGGMGIRQFIAMALPNNVMDVIDPSFICEDEFDDESEEFEENEEEERAI RGNYEIEVHGKGLLEACIVSVMEIGVSCSATAPSERMPITAVVKKLHAIKNSLIKKKDKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 36 | 36 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 30 | 30 | - | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| SignalP_EUK | 1 | 36 | 36 | - | – | |
| Phobius | 11 | 22 | 12 | - | – | |
| Phobius | 23 | 30 | 8 | - | – | |
| PANTHER | 27 | 134 | 108 | 0.0 | – | |
| PANTHER | 27 | 134 | 108 | 0.0 | – | |
| Gene3D | 31 | 91 | 61 | 1.0E-6 | ||
| Phobius | 31 | 635 | 605 | - | – | |
| SUPERFAMILY | 39 | 312 | 274 | 1.5E-47 | – | |
| Pfam | 40 | 79 | 40 | 2.8E-11 | ||
| Gene3D | 92 | 316 | 225 | 2.8E-58 | ||
| SMART | 106 | 130 | 25 | 350.0 | ||
| PANTHER | 133 | 272 | 140 | 0.0 | – | |
| PANTHER | 133 | 272 | 140 | 0.0 | – | |
| SMART | 202 | 226 | 25 | 150.0 | ||
| SUPERFAMILY | 250 | 595 | 346 | 1.33E-59 | – | |
| PANTHER | 261 | 1012 | 752 | 0.0 | – | |
| PANTHER | 261 | 1012 | 752 | 0.0 | – | |
| Gene3D | 317 | 621 | 305 | 3.8E-85 | ||
| SMART | 378 | 401 | 24 | 97.0 | ||
| SMART | 402 | 426 | 25 | 52.0 | ||
| SMART | 499 | 523 | 25 | 47.0 | ||
| Pfam | 525 | 583 | 59 | 7.1E-7 | ||
| SMART | 571 | 596 | 26 | 100.0 | ||
| Phobius | 636 | 660 | 25 | - | – | |
| TMHMM | 638 | 660 | 23 | - | – | |
| Phobius | 661 | 1020 | 360 | - | – | |
| SUPERFAMILY | 668 | 1006 | 339 | 1.75E-63 | ||
| Gene3D | 673 | 771 | 99 | 9.5E-21 | – | |
| ProSiteProfiles | 690 | 1010 | 321 | 33.644 | ||
| SMART | 690 | 1010 | 321 | 9.7E-24 | ||
| Pfam | 691 | 909 | 219 | 1.9E-39 | ||
| ProSitePatterns | 696 | 719 | 24 | - | ||
| ProSitePatterns | 821 | 833 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0439300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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