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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0457000 |
| Transcript ID | LotjaGi1g1v0457000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT3G56370.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9LY03|IRK_ARATH Probable LRR receptor-like serine/threonine-protein kinase IRK; TrEMBL-Plants: tr|G7KY56|G7KY56_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0457000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:96034467..96037600) extracted from Lotus japonicus Gifu genome v1.2.
AAGAAGATGATGATGCAATTCAGCAAATGCATACATCTATTGTTGTTTCTGATTGTTTTTGTTCAAGTTCTGCTACCAGT GTTCTCTGGTGGCCCTGGTTTCAGTGATGATGTATTGGGGTTGATTGTGTTCAAAGCTGGTTTACAAGACCCAAATCACA GACTCTCTTCATGGAATGAGGATGATTACAGTCCCTGCAACTGGGAAGGTGTGAAATGTGATCCTTCCACCAACAGGGTC TCTTCTCTTATCCTTGATGGGTTCTCTCTTTCTGGGCATGTTGATAGAGGCCTCTTGAATTTGCAGTCCCTTCAAATTCT CTCACTTTCTGGTAACAACTTCACAGGGCCTATAAACCCTGATCTCCCTCACCTTTGGAATCTGCAAGTTGTGGATTTCA GTGACAACAATCTCTCTGGGACAATCCCAGAAGGGTTTTTTCAACAATGTGGGTCTCTCAGATCAGTTTCCTTTGCTAAG AACAACCTCACAGGTAAGATTCCTGATTCTTTAACCTCCTGCAACACATTGTTAACTGTTAACTTTTCATCCAATCAACT TTATGGAGAATTGCCATCTGGGGTGTGGTCTTTGAGGGGATTGCAATCACTTGATCTGTCAAATAACCTTCTTGAGGGAG TGATTCCTGAGGGAATTCAGAATCTTTATGATATGAGGGAGTTGAGGTTACAGAAGAATCATTTTACTGGGAAAGTTCCT GAGGATATTGGATGGTGCATACTTCTGAAATCACTTGACTTGAGTGACAATTTTCTCTCCGGGGAGCTTCCTCAGTCGAT GCAAAGACTCACTTCATGCAAATCACTTAGTTTGAATGGAAATTCATTCACAGGAAGCATTCCTGAATGGATTGGAGAGT TGAAAGATCTAGAGACATTGGATCTTTCTGCAAATAGATTTTCTGGTTGGGTTCCAAATTCATTAGGAAATCTAGACTCA CTGAAAAGATTAAATTTATCCAGGAACCAGTTCACAGGAAACTTGCCTGATTCAATGGTGAATTGCACTATGCTTTTGGC TCTTGATATCAGCCACAATCAGTTAGAAGGCCTTCTTCCTTCATGGATTTTTGGGATGGATTTACAAAGTATCTCTCTTT CTGGGAACAGCTTCAATCCTTCACTCAAGTCCACACCTTCATATTATCATGGTATTGAGGTTTTGGATTTGTCATCCAAT GCATTTTCTGGTGAACTCCCATCTGGGATTGGTAGTCTTATTAGTTTGCAAGTGTTAAATATGTCCACGAACAATATATC TGGTCCTATTCCTGTGGGCTTAGGAGAACTTAAATCAACATACATTATTGATTTAAGTCGTAACAAACTTAATGGAAGCA TCCCTTCTGAAATAGCCGGAGCAATTTCGCTCATTGAACTGAGGTTACAAAAGAACCACCTAGGTGGGAGAATTCCAGCC CAAATTGAGAAGTGTTTATCTCTAAAATCTTTGTAAGCTCTCTAATATCACAGTTGCTCTTATTTCATGCTTTGTTCTTA ATTACTTAGTCTGATTTGTGTTGACAGATTAGAAAACAATATTTGCTTATTTTAAGGATAATGGTGAAATTGACATGTCT AGTTAAAAGTTTGTTTGACTAAGCATGCTCTAAAGGGTCCGATTTTCTTTTCCTTCTAATTTTGTGCTTTTCAATTGAAT TGTGCAGGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTAACCAATCTTCAACATGTA GATTTTTCATGGAATGAACTCTCTGGAAGTTTACCCAAGGAGCTGACAAATCTTTCCCATCTTTTATCATTTAATGTATC CCACAACCACTTTCAAGGTGAGCTACCAGTTGGTGGCTTCTTCAATACCATCTCTTCCTCTTCTGTAGCGGGTAACCGAC TGTTGTGTGGTTCTGTTGTCAACCACTCCTGCCCATCTGTTCACCCAAAACCTATTGTATTAAATCCCAATTCTTCCGGT TCCAACTCTAGCATTGCCTCGCACAATCATCGCCACAAGATCATACTGAGTATATCGGCTCTTATTGCTATTGGAGCAGC TGCTTTTATTGCCATTGGTGTGGTGGCTATTACTGTCCTAAACGTCCGTGTGCGTTCTTCAATGGCGCGTTCCGCAGCTC CGTTTGCATTCTCTGCTGGTGAGGACTATAGTAATTCACCGGCAAATGATCCAAACTACGGCAAGCTTGTCATGTTTTCT GGTGATGCAGACTTTGCTGATGGAGCCCATAACCTTCTTAACAAAGACAGTGAAATAGGACGTGGCGGGTTTGGAGTTGT TTACCGCACATTCCTTCGAGACGGACACGCTGTTGCAATCAAAAAGCTTACAGTCTCAAGTTTGATCAAGTCTCAAGAAG AATTTGAGAGGGAAGTTAAAAAGCTTGGGAAGATCAGGCACCAGAATGTTGTAGCACTCGAAGGTTATTATTGGACTTCA TCCTTGCAGCTACTCATTTACGAGTACCTATCGAAAGGAAGTTTGCATAAGCTTCTACATGATGATGATAACAGCAAAAA TGTCTTCTCGTGGCGACAAAGGTTCAAGATTATCCTCGGCATGGCGAAAGGGTTAGCCCATTTGCACGAGATGAACATGA TCCACTACAATCTCAAATCAACCAATGTTCTGATTGATTGTTCTGGTGAGCCAAAAATCGGAGATTTCGGCTTGGTGAAG CTCTTGCCAATGTTAGACCACTGTGTTCTGAGCAGCAAGATTCAAAGCGCGCTCGGATACATGGCGCCTGAGTTTGCTTG CCGCACAGTTAAGATAACCGAGAAATGCGACGTGTACGGTTTCGGGATCCTGATTCTCGAGGTCGTGACCGGAAAAAGAC CGGTGGAGTACATGGAGGATGATGTTGTGGTTCTGTGTGAATTGGTGAGGGGTGCATTGGAGGAAGGGAAAGTGGAGCAA TGTGTTGATGGGAGGCTATTGGGTAATTTTGCTGCGGAGGAAGCGATTCCTGTGATGAAATTGGGGTTGATTTGTGCCTC ACAAGTGCCATCAAACCGTCCTGATATGGCTGAGGTATTGAATATATTGGAGTTAATCCAATGCCCTTCAGAAGGACAAG AGGAATTAGAGTGA
CDS sequence (LotjaGi1g1v0457000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGCAATTCAGCAAATGCATACATCTATTGTTGTTTCTGATTGTTTTTGTTCAAGTTCTGCTACCAGTGTTCTC TGGTGGCCCTGGTTTCAGTGATGATGTATTGGGGTTGATTGTGTTCAAAGCTGGTTTACAAGACCCAAATCACAGACTCT CTTCATGGAATGAGGATGATTACAGTCCCTGCAACTGGGAAGGTGTGAAATGTGATCCTTCCACCAACAGGGTCTCTTCT CTTATCCTTGATGGGTTCTCTCTTTCTGGGCATGTTGATAGAGGCCTCTTGAATTTGCAGTCCCTTCAAATTCTCTCACT TTCTGGTAACAACTTCACAGGGCCTATAAACCCTGATCTCCCTCACCTTTGGAATCTGCAAGTTGTGGATTTCAGTGACA ACAATCTCTCTGGGACAATCCCAGAAGGGTTTTTTCAACAATGTGGGTCTCTCAGATCAGTTTCCTTTGCTAAGAACAAC CTCACAGGTAAGATTCCTGATTCTTTAACCTCCTGCAACACATTGTTAACTGTTAACTTTTCATCCAATCAACTTTATGG AGAATTGCCATCTGGGGTGTGGTCTTTGAGGGGATTGCAATCACTTGATCTGTCAAATAACCTTCTTGAGGGAGTGATTC CTGAGGGAATTCAGAATCTTTATGATATGAGGGAGTTGAGGTTACAGAAGAATCATTTTACTGGGAAAGTTCCTGAGGAT ATTGGATGGTGCATACTTCTGAAATCACTTGACTTGAGTGACAATTTTCTCTCCGGGGAGCTTCCTCAGTCGATGCAAAG ACTCACTTCATGCAAATCACTTAGTTTGAATGGAAATTCATTCACAGGAAGCATTCCTGAATGGATTGGAGAGTTGAAAG ATCTAGAGACATTGGATCTTTCTGCAAATAGATTTTCTGGTTGGGTTCCAAATTCATTAGGAAATCTAGACTCACTGAAA AGATTAAATTTATCCAGGAACCAGTTCACAGGAAACTTGCCTGATTCAATGGTGAATTGCACTATGCTTTTGGCTCTTGA TATCAGCCACAATCAGTTAGAAGGCCTTCTTCCTTCATGGATTTTTGGGATGGATTTACAAAGTTATTATCATGGTATTG AGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGAACTCCCATCTGGGATTGGTAGTCTTATTAGTTTGCAAGTGTTA AATATGTCCACGAACAATATATCTGGTCCTATTCCTGTGGGCTTAGGAGAACTTAAATCAACATACATTATTGATTTAAG TCGTAACAAACTTAATGGAAGCATCCCTTCTGAAATAGCCGGAGCAATTTCGCTCATTGAACTGAGGTTACAAAAGAACC ACCTAGGTGGGAGAATTCCAGCCCAAATTGAGAAGTGTTTATCTCTAAAATCTTTGATTCTTTCTCACAACAAGCTTACT GGTTCAATCCCTGCAGCCATTGCAAACCTAACCAATCTTCAACATGTAGATTTTTCATGGAATGAACTCTCTGGAAGTTT ACCCAAGGAGCTGACAAATCTTTCCCATCTTTTATCATTTAATGTATCCCACAACCACTTTCAAGGTGAGCTACCAGTTG GTGGCTTCTTCAATACCATCTCTTCCTCTTCTGTAGCGGGTAACCGACTGTTGTGTGGTTCTGTTGTCAACCACTCCTGC CCATCTGTTCACCCAAAACCTATTGTATTAAATCCCAATTCTTCCGGTTCCAACTCTAGCATTGCCTCGCACAATCATCG CCACAAGATCATACTGAGTATATCGGCTCTTATTGCTATTGGAGCAGCTGCTTTTATTGCCATTGGTGTGGTGGCTATTA CTGTCCTAAACGTCCGTGTGCGTTCTTCAATGGCGCGTTCCGCAGCTCCGTTTGCATTCTCTGCTGGTGAGGACTATAGT AATTCACCGGCAAATGATCCAAACTACGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCCCATAA CCTTCTTAACAAAGACAGTGAAATAGGACGTGGCGGGTTTGGAGTTGTTTACCGCACATTCCTTCGAGACGGACACGCTG TTGCAATCAAAAAGCTTACAGTCTCAAGTTTGATCAAGTCTCAAGAAGAATTTGAGAGGGAAGTTAAAAAGCTTGGGAAG ATCAGGCACCAGAATGTTGTAGCACTCGAAGGTTATTATTGGACTTCATCCTTGCAGCTACTCATTTACGAGTACCTATC GAAAGGAAGTTTGCATAAGCTTCTACATGATGATGATAACAGCAAAAATGTCTTCTCGTGGCGACAAAGGTTCAAGATTA TCCTCGGCATGGCGAAAGGGTTAGCCCATTTGCACGAGATGAACATGATCCACTACAATCTCAAATCAACCAATGTTCTG ATTGATTGTTCTGGTGAGCCAAAAATCGGAGATTTCGGCTTGGTGAAGCTCTTGCCAATGTTAGACCACTGTGTTCTGAG CAGCAAGATTCAAAGCGCGCTCGGATACATGGCGCCTGAGTTTGCTTGCCGCACAGTTAAGATAACCGAGAAATGCGACG TGTACGGTTTCGGGATCCTGATTCTCGAGGTCGTGACCGGAAAAAGACCGGTGGAGTACATGGAGGATGATGTTGTGGTT CTGTGTGAATTGGTGAGGGGTGCATTGGAGGAAGGGAAAGTGGAGCAATGTGTTGATGGGAGGCTATTGGGTAATTTTGC TGCGGAGGAAGCGATTCCTGTGATGAAATTGGGGTTGATTTGTGCCTCACAAGTGCCATCAAACCGTCCTGATATGGCTG AGGTATTGAATATATTGGAGTTAATCCAATGCCCTTCAGAAGGACAAGAGGAATTAGAGTGA
Protein sequence (LotjaGi1g1v0457000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMQFSKCIHLLLFLIVFVQVLLPVFSGGPGFSDDVLGLIVFKAGLQDPNHRLSSWNEDDYSPCNWEGVKCDPSTNRVSS LILDGFSLSGHVDRGLLNLQSLQILSLSGNNFTGPINPDLPHLWNLQVVDFSDNNLSGTIPEGFFQQCGSLRSVSFAKNN LTGKIPDSLTSCNTLLTVNFSSNQLYGELPSGVWSLRGLQSLDLSNNLLEGVIPEGIQNLYDMRELRLQKNHFTGKVPED IGWCILLKSLDLSDNFLSGELPQSMQRLTSCKSLSLNGNSFTGSIPEWIGELKDLETLDLSANRFSGWVPNSLGNLDSLK RLNLSRNQFTGNLPDSMVNCTMLLALDISHNQLEGLLPSWIFGMDLQSYYHGIEVLDLSSNAFSGELPSGIGSLISLQVL NMSTNNISGPIPVGLGELKSTYIIDLSRNKLNGSIPSEIAGAISLIELRLQKNHLGGRIPAQIEKCLSLKSLILSHNKLT GSIPAAIANLTNLQHVDFSWNELSGSLPKELTNLSHLLSFNVSHNHFQGELPVGGFFNTISSSSVAGNRLLCGSVVNHSC PSVHPKPIVLNPNSSGSNSSIASHNHRHKIILSISALIAIGAAAFIAIGVVAITVLNVRVRSSMARSAAPFAFSAGEDYS NSPANDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQEEFEREVKKLGK IRHQNVVALEGYYWTSSLQLLIYEYLSKGSLHKLLHDDDNSKNVFSWRQRFKIILGMAKGLAHLHEMNMIHYNLKSTNVL IDCSGEPKIGDFGLVKLLPMLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEVVTGKRPVEYMEDDVVV LCELVRGALEEGKVEQCVDGRLLGNFAAEEAIPVMKLGLICASQVPSNRPDMAEVLNILELIQCPSEGQEELE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 8 | 23 | 16 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 24 | 27 | 4 | - | – | |
| Phobius | 28 | 589 | 562 | - | – | |
| PANTHER | 30 | 940 | 911 | 0.0 | – | |
| PANTHER | 30 | 940 | 911 | 0.0 | – | |
| Gene3D | 32 | 191 | 160 | 3.3E-42 | ||
| Pfam | 34 | 72 | 39 | 1.6E-12 | ||
| SUPERFAMILY | 48 | 362 | 315 | 1.5E-58 | – | |
| SMART | 123 | 147 | 25 | 48.0 | ||
| Gene3D | 192 | 284 | 93 | 8.0E-28 | ||
| SMART | 196 | 219 | 24 | 9.7 | ||
| PRINTS | 199 | 212 | 14 | 8.4E-5 | – | |
| Pfam | 199 | 220 | 22 | 0.18 | ||
| SMART | 220 | 244 | 25 | 290.0 | ||
| Pfam | 247 | 268 | 22 | 0.41 | ||
| Pfam | 272 | 329 | 58 | 9.2E-9 | ||
| Gene3D | 285 | 366 | 82 | 1.5E-25 | ||
| SMART | 292 | 315 | 24 | 17.0 | ||
| PRINTS | 292 | 305 | 14 | 8.4E-5 | – | |
| SUPERFAMILY | 298 | 553 | 256 | 1.84E-56 | – | |
| SMART | 316 | 340 | 25 | 24.0 | ||
| Pfam | 339 | 354 | 16 | 1.9 | ||
| Gene3D | 367 | 440 | 74 | 1.5E-18 | ||
| SMART | 394 | 418 | 25 | 61.0 | ||
| Gene3D | 441 | 566 | 126 | 2.6E-32 | ||
| Pfam | 468 | 527 | 60 | 2.4E-6 | ||
| SMART | 490 | 513 | 24 | 86.0 | ||
| SMART | 514 | 538 | 25 | 85.0 | ||
| Phobius | 590 | 616 | 27 | - | – | |
| TMHMM | 596 | 618 | 23 | - | – | |
| Phobius | 617 | 953 | 337 | - | – | |
| Gene3D | 656 | 745 | 90 | 1.1E-20 | – | |
| ProSiteProfiles | 669 | 942 | 274 | 35.623 | ||
| SUPERFAMILY | 670 | 943 | 274 | 2.08E-66 | ||
| Pfam | 670 | 877 | 208 | 2.2E-42 | ||
| ProSitePatterns | 675 | 698 | 24 | - | ||
| Gene3D | 746 | 951 | 206 | 2.0E-50 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0457000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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