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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0545100 |
| Transcript ID | LotjaGi1g1v0545100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA ligase; TAIR: AT1G66730.1 DNA LIGASE 6; Swiss-Prot: sp|F4HPZ9|LIG6_ARATH DNA ligase 6; TrEMBL-Plants: tr|A0A0L9TDF0|A0A0L9TDF0_PHAAN DNA ligase; Found in the gene: LotjaGi1g1v0545100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107437610..107451847) extracted from Lotus japonicus Gifu genome v1.2.
CCCATCTCTTATTTCTATCTATCTATTGAGTGTGTAAGTGTATTAGGTGTGAAGAAATTTTTTCCCCAAATTCTCTGGTT TTGTGGTGAACACAAGTTTTGTACTTTTGGCGCCTTAACTACAAACAACCAGCTTCTACAATCAAACCCAATGATATAAA GCAGAAACAGAAACTGCTTCCCATTCCCCATTCCTCATCATCATTGAGCCAAAACATGCTTAACATTTTCCTCACCAAGT CTGAACCTTTCATTCATTTTCTCTTTCTTTGAAATGGAAAATTCCCAATTCAAACCCAAAACCCTAAATCTAGACTCCAC CCACTTGTTCCTCTCCGCTCTCCAATCCCTCCAACTCCCACCGCAAACCTCCTCCTCCACCACCACCACCGCCATTCCAC ACTCCAAACTCATCCCCAACACCCGCTTCCTCGTCGACGCCTTCCGCCACGGCAGCAGCGGCGGTGGTGGCTCCTTCTCC GTCGCCTACTTTCTCTCCCACTTCCACTCCGACCACTACGCCGGCCTCTCCCCTTCCTGGTCCCACGGCGTTGTCTTTTG CTCCCCCACCACCGCAGAACTCCTCCTCCACGTCCTCCGCGTCCCCTCCCCCTTCGTCCACCCTCTCCCCCTCAACCAAC CCGTTTGTATTGATGGTTCCGTGGTCACCCTCATTGACGCCAACCACTGCCCTGGTGCTGTCCAGTTCCTCTTCGAGGTC CCCGCTCCCGACGGAACCTGCCGCAGGTAGTGCAAGCATTCTGAGCTCAAGTTGATTTGAGTTAATAATAATGAAATTAA TGTAAATGTGTTAAGTTTTTCCAAAAATGGATGAAAAACGTTGAGGGGCGCGTTCAAAAGAGTGTATTGCTAGCGCTCAT CAGAATCAAATTAGTTATTTAATCAGATGACTTTAGCCATATTATCATACTAGCTCTTAAATAATTGAAATTGCCTTTTG AATATATATTTTGTCAGGCAATTTGGTTCTTGGATAGAGTATCTTAGGGACTGATAACAAGACATTATTCAAGGACTTTT TATGTACAATGTCCAATTTTGCAGGACGGATGAAAAATTATATCTTTTATGGATTAGTCTGACTATTTACTTATTAGAAT TTGTGTTCTCATCTGAAAATTATATAGGAATAGGAACAGCTTGTTCAGACAAGCAATCTAACTATCTTCTCCTCCAAGGG TTGTTAAGCACGACTAACTCTATAACTGCCAGGTCGATTAATTAAAGCTGACATGAGTGGTGTTGCATTTTATTTCTGAT GAAGTGTCTTCTAATGGCAGGTATGTTCACACGGGAGATTTCCGGTTTTGTCGTTCGATGTTGGCTGAGCCTGCGCTTGC TCCTTTTGTTGGTGCCGATGCTGTGTTTTTGGACACCACTTACTGTCACCCGAAGTTTGTGTTTCCTGCACAAGAGGAGT CTGTTGATTATGTTGTTAATGTTGTGGGTGAGTGTGACGGTGATGATGTCTTGTTTCTGGTTGCTACTTATGTTGTTGGG AAGGAGAGGATTTTGCTTGAGCTTGCGCGAAGATTTAACAAGAAGGTGCTGGTGGATGCTAGGAAAATGGAGGTTTTGCG AGTTCTTGGGTATGGGGAAAGTAGTGAATTTACTGAGGATGGATTGGAGACTAACATTCATGTTGTTGGGTGGAATGTGT TGGGGGAAACTTGGCCCTATTTTAGGCCCAACTTTGTTAAAATGAAGGAGATTATGACCGAGAGAGGGTACTCAAAGGTT GTGGGTTTTGTGCCAACCGGATGGACCTATGAAGTGAAACGCAGTCGGTTTGCTGTCAAGTCCAAGGATTCGTGTCAGAT TCATCTCGTTCCTTATAGTGAGCATTCAAACTATGAAGAGCTCAGGGAATATGTAAAGTTTCTGAAACCGAAGCAGGTTA TTCCCACCGTGGGTTTAGATGTCGAGAAAAGTGATAGCAAACACGCTAACAAAATGAGGAAGTATTTTGCTGGATTAGTT GATGAGACAGCCAACAAGCAGGAGTTTTTAAAAGGTTTTCGTCGTGGCACCAGTGAAGTGGGTTTAAAGGGTGAGAAGGA TGTTAGCGACGTTCTGGAACAAGGACAGATCCAGGAGAAAGAAGTCAAGCCATCTGATGCAGATGGGGAAACGTGTGCAA AAGATCCTACTTTACTAAATGATGAAGAAAAAGAGAAAATCATTCAAGAACTTAGTTGTTGTTTGCCCTCATGGGTCACT CGAAGCCAGGTGTTAGATCTGATCAGTATCTCAGGGAGCAATATTGTTGAAGCTGTTTCTAATTTCTATGAACGTGAAAC TGAATTTCATGATCAAGTAAATTCTAGTCAAACTTCAGTTTCAACATCCAAGTGCTGCTCATCAGATGACACTGATTCAC TTCCAAAGTCATGCCTTAATACAAACAGTACTCCCTTAAATGTTGACATTTTTCCTAGTCAAGACTCTAAATTAACTAAA CTGAGGAATACAGTACCAAGTCGCATTTCCCCTGCCAAAAGAAAAAGTAGTGAAAGTAAGCCAAACAAGAAAGTAAAAGT CAAAGCAAAATCAGAATCAAGTGGTTCAAAGCAGTCAACTATAACAAGATTCTTCGGCAAAGTAACGCCTGAGGTGCCTG GTGGGACTCATTCTGATCATGCTGGGTCAAAGCTTGATGAAAGTCCTAAAGTTGAAGAGTTGTTGCAATCTGATGTTGAA AAATTGTACAAGGATGAGATTGATCAGTTTATGCAAATAATAAATGGAAACGAGTCTTTAAAAAGAGATGCCATCACTAT AATTAAAAAGGCAAAAGGAGATGTCAATAAGGCCTTAGACATATATTACTGCAATTCTGGCCATCTTGGTGAAAATGAAA TATCAGCTCAAGAGGAGTGCAAAATCGACAGACCTTTAGAAAAGAAGTATGTGTCACAGGAAATGAGAGTTGTACATGAT ATTTCTGTGCAGAAAGTGTTAAGAAATAGTGTAGATGCAACTCATTTATCTTTACCACCTGAGAAATACAACCCTAAGGA ACATGGTTTGTGTTAATTTTTCCCCAAGTGTCTTGGTTTAGAAGGAGTTTTCGACTTACTGCACTTACTGTTATATACAT TCATTATGTTCAAAATCTGTCTTGTAAAGTATGTTACAATGGCATAAATGAGCAGCTTGTTGGGGAGATGGACAGCCTGC GCCATATTTACATCTTGCACGAACCTTCAATCTGCTTGAGGAGGAGAAAGGAAAGATAAAAGCTACTTCAATGTTGTGCA ATATGTTTAGAAGGTCCTTTGATACTGATCATAGTCTTTGTATTATCTGTTTTCTCCCTCATTTTTACGGAATAATGAAA CAATTTTACCATTAGTTGGCTGATTTTTGAATATTATCTGCATGTAACTTGTCTATCACACAGTTTGTTGGCCTTGTCAC CAGCAGATGTGCTTCCTGCTGTGTATCTATGTACAAACAAAATTGCTGCAGACCATGAAAATGTGGTAGGTTTATTTCTA GTCTTGATAATTTGGAAACAATGGCTTTCGCCATGATTGCACTTTATTTTCCTAGTGGAGGTGAAGAGGAACCCATACTT GTAATGAATAAAATAGCCATTAAAATCCAGAAGCCAATTCAAAGGTCCCTTTATTGAGAAAAAATTAACTTTTTTTGTAA AAGTACAGTGTTGTTTCTTCTTGTTAATAATTTTTGTTTCTTTATCTCTTACCGATGATAAATTAACATTTGTTTGACAA GTATAAGAATCTACTATTTGGCAATAAAGGCTATTATGCACTAAGAAATTTTGATTTGTTATGCAATTCATGCAGGAACT AAATATTGGTAGAAGTTTAGTCACTACAGCACTTGAAGAAGCATGTGGAACAAATCGATTGAAAATAGGGGAGATGTATA ACAAATTTGGTGACCTTGGTTGGATGATTGTTCTCATAGTTTTAGACACTTTTTGCTAAACCTACTCAGTCTGACAATTT GGAATAACTATGAAATAACCTGGGATTGTTATAGGTGATGTGGCTCAAGAGTGTCGTCAAACACAGAGATTGCTTGCACC ACCTACACCACTTCTAATTAAGGAAGTTTTCTCTGCACTACGAAAGATGAGGTATTAACAATCGTTTTGTTTCTTATTGT AACATTTAACATTACTAGGGATATAATTTACCTCTAAATGGTTTGCTGTAAAAATGTTTAGTTGGGAGTTCTTACTATGA ACTTAGGTTCAGGGTAAGGATGTTGGTCACTAGGATTAGCTTTTTGGCAGTCAGAGTTGGTGATATTAACCTTCTCATTG AGTGTAATATCAATTTATGTCTTGTCCTCTTCGTGATCCACACCCTGGGAAGTTGTTCTACATATTTTAAACATTTGAAA GGAGCTCCAGGTTGTGGCATTTTACACAATTAGGAGATCAATTTGTGGTTATGACGTCTTTGTTGGTGGTACTTGTTTCT TGGAACCAGGGCTCCAAAACCATACAATGATGAATCTAAAGAGACCAAATGTATATATTAAGCCTGGTTGTAACTTGTAA CATTTATTTCTCTTACTTTCGCATTTTTCTTCCCTATTAATTCTATCGTTTTCCTACTGCTATTTTGTTCTGTAAACTTT TAGCTTTGTTTTAGATGTTCTTATGTGGTGCTCATCAGTGTACAAACAGGCAATGGAAGCACAGTTCGGAAGAAAGGCAT CATCGTTCATCTCATGCGGTCTTGCCGGGAGAAGGAGATGAAGTTTCTTGTTCGGACATTGGTAAATATCTCTTTTTTTT GTGCATAAAAGTTTAAAAGAAGGGAAGGTTATCACATTTTGAGGTTATGGTATGCCCCAAGCCTCATAAGAGCTTCCATT GGTGTTTATCTACTGTGCACCTTCAAGTTGGAATCTGACAGCTCTGATAGTTCCAATAGTACATGACTTAAAGTAATAGT CTTAACTTATGTTGGCATGCAGGTTAAAAGGTCAAAAGGTACAATCGTGGACATTGATTTCTTGGACCTCCATTTGCTTT AGTGATTAAACTCTAAGCAGATTTTAAATGACAAGTCTTTATGTTTATCAGGCTTCTATTGTCCACCTCTTTCATATATG TTGTTAAGTTAGTTCATCGGTAGCCATACCTGGCTAGACAGTATGGTCTTCTCTCTCAATGCATTGTGTGTGTGTGTGTG TGTGTGTGTGATGGTGGCTGATAGTATGGTTCGGTAGCCATACCTGGCTAGGCAGTATGGTCTTGTTAGAACCCAATTGC AAGATATGGGACTTGAGTCCCACATTGGAATATGGGATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACAA CAGCTAGCTTTTGTGGTATGGTTCTCTCAAGGTTCTTATCAATTGGTATCAGAGCCTTCCACCATGTCTCTCAGCTGCAA ACGAGCGGCGCGGGTGGTGACGCCGGCATTGCAGTGTCCGCCCAGCTACAATAGCTAGCTTTTGTGCGAGCCCAAGGCCT TATAAACCCCCACATTAGAATTTCATACTTCCAATGTGTGACTCAAGTCCTATACTCTGCAATTAGGCCTTCTCTCTCGA CGCATTGTGTTTCAATGTTTACTATTCTCCCTCTCTCTCTCTCCCTCTCTCTCCATGTGTGTGTGATGATGGCTGATACA TAGTATGTTTCTCAAATGCTTTTTCCCCTAGGTTTTTATCCCTCTGTGCTAGTTTCCTGGTCCTCAAATTTGCGTCTTCT GTAGGTCAGGAACTTACGGATTGGGGCAATGCTTAGAACTGTTTTGCCTGCATTGGCTCATGCTGTTGTTATGAATTCTC GTTCTACTGTGGATCAAGAAGGAACTGCAGATAATTTGAAGAATAAACTTCAGGTCAATTCTGAAATCAATTGTTTTTAC CCATGACCAAGTTTAATTTGCCATTTTACTATCCTGTCTGCTTTTAATGGTCTATGTCATTTTGGTTGCACTAGTTACGT TTCATTTTCCGTATGTAGGGGTGCTTTCATTAATGTTAGAACCGGAGCTAGGATAGGGTAACTGATAGGGAATAGGGATT TCAGAGACTATACTGGAAAAATAGTGTATTAATTCAGGGGAATCCTGGTATGAATGCCAGAATCCCTTTAAGGAATTACA ATAGCAGAAAGGAAATACAGGAAAAAGTGATAACCCAGGAACAGATTCGAGAGCGTTCCTATCTCTCCTAGTCCTAACAG AATTTCTGCCTAACCTCACTCACCCCCCTCTTGGTGCTTTTACACACCACCTGGCCTGATTCTCTGCAGAGAGAATCTGC CAGCTCAGCAATTGGTTACACTACTCATCAGTAGTAGTGGGACTATTGTTTATTCCCACCTTGCCCCTACGCTTGTAAAC TTTAGAGAAATCCTTGCTCTTACTTACAGCAAGGTCCCTATCAGTAACCTTATTGGAGATAAGGTTATCGTACAAGGACA TCATCAATATAGTAACTCCTTTAAATCCCTCTATATATCTAGCAAAAAGACACCCTAAGTTTTCCTTTTCAATAGTAGAA GAAATGTTATCAGATTAGAGGGAAAAAGTTCAGAAACAGAGGATAGTAAATTCTCCATCAAGAAAGGAAAAGAAATTAAG ATAATACAAGATGGTCAAACAAGAAAGCTCATCAGTTATGCAAAGCTTGGCAGACCTACCCTTCTGTTACTTGCTCTGAA TTATTGCTTGTTGAGATCCCATATAGACTAAAGATATGACCAAAGTAGCGTATAGAAATAGCCATCTATTTGCTATGTCC TATGTACGACAAAAATGCTCTAGAAGAAGTAGCCATGTTTATTTTACTAATTATTTCCCTCATCTCTCCAGGTCCTTTCT GTGGAAGTTGTTGAAGCATATAATATTCTGCCAAGTTTGGTAAGTGTTGAATATTTGAATGAGTATTACCTATATATAAA TTTTATGAGGGAAACCATAGCATTATTGCAAACATTAGACTGTTATCTACACTACTCTCTCACTCTCACTCTCTCTCTCT CATATACTAGAAGATAGGAAGCTAGGCTCTGAGTGTTCCTTTGTTTGTGTTTCTCAATTCTGTCGTTGATGGTGAGAAAG CAGAAAATATGACCAGCTTTAAAAATATGACCAAACACTACGTTGGATATACTGCTGATGTGTGGTTTGTGTGAATATGC TATAGTTTTGTTTATTTTAAATAGTTCAGAATTTATCTTGATGGTCTGTTGTATCTGTTTGGTAAATTCAGACTTGTTGA GAACAAACTATGTAGTTTTCTCCCTATGTGAGTAATAATGTAGTACTCATGATATTTCAATTTCTCATCATCATTTACTT TATGCAGGATATCATAGTCCCATCTCTCATGAGCAAAGGCATTGATTTTTCGGTTTCAAGTTTATCAATGGTTCCAGGAA TCCCTATTAAGCCTATGCTTGCAAAGTATGCAGTATTTAATATATTGGCCCTTTCTTGAAACAATTTTTAATTATATTTC AAGGTTTTTAACCTTCTTTTCTTAACTTACATCTGTACCCATATACTTTGTTAACACCCCTAGTTCTTTATACTTTGTAT TTTGCTTCTTTTTTTTCTTCATAGGATCACCAATGGCATTCCCCAAGCATTGAAGCTATTTCAAAATAAAGCATTTACAT GTGAATATAAGTATGTACTATCCTTTAATTAGTTATTTTCCTTTGGCATCTCATTGCATGCAATCATGAACATTAGAAAG CAAGCAATCCTTTAAAATATTGGTTGGAATATAATATTGATGGGTAATGTTGAATAACAAGGAGACAATCGGCATTTGGT GAATCCACTTAAGGTGTTATTTACATTTTCAAATTGGCAAAATGGTCTTGAAGGTAGGAGTGCTGCCGTAAGGCAGAATC ATTGGATTATTGCAAATTTGAAACTCAACTTTCTAACATTTCATCATTAAAATTTCAAAATGCTACTTTGATTTCCAATT TATCTTTAAAAAAATTTACCTTGATATATTGCTGTTTACTTCATTAGTCTGTAGTTTGTGATTGGCAGTTCACATAATTC TAAGCTAGTTCCTGATGCATTATTACATCTGTCGATATTTACAATCAACACATCCCTTTCTTTTATGACCATTTCATAAA CTCAATCTGGCATATTTGATCATATAGTAAACTTATGGTGGGGGAAAACTGGTAACACACATAGTACAATGATTATTTGC ATTGTTATAAGGAAAATACAGCAATAAGAAATGAAAATATTCAAATCACTTCATTTTCAAACAGTAAATTTTGTAATTTT AGTTTTATCTCCAACTTGTAAAGTTTATCTAACCCTGAATTTCTTTTGTGGATTTCTTCTGGTCTTGTTTTCTTATTCTA CTGGTAATGGTTTTGAACTTGGTGATTTTGTTGAATATTCAGGTCCCTTTGCATTACATGTCTCTCTTTTACAAGGATGA ATTGCACCTCTCTTTTGTATCACTTGCTGAGTTGAGTTAAATGTAATTCCAGGTATGATGGTCAGCGAGCTCATATCCAC AGATTAGTTGATGGTTCAATTCGTGTCTTTTCAAGAAATGGAAATGAATCAACTTCTAGATTTCCTGATCTGATTGACAT AATTAAGCACTCCTGCAAGCCTGTTGCATCAACTTTCATAATTGATGCAGAGGTACACAAATATTTTCTGCCATAGTATA CTTTGTATTTGTTCTTGTTTTCTGCCATAGTATACTTTGTATTTGTTCTTGTTTTCTGCCATGGTATACTTTATATTAGT TCTTGTTATTTAAGTTTCTGTTATTCACTCCTAATTTTGTGGTTCTTGTCCCTTTCAGGTTGTTGGTATTGATAGAAAAA ACGGAAACAGAATTATGTCTTTTCAGGAGCTATCTTCACGTGGGAGAGGAAGCAAAGATACTTTAGTTACTGCAGAGAGC ATAAAGGTTGGAAATTAGCATGCTTAAAAGAAAGTGAAAAGTATTTATGCCTTAAGCCATAGACACTTCACAAGGAGAAA ACAATTACAAAGTGAAAGGAGGACAACGATTCCTCCTACTCTGTCATCTTTTTGTACATTAAGTAGAATTCTCTAATACT AAGTGATCCCAAACCAACTTGTGAGAAATATTGACACATTAAAAATGAGAATAATAGACATGAAAGATAATACGAAGTAA TTTAGGATACAAAAACTAGACAACTAAATTACTACATTTATGAAATGGGTAAACCACCTTTATAATGGAATAAGGCCTTA TATGTCCGTAAAATTTCCACATATTCTATAACTTCGTCACTCTTAAATCTTCATTCCTTGCTCAAACATTGCTGATATAT AGAACTATGGTTAATTTAATTTATTGTTTGAAGAATCTGGATGTGAATCGGTAGAGTTGGTTGATCAGTGGACTGGATAA TCTTTTATATAACCAATCTATGTGTATAATAACATTAAAGAACCAAGCTGATCCAGAACTCAACAAAAATTCTCTGAAAT TGTTTCATTGATCAATGCTAATGTCTTGTGAAATCTGGGGTTGAAGAGTAGTTCTAAGTTTCTCTCAATGTTATTAAGTA AAATTCCCTAATTGACAATTTGACATAACGCTTCAATCCCATGCCAACACGGTGAAGTGGATAGTATTTTGGTAGTGTTA AAGAAAGTACAATATTTTGGTATATAGTTTTTAAAATATTATTTGTCATTTAGTCCATATAAACCATATTCTTCCTAGGT GCCTTTTTCTTTTAATAAGTTATCACAATCTAAGTATTTTGAAACCTACTGACTGAGGAATACTGATGCTAAGAGCTTTC GCTGATTGCTCTTCTTTTGTGTTTCAAACTTAGCTTTTATTAATTCCCAGGTTAGCCTTTTGCCCTCTCTCTCTCTCTCT CAATATTTGCAAATTCTCTTTCTCTTTCCTTTATTCTCCTTATTACCCCACTGTTGAAATCTGAATTTATGGCAACTTAG CTGCTCTAGATGTCTAAAATGCTACAACACATGCCTTTAGGTATAACATGCAATGTGATCCCTTTGACAGTTTTGATGAC TTCAGTTGTTTCTGGATCCAGCCAGGTTAAAGGATTGGGATAGTTTGAATGACAATAATTAGTTTATGGCAGTGTTCTTT TACATGTTATGGCAAGTTTCATATAAATATCTCAACACAGTGCATGTTGTTATGGTGTGCTCTGTGGACAGTGTCAAACT AATTGTTGTTTCAGGTTTTTATTATTTGGATCAAAACCATTCTTTAAGTATCATAGGGATGTTACATGATTCACTTCCTT AGAAATTCAGCAGTTTTATTGGCTTATTTATTTGAAGGGTTTAGGATGATAAACATATTTATATATTTGGTATTGTCAAG AACATGGTTTTAGAAGGATTGGAGAGCTCTATTTAGCTAATGCTTTTTTCTTCTTTATGGAATTTCCTTGTATTTTGGTT TCTTGAGTGGTTTATAAGTGTGAGGACCCATACACCCATTGCCTTAAGGTTTTGGGTGAAAGATGTGATGTCTGGTCCAC TTATGGTTTGCTCTTTAGCCCAATGTGGAGTTTTATCCCCCAGTTTTAAATCATCTCCTTTGTTTGGCTCTTTCTTTGGT CCAACAAGTGGTATCAGAGCCTCTATGACCGAGAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTGAAGAGT GGAATTTAATTAAGCACATGGTAGGTGGGCTTGTGCATTTATCCCCGCTTCAAGCCCAAAGGCTCTTGCATGAGGGGGCG TGATAGAATATAATATAAAACCATTAAAGTAGCCCTTACCCAACAGCTTAAGCTTTTGGGATAAGTGGTTGTTATACAGG TTTCTTATCTTCCTTTGTACTTGTCTAGTTCTCTTCTTAAACTCTCTTTCTATTTGAATTCTCTGGATTTGTTTCTGATA TCTTCTGTTCATGCAGGTTGGCATTTGCGTCTTTGTCTTTGATATCATGTTCGCAAATGGAGAGCAGTAATAATTCCAAA CTTTCTTTTATGAATTTTATGATAATTAGTTGCAAACTTAGTAGAAAGTCTCGTGGAACACATACAAATGATTCTGTTTG CAAGTGGTCTCTTGAATGCATTGGCCTTGTATGTTTCACCTATAACGGTGGATAGTATAGTACAGATAATAGGGGAGTAT AGGCTATACTATACACCTGATAAGCTTTTAGTTTGGCATATTTTAGGCATACCAATGTATGGTGTGCAAGATGCTGTAAT TAATGCTATCTTGTGTATGGATCGTGAAAACCAGATAGGGTAAAAATTTGTGACATTTTCTTATTAATCATGCTAGTGCA GTTAATCAGTGATGATCAAGATTTTGGATTTTCAGATAGAAGGAAAGTAGGTCTATTTAGGCTGTATTGATTTATTCTTA TGATATTTAAGACACTCAGGTCATCCTTGTTAAGCAGTTGATATTGCTTTTCAGATACAGTCTTTGCTGACCCATTTGAG TGCTATTTGCAGGTTATTGGGTTCTCCTCTCCGCCTAAGACGAAAGTGTATACATCTAGTCATCTTATTAAATTAGAAAT CTTCTTGATTCTCAGGCAAGACAAAAATGTACTGTGACACATAATTACACTTTTGTTTTAACCCTGTTTTTCTTGGACAT TATGCAGATCTGAAGGATTTGTTCTTGGATGAAAAGCCTGGGTATTTCGAATATGCGAAAGAAATAACTGTAAGTGTATT AATTTTTTTTATTGTTCTGAATTAATTATCTAAGTTGTTGGGTGAAGAAACATAAATGATTTTATATTTATATTTCTAGC CATGAATTTTTATTTTATAGTAAAACTCATTTAATGCAGTTATATTCATATGAACACTTCAATTGTAGATTGAAGCAGAT GATGCTTGCTTAACATCTGAAGCCACATTAACTAAGATAAATGCTTTCCTGGAAGATGCACTTCGCTCTTCTAGTGAAGG AATTATGGTGAAAACACTGGACGATGATGCTGGGTATTCTCCATCAAAGCGTTCTGATAGATGGTTAAAGGTAATTATTT TGGCCAGTGAGACTTTGGCTGTTTTGTTTGTATCTGTAATATGTTTCTGAGGCTTCGTTTTGTAGGTCAAGCGAGATTAT GTGGAAGGATTAAATGATACTCTTGATTTAGTGCCAATTGGTGCTTGGCATGGGAATGGAAGGAAAGCTGGATGGTAATT TATCATTTTTCATATTTTTCCACTATCTTTTGAAATTATTGAGATGTTTCACTCAATGAAACGAGAATTAAATTTAAAGT ATTTTATTTCACATCACTACATTAGTTCTATTGAGGACTAACTCTTCTGCTTTATTATGTTTGAATATTCGTTGGCACCA GTACAAACAAATATTAGCACATACTTTAAGACAAAAAGTAAATGAAACTCTCAACTTATTGATTGAGACAAAAATCCGTT CATGTTGCGCTCATCTAGTATCCAAAGACACGCTAAGGTTAACGGTGGAGGCCTAAGAGTGGTTTTAGCAATTCCATTTC CTTGTCATTCAGGCACCAATGATAAGTAAAGAAATTTATGCAAAGGAGAAGTTTTGGGTGAAAGATCTGTGCTATGTACT ATCAGAGCTAAATGCTCTGGAGTTGTGAAATAACATTTGTGTTCATAAGTCTATTACTAACTGGGTGATGTGCCTTATGT GATTACTTGACTTTGTTAACATGAATCAAATGGAAAACGAAATGGCAGAAAAAAGGAATATGCAATCAGTGATTTCATTA TGAATTTTTCTTATAAGAAAGTGAATTACTTCATTGTTGTTTATATGGATCTTTTACTGTTGCAGGTATAGTCCATTTCT TATGGCATGTTTCAATCCTGAAACTGAGGAGTATCAAAGTGTATGTCGCGTGATGTCGGGGTTCTCAGATTCATTTTACA TAGAGGTATATATGGTATTGCCTTATTCATTGTATGATTTATTTTAGAAATATAATATAAAATCATTCATATATTTTCAC CCAATAGCTTAAGTTTTTTGGATAGTTAGTTAAGACATAAAACCAGTGCCTCTATGACTAAATAATCCAGAGTTTGATCC TTGTTACCCCCATTTTCTAGGCATTTGCTTTGACCTACTAGCTGCATTTAGCATATACTTGGCTAGAGCGGAGAGAGAAA AGAGTGGTGGTGACGGTGGGAAAATCTTTCAGTACTCCTGTTATACATATTCCCCATCTTAAAGCATAACACCTAACATG TAAAGTAATTTATTCCCCATTATAGTTATTTCTATAATTAAAAAATTATAACTATCACATTTGAGAGAGGTCTACCGTCT TCAGTACTACATGAGTATTGCTCGTAGGGGGTGGGTGCGGAGAAAGAGGAGGATGTTAGTGAGAAGCTAAATCATACAGA AAATTGGAAAAGTTTTAATTCATATCATGAAATACACGCTGTTGTAACTTGTAACTACACAAGACTAAAGTGGTCCCTTG CCAGTTTTACAACTAATCCAATTTCGAAACATCCGTAAAATGCTGCATTAACTTAAGGTCTACAATGTGCTCACTATTGC TCTCTTTTCCTTTCTGAATTTTTTAACTTGATGGCAATATTCTTTTATCATCACTGACAAGAACACTGACATTGCACTGC AGATGAAAGAATTCTTCTCTGGAGACAGAGTCTTACTAAAAAAACCACCATATTATCAAACAGGAGAGACACCTGACATG TGGTTTTGTCCAGAACTTGTTTGGGAAATAAGAGGTGCAGACTTCACAGTATCCCCAGTTCATCATGCTGCCATGGGTTT AGTTCATCCATCTCGAGGCATCTCTATCAGATTTCCAAGATTTATTGGCTCTGTGTCAGATAGAAATCCAGAAGAATGTA GCACAGCTTCTGATATAGTTGAAATGTTTCATTCTCAGACTCGGAAGATGGATGTCACAGCTGATAGTTGAATGTTGATT TATTTTCTGTGTATGAGTTTACTGAAGATGTTTTAATAGTTTGTGTGTACAGTCTATTGTTCTTAACATAGTATCCCTTT TTGGCTTGTAGGCTTCATAGATATGTAGCTTTGTAATATGGGTTTTGTTTCTCCCATATATAACTTCAATGCTCTTTTTA AAAATCCATTTAATTAAAAAGGTTGCATTTTAATTCATTCAGAAACTCTTTTCAAAATTAAACAAGTGGTTAGCTTTA
CDS sequence (LotjaGi1g1v0545100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATTCCCAATTCAAACCCAAAACCCTAAATCTAGACTCCACCCACTTGTTCCTCTCCGCTCTCCAATCCCTCCA ACTCCCACCGCAAACCTCCTCCTCCACCACCACCACCGCCATTCCACACTCCAAACTCATCCCCAACACCCGCTTCCTCG TCGACGCCTTCCGCCACGGCAGCAGCGGCGGTGGTGGCTCCTTCTCCGTCGCCTACTTTCTCTCCCACTTCCACTCCGAC CACTACGCCGGCCTCTCCCCTTCCTGGTCCCACGGCGTTGTCTTTTGCTCCCCCACCACCGCAGAACTCCTCCTCCACGT CCTCCGCGTCCCCTCCCCCTTCGTCCACCCTCTCCCCCTCAACCAACCCGTTTGTATTGATGGTTCCGTGGTCACCCTCA TTGACGCCAACCACTGCCCTGGTGCTGTCCAGTTCCTCTTCGAGGTCCCCGCTCCCGACGGAACCTGCCGCAGGTATGTT CACACGGGAGATTTCCGGTTTTGTCGTTCGATGTTGGCTGAGCCTGCGCTTGCTCCTTTTGTTGGTGCCGATGCTGTGTT TTTGGACACCACTTACTGTCACCCGAAGTTTGTGTTTCCTGCACAAGAGGAGTCTGTTGATTATGTTGTTAATGTTGTGG GTGAGTGTGACGGTGATGATGTCTTGTTTCTGGTTGCTACTTATGTTGTTGGGAAGGAGAGGATTTTGCTTGAGCTTGCG CGAAGATTTAACAAGAAGGTGCTGGTGGATGCTAGGAAAATGGAGGTTTTGCGAGTTCTTGGGTATGGGGAAAGTAGTGA ATTTACTGAGGATGGATTGGAGACTAACATTCATGTTGTTGGGTGGAATGTGTTGGGGGAAACTTGGCCCTATTTTAGGC CCAACTTTGTTAAAATGAAGGAGATTATGACCGAGAGAGGGTACTCAAAGGTTGTGGGTTTTGTGCCAACCGGATGGACC TATGAAGTGAAACGCAGTCGGTTTGCTGTCAAGTCCAAGGATTCGTGTCAGATTCATCTCGTTCCTTATAGTGAGCATTC AAACTATGAAGAGCTCAGGGAATATGTAAAGTTTCTGAAACCGAAGCAGGTTATTCCCACCGTGGGTTTAGATGTCGAGA AAAGTGATAGCAAACACGCTAACAAAATGAGGAAGTATTTTGCTGGATTAGTTGATGAGACAGCCAACAAGCAGGAGTTT TTAAAAGGTTTTCGTCGTGGCACCAGTGAAGTGGGTTTAAAGGGTGAGAAGGATGTTAGCGACGTTCTGGAACAAGGACA GATCCAGGAGAAAGAAGTCAAGCCATCTGATGCAGATGGGGAAACGTGTGCAAAAGATCCTACTTTACTAAATGATGAAG AAAAAGAGAAAATCATTCAAGAACTTAGTTGTTGTTTGCCCTCATGGGTCACTCGAAGCCAGGTGTTAGATCTGATCAGT ATCTCAGGGAGCAATATTGTTGAAGCTGTTTCTAATTTCTATGAACGTGAAACTGAATTTCATGATCAAGTAAATTCTAG TCAAACTTCAGTTTCAACATCCAAGTGCTGCTCATCAGATGACACTGATTCACTTCCAAAGTCATGCCTTAATACAAACA GTACTCCCTTAAATGTTGACATTTTTCCTAGTCAAGACTCTAAATTAACTAAACTGAGGAATACAGTACCAAGTCGCATT TCCCCTGCCAAAAGAAAAAGTAGTGAAAGTAAGCCAAACAAGAAAGTAAAAGTCAAAGCAAAATCAGAATCAAGTGGTTC AAAGCAGTCAACTATAACAAGATTCTTCGGCAAAGTAACGCCTGAGGTGCCTGGTGGGACTCATTCTGATCATGCTGGGT CAAAGCTTGATGAAAGTCCTAAAGTTGAAGAGTTGTTGCAATCTGATGTTGAAAAATTGTACAAGGATGAGATTGATCAG TTTATGCAAATAATAAATGGAAACGAGTCTTTAAAAAGAGATGCCATCACTATAATTAAAAAGGCAAAAGGAGATGTCAA TAAGGCCTTAGACATATATTACTGCAATTCTGGCCATCTTGGTGAAAATGAAATATCAGCTCAAGAGGAGTGCAAAATCG ACAGACCTTTAGAAAAGAAGTATGTGTCACAGGAAATGAGAGTTGTACATGATATTTCTGTGCAGAAAGTGTTAAGAAAT AGTGTAGATGCAACTCATTTATCTTTACCACCTGAGAAATACAACCCTAAGGAACATGCTTGTTGGGGAGATGGACAGCC TGCGCCATATTTACATCTTGCACGAACCTTCAATCTGCTTGAGGAGGAGAAAGGAAAGATAAAAGCTACTTCAATGTTGT GCAATATGTTTAGAAGTTTGTTGGCCTTGTCACCAGCAGATGTGCTTCCTGCTGTGTATCTATGTACAAACAAAATTGCT GCAGACCATGAAAATGTGGAACTAAATATTGGTAGAAGTTTAGTCACTACAGCACTTGAAGAAGCATGTGGAACAAATCG ATTGAAAATAGGGGAGATGTATAACAAATTTGGTGACCTTGGTGATGTGGCTCAAGAGTGTCGTCAAACACAGAGATTGC TTGCACCACCTACACCACTTCTAATTAAGGAAGTTTTCTCTGCACTACGAAAGATGAGTGTACAAACAGGCAATGGAAGC ACAGTTCGGAAGAAAGGCATCATCGTTCATCTCATGCGGTCTTGCCGGGAGAAGGAGATGAAGTTTCTTGTTCGGACATT GGTCAGGAACTTACGGATTGGGGCAATGCTTAGAACTGTTTTGCCTGCATTGGCTCATGCTGTTGTTATGAATTCTCGTT CTACTGTGGATCAAGAAGGAACTGCAGATAATTTGAAGAATAAACTTCAGGTCCTTTCTGTGGAAGTTGTTGAAGCATAT AATATTCTGCCAAGTTTGGATATCATAGTCCCATCTCTCATGAGCAAAGGCATTGATTTTTCGGTTTCAAGTTTATCAAT GGTTCCAGGAATCCCTATTAAGCCTATGCTTGCAAAGATCACCAATGGCATTCCCCAAGCATTGAAGCTATTTCAAAATA AAGCATTTACATGTGAATATAAGTATGATGGTCAGCGAGCTCATATCCACAGATTAGTTGATGGTTCAATTCGTGTCTTT TCAAGAAATGGAAATGAATCAACTTCTAGATTTCCTGATCTGATTGACATAATTAAGCACTCCTGCAAGCCTGTTGCATC AACTTTCATAATTGATGCAGAGGTTGTTGGTATTGATAGAAAAAACGGAAACAGAATTATGTCTTTTCAGGAGCTATCTT CACGTGGGAGAGGAAGCAAAGATACTTTAGTTACTGCAGAGAGCATAAAGGTTGGCATTTGCGTCTTTGTCTTTGATATC ATGTTCGCAAATGGAGAGCAGTTATTGGGTTCTCCTCTCCGCCTAAGACGAAAGTATCTGAAGGATTTGTTCTTGGATGA AAAGCCTGGGTATTTCGAATATGCGAAAGAAATAACTATTGAAGCAGATGATGCTTGCTTAACATCTGAAGCCACATTAA CTAAGATAAATGCTTTCCTGGAAGATGCACTTCGCTCTTCTAGTGAAGGAATTATGGTGAAAACACTGGACGATGATGCT GGGTATTCTCCATCAAAGCGTTCTGATAGATGGTTAAAGGTCAAGCGAGATTATGTGGAAGGATTAAATGATACTCTTGA TTTAGTGCCAATTGGTGCTTGGCATGGGAATGGAAGGAAAGCTGGATGGTATAGTCCATTTCTTATGGCATGTTTCAATC CTGAAACTGAGGAGTATCAAAGTGTATGTCGCGTGATGTCGGGGTTCTCAGATTCATTTTACATAGAGATGAAAGAATTC TTCTCTGGAGACAGAGTCTTACTAAAAAAACCACCATATTATCAAACAGGAGAGACACCTGACATGTGGTTTTGTCCAGA ACTTGTTTGGGAAATAAGAGGTGCAGACTTCACAGTATCCCCAGTTCATCATGCTGCCATGGGTTTAGTTCATCCATCTC GAGGCATCTCTATCAGATTTCCAAGATTTATTGGCTCTGTGTCAGATAGAAATCCAGAAGAATGTAGCACAGCTTCTGAT ATAGTTGAAATGTTTCATTCTCAGACTCGGAAGATGGATGTCACAGCTGATAGTTGA
Protein sequence (LotjaGi1g1v0545100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENSQFKPKTLNLDSTHLFLSALQSLQLPPQTSSSTTTTAIPHSKLIPNTRFLVDAFRHGSSGGGGSFSVAYFLSHFHSD HYAGLSPSWSHGVVFCSPTTAELLLHVLRVPSPFVHPLPLNQPVCIDGSVVTLIDANHCPGAVQFLFEVPAPDGTCRRYV HTGDFRFCRSMLAEPALAPFVGADAVFLDTTYCHPKFVFPAQEESVDYVVNVVGECDGDDVLFLVATYVVGKERILLELA RRFNKKVLVDARKMEVLRVLGYGESSEFTEDGLETNIHVVGWNVLGETWPYFRPNFVKMKEIMTERGYSKVVGFVPTGWT YEVKRSRFAVKSKDSCQIHLVPYSEHSNYEELREYVKFLKPKQVIPTVGLDVEKSDSKHANKMRKYFAGLVDETANKQEF LKGFRRGTSEVGLKGEKDVSDVLEQGQIQEKEVKPSDADGETCAKDPTLLNDEEKEKIIQELSCCLPSWVTRSQVLDLIS ISGSNIVEAVSNFYERETEFHDQVNSSQTSVSTSKCCSSDDTDSLPKSCLNTNSTPLNVDIFPSQDSKLTKLRNTVPSRI SPAKRKSSESKPNKKVKVKAKSESSGSKQSTITRFFGKVTPEVPGGTHSDHAGSKLDESPKVEELLQSDVEKLYKDEIDQ FMQIINGNESLKRDAITIIKKAKGDVNKALDIYYCNSGHLGENEISAQEECKIDRPLEKKYVSQEMRVVHDISVQKVLRN SVDATHLSLPPEKYNPKEHACWGDGQPAPYLHLARTFNLLEEEKGKIKATSMLCNMFRSLLALSPADVLPAVYLCTNKIA ADHENVELNIGRSLVTTALEEACGTNRLKIGEMYNKFGDLGDVAQECRQTQRLLAPPTPLLIKEVFSALRKMSVQTGNGS TVRKKGIIVHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVVMNSRSTVDQEGTADNLKNKLQVLSVEVVEAY NILPSLDIIVPSLMSKGIDFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFQNKAFTCEYKYDGQRAHIHRLVDGSIRVF SRNGNESTSRFPDLIDIIKHSCKPVASTFIIDAEVVGIDRKNGNRIMSFQELSSRGRGSKDTLVTAESIKVGICVFVFDI MFANGEQLLGSPLRLRRKYLKDLFLDEKPGYFEYAKEITIEADDACLTSEATLTKINAFLEDALRSSSEGIMVKTLDDDA GYSPSKRSDRWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQSVCRVMSGFSDSFYIEMKEF FSGDRVLLKKPPYYQTGETPDMWFCPELVWEIRGADFTVSPVHHAAMGLVHPSRGISIRFPRFIGSVSDRNPEECSTASD IVEMFHSQTRKMDVTADS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 35 | 228 | 194 | 0.0083 | ||
| CDD | 41 | 195 | 155 | 5.25076E-76 | – | |
| Gene3D | 47 | 368 | 322 | 2.5E-99 | ||
| SUPERFAMILY | 49 | 369 | 321 | 3.37E-38 | ||
| Gene3D | 198 | 346 | 149 | 2.5E-99 | – | |
| Pfam | 265 | 369 | 105 | 3.0E-22 | ||
| PANTHER | 422 | 1377 | 956 | 0.0 | – | |
| PANTHER | 422 | 1377 | 956 | 0.0 | – | |
| MobiDBLite | 502 | 525 | 24 | - | – | |
| MobiDBLite | 503 | 525 | 23 | - | – | |
| MobiDBLite | 551 | 621 | 71 | - | – | |
| MobiDBLite | 564 | 582 | 19 | - | – | |
| Gene3D | 725 | 997 | 273 | 2.6E-89 | ||
| SUPERFAMILY | 729 | 978 | 250 | 1.83E-69 | ||
| Pfam | 749 | 925 | 177 | 4.7E-36 | ||
| TIGRFAM | 807 | 1365 | 559 | 2.3E-120 | ||
| CDD | 986 | 1218 | 233 | 3.59371E-101 | – | |
| SUPERFAMILY | 989 | 1221 | 233 | 1.41E-41 | – | |
| Pfam | 995 | 1215 | 221 | 1.3E-45 | ||
| Gene3D | 1006 | 1219 | 214 | 1.7E-62 | – | |
| ProSitePatterns | 1019 | 1027 | 9 | - | ||
| Gene3D | 1024 | 1155 | 132 | 1.7E-62 | – | |
| ProSiteProfiles | 1106 | 1253 | 148 | 34.702 | ||
| Gene3D | 1220 | 1378 | 159 | 1.8E-57 | – | |
| SUPERFAMILY | 1224 | 1368 | 145 | 1.59E-40 | ||
| CDD | 1224 | 1367 | 144 | 2.4541E-78 | – | |
| Pfam | 1241 | 1348 | 108 | 2.4E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA ligase activity | Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+. | ||
| Molecular function | DNA ligase (ATP) activity | Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | ||
| Biological process | DNA ligation involved in DNA repair | The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair. | ||
| Biological process | DNA biosynthetic process | The cellular DNA metabolic process resulting in the formation of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one. |
Expression pattern of LotjaGi1g1v0545100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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