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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0292300 |
| Transcript ID | LotjaGi2g1v0292300.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase-like protein; TAIR: AT3G24240.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q9LHP4|RCH2_ARATH Receptor-like protein kinase 2; TrEMBL-Plants: tr|G7JZ57|G7JZ57_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi2g1v0292300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76675845..76679703) extracted from Lotus japonicus Gifu genome v1.2.
TTCAATTCAATGCTGAGCTCGAGGCAATCCTTCTACACCTCTTCCTTGTCCTCATCACTATTATGTATCATTCTTCTCCA AGCTAATCTTCTCTATGGCCTTGCCTTCTCTGCTAACCATGAAGCCTCAACTCTCTTCTCATGGCTCCATAGTTCTTCTT CATCATCACCACCCCCTCCATCTTTCTCTAACTGGAATATTCTTGATAACAATCCATGCAACTGGACCTGTATTACATGC TCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCACCCCTCTTGAGCTTCCCGTACTTTTCAATCTCTCTTCATT CCCCTTTCTTCACAAGCTTGTAATTTCTGATGCCAATCTCACTGGAACCATCCCAGTTGACATTGGTGATTGCTCTGCTC TCTATGTTATTGACCTGAGCTCCAACAATCTTGTTGGTTCTATTCCTGCAAGCATTGGCAAACTCCAGAAACTGGAGAAT TTGTCTTTGAACTCTAACCAGCTTACTGGGAAAATTCCAGATGAGATAAGCAACTGCATTAGTCTGAAAAATCTTCTCCT TTTTGATAATCAGCTAGATGGGACTCTCCCACCTTCTCTGGGAAAGTTGTCAAAACTTGAGGCTCTCAGAGCAGGAGGAA ACAAAGGTATAGTTGGAGAAATCCCTGAAGAGCTTGGAGAATGCAGAAATTTGACTGTGTTGGGGTTGGCTGATACAAGA ATATCAGGTTCTTTGCCTGCTTCTTTGGGTCAGCTTAGAAAGCTTCAAACTTTGTCAATCTATACCACTATGCTATCTAG TGAAATTCCACCAGAGTTAGGTAATTGTTCTGAACTTGTTGACTTGTTCCTATATGAAAATAGCCTATCAGGGTCTATTC CACCTGAGCTTGGCAAGTTAAAAAAGCTGGAGCAGTTGTTTCTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAG ATTGGTAACTGTTCAAGCTTGAGGAATATTGACCTCTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTGGGGGG TCTTTTAGAGCTTGAAGAGTTCATGATTAGTGATAACAATGTGTCTGGCTCTATACCATCAAGTCTCTCAAATGCTAAAA GTCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTGATTCCACCAGAGCTTGGGAAGTTGGAAAATCTATTA GTGTTCTTTGCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCAACTTTGGGAAACTGCAGCAATTTACAAGCGCTGGA CTTGTCTCGCAACGCGCTCACTGGTAGCATCCCTGGTGGCCTATTTCAGCTCCAAAACCTCACAAAGCTACTTCTCATTT CCAATGACATATCAGGTTTTATACCATCAGAAATAGGAAGCTGCAGCTCACTCATAAGGTTGAGGCTTGGAAACAACAGG ATCACGGGCAGCATACCTAAGACAATTGGCGGCCTCAAAAGCCTGAACTTCTTAGATCTCTCCGGGAACCGCCTCTCCGG GCCAGTGCCTGATGAGATTAGAACCTGCACAGAACTGCAAATGATAGACTTCAGCAGCAACAGCTTAGAAGGTCCACTTC CAAATTCTTTGTCATCACTGTCTTCACTGCAGGTACTAGATGCATCTTCAAACAAATTCTCAGGTTCCGTACCGGCGAGT TTAGGCCGTCTTGTTTCTTTAAATAAGCTAATCCTAGAGAATAACTTATTCTCTGGAACCATTCCTGCATCCCTTAGCAT GTGCTCAAATCTCCAACTACTTGATCTCAGTAGCAACCAACTCACTGGAAGCATACCAGCAGAGCTTGGCCATATAGAGA CACTAGAAATTGCTCTTAATCTTAGTTGCAATTCACTTAGTGGAGCAATCCCAGATCAGATATCTTCTCTCAACAAGCTT TCCATACTTGACCTTTCACATAATCAATTAGAAGGAGATTTGCAACCACTTGCTGAGCTTGATAACCTTGTCTCCCTCAA TGTTTCTTATAACAAATTAAGCGGATACCTACCAGATAACAAGCTTTTCAGGCAGTTATCATCGAAAGACCTCACTGGAA ATCAAGGGCTATGCAATTCAGGTGAAGACTCATGCTTTGTAAAGGATTCTGCCAAGGATGATATGAAATTGAATGGAAAT GATGCAAGGAAGTCACAGAAGCTCAAAATAACCATTGGATTGCTGATAGCCTTAGCAGTGATAATGTTAGTTATGGGGGT AACTGCTGTGGTCAAAGCAAAGAGAACAATCAGAGATGATGATTCAGAATTAGGAGACTCATGGCCTTGGCAATTCATAC CATTCCAGAAGCTAAGTTTTTCAGTTGAACAAATTCTAAGATGCTTAGTTGATAGGAATATAATTGGGAAGGGATGTTCC GGTGTTGTTTATCGCGCTGAAATGGATACTGGTGAAGTCATTGCAGTGAAGAAACTATGGCCAATAACAAATGATGCTGC AGTGGATGTTTTCAAGGAAGATAAAAGTGGAGTTCGCGATTCGTTCTCAGCTGAGGTGAAGGCCCTTGGCTCGATTCGGC ACAAGAACATTGTCAGGTTCTTGGGTTGTTGTTGGAACAGGAGAACAAGGTTGCTTATCTTTGATTACATGGCAAATGGA AGTTTAAGCAGTTTACTTCATGAGAGGAGTGGGAATTCTCTAGAATGGGAACTCAGGTACAGAATCTTGTTAGGTGCTGC AGAAGGTTTGGCTTATCTGCACCATGACTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTG GCCTTGAATTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAGCTGGTTGATGATGGTGATTTTGGTCGTTCTTCCAAT ACAGTTGCTGGTTCCTATGGATATATTGCTCCAGGTTAGTGTGCCTTCCACACAAACTTCGATCACATTCTTTTCAAATT CTTATGCTTTTATAGGTGTAGGTAACTAGTTATAAGGAACAAATTTAGCAAGTATTGAATTAGATACGGTTGACAAATCC CACATAGACTAGAGATATGGTCAAAATGGTCCTTATAAAGAGTAGAGAAAGAAAAACCCTCATCTTTGAGACTTTGAGCT AGCTTTGGGAGTTGAGTTAGGCCTAACCCAAATTCTAATAGATACAATTAATATCTTGGTTGAAAGGAAAACAAATGTCA GAAAACTGGACCATAGCATGATTTCCAAACATTCTACTACTCTTTTGTTTTAGAAAGCTTCATATAGTTACTTCCACACA ACTGGTTGGATTTTTTCTCATCACATGTTACATCTCTTAACACATTTTACAAAATTTGTTTAGCATCTTGAAGCTGACTT TGAATTTATCTCAGAATATGGCTACATGTTGAAGATCACAGAGAAGAGTGACGTTTACAGCTATGGTGTGGTGTTGCTGG AAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAGG GGTATTGAAGTGCTTGATCCAAGCTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCACTGGGAATAGC CTTGTTGTGTGTGAATTCATCCCCTGATGAGAGGCCAACAATGAGAGATATAGCCGCAATGCTCAAGGAGATAAAGCATG AGAGGGAGGAATATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATAGAAGCTGTGGAGGTGGTGGTGGAGTT CTGGCAACATCTTCATCAGTATCAAGAAGCAACAACACAAGCTTCTCTGTGTCTTCTCTGCTTCATTCATCTTCAAGTGC CAACCTGAGTTTCAAATGA
CDS sequence (LotjaGi2g1v0292300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGAGCTCGAGGCAATCCTTCTACACCTCTTCCTTGTCCTCATCACTATTATGTATCATTCTTCTCCAAGCTAATCT TCTCTATGGCCTTGCCTTCTCTGCTAACCATGAAGCCTCAACTCTCTTCTCATGGCTCCATAGTTCTTCTTCATCATCAC CACCCCCTCCATCTTTCTCTAACTGGAATATTCTTGATAACAATCCATGCAACTGGACCTGTATTACATGCTCCTCACTA GGCTTTGTCACTGAAATCAACATACAATCCACCCCTCTTGAGCTTCCCGTACTTTTCAATCTCTCTTCATTCCCCTTTCT TCACAAGCTTGTAATTTCTGATGCCAATCTCACTGGAACCATCCCAGTTGACATTGGTGATTGCTCTGCTCTCTATGTTA TTGACCTGAGCTCCAACAATCTTGTTGGTTCTATTCCTGCAAGCATTGGCAAACTCCAGAAACTGGAGAATTTGTCTTTG AACTCTAACCAGCTTACTGGGAAAATTCCAGATGAGATAAGCAACTGCATTAGTCTGAAAAATCTTCTCCTTTTTGATAA TCAGCTAGATGGGACTCTCCCACCTTCTCTGGGAAAGTTGTCAAAACTTGAGGCTCTCAGAGCAGGAGGAAACAAAGGTA TAGTTGGAGAAATCCCTGAAGAGCTTGGAGAATGCAGAAATTTGACTGTGTTGGGGTTGGCTGATACAAGAATATCAGGT TCTTTGCCTGCTTCTTTGGGTCAGCTTAGAAAGCTTCAAACTTTGTCAATCTATACCACTATGCTATCTAGTGAAATTCC ACCAGAGTTAGGTAATTGTTCTGAACTTGTTGACTTGTTCCTATATGAAAATAGCCTATCAGGGTCTATTCCACCTGAGC TTGGCAAGTTAAAAAAGCTGGAGCAGTTGTTTCTATGGCAGAATAGTCTTGTGGGAGCTATCCCAGAAGAGATTGGTAAC TGTTCAAGCTTGAGGAATATTGACCTCTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTGGGGGGTCTTTTAGA GCTTGAAGAGTTCATGATTAGTGATAACAATGTGTCTGGCTCTATACCATCAAGTCTCTCAAATGCTAAAAGTCTTCAAC AGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTGATTCCACCAGAGCTTGGGAAGTTGGAAAATCTATTAGTGTTCTTT GCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCAACTTTGGGAAACTGCAGCAATTTACAAGCGCTGGACTTGTCTCG CAACGCGCTCACTGGTAGCATCCCTGGTGGCCTATTTCAGCTCCAAAACCTCACAAAGCTACTTCTCATTTCCAATGACA TATCAGGTTTTATACCATCAGAAATAGGAAGCTGCAGCTCACTCATAAGTTGCAATTCACTTAGTGGAGCAATCCCAGAT CAGATATCTTCTCTCAACAAGCTTTCCATACTTGACCTTTCACATAATCAATTAGAAGGAGATTTGCAACCACTTGCTGA GCTTGATAACCTTGTCTCCCTCAATGTTTCTTATAACAAATTAAGCGGATACCTACCAGATAACAAGCTTTTCAGGCAGT TATCATCGAAAGACCTCACTGGAAATCAAGGGCTATGCAATTCAGGTGAAGACTCATGCTTTGTAAAGGATTCTGCCAAG GATGATATGAAATTGAATGGAAATGATGCAAGGAAGTCACAGAAGCTCAAAATAACCATTGGATTGCTGATAGCCTTAGC AGTGATAATGTTAGTTATGGGGGTAACTGCTGTGGTCAAAGCAAAGAGAACAATCAGAGATGATGATTCAGAATTAGGAG ACTCATGGCCTTGGCAATTCATACCATTCCAGAAGCTAAGTTTTTCAGTTGAACAAATTCTAAGATGCTTAGTTGATAGG AATATAATTGGGAAGGGATGTTCCGGTGTTGTTTATCGCGCTGAAATGGATACTGGTGAAGTCATTGCAGTGAAGAAACT ATGGCCAATAACAAATGATGCTGCAGTGGATGTTTTCAAGGAAGATAAAAGTGGAGTTCGCGATTCGTTCTCAGCTGAGG TGAAGGCCCTTGGCTCGATTCGGCACAAGAACATTGTCAGGTTCTTGGGTTGTTGTTGGAACAGGAGAACAAGGTTGCTT ATCTTTGATTACATGGCAAATGGAAGTTTAAGCAGTTTACTTCATGAGAGGAGTGGGAATTCTCTAGAATGGGAACTCAG GTACAGAATCTTGTTAGGTGCTGCAGAAGGTTTGGCTTATCTGCACCATGACTGTGTCCCTCCTATAGTCCACAGAGATA TTAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAGCTGGTTGATGAT GGTGATTTTGGTCGTTCTTCCAATACAGTTGCTGGTTCCTATGGATATATTGCTCCAGAATATGGCTACATGTTGAAGAT CACAGAGAAGAGTGACGTTTACAGCTATGGTGTGGTGTTGCTGGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCA TACCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAGGGGTATTGAAGTGCTTGATCCAAGCTTACTCTCTAGA CCAGAATCAGAAATAGAGGAAATGATGCAGGCACTGGGAATAGCCTTGTTGTGTGTGAATTCATCCCCTGATGAGAGGCC AACAATGAGAGATATAGCCGCAATGCTCAAGGAGATAAAGCATGAGAGGGAGGAATATGCAAAATTTGATGTGCTTCTAA AAGGGTCTCCTGCAAATAGAAGCTGTGGAGGTGGTGGTGGAGTTCTGGCAACATCTTCATCAGTATCAAGAAGCAACAAC ACAAGCTTCTCTGTGTCTTCTCTGCTTCATTCATCTTCAAGTGCCAACCTGAGTTTCAAATGA
Protein sequence (LotjaGi2g1v0292300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSSRQSFYTSSLSSSLLCIILLQANLLYGLAFSANHEASTLFSWLHSSSSSSPPPPSFSNWNILDNNPCNWTCITCSSL GFVTEINIQSTPLELPVLFNLSSFPFLHKLVISDANLTGTIPVDIGDCSALYVIDLSSNNLVGSIPASIGKLQKLENLSL NSNQLTGKIPDEISNCISLKNLLLFDNQLDGTLPPSLGKLSKLEALRAGGNKGIVGEIPEELGECRNLTVLGLADTRISG SLPASLGQLRKLQTLSIYTTMLSSEIPPELGNCSELVDLFLYENSLSGSIPPELGKLKKLEQLFLWQNSLVGAIPEEIGN CSSLRNIDLSLNSLSGTIPLSLGGLLELEEFMISDNNVSGSIPSSLSNAKSLQQLQVDTNQLSGLIPPELGKLENLLVFF AWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPGGLFQLQNLTKLLLISNDISGFIPSEIGSCSSLISCNSLSGAIPD QISSLNKLSILDLSHNQLEGDLQPLAELDNLVSLNVSYNKLSGYLPDNKLFRQLSSKDLTGNQGLCNSGEDSCFVKDSAK DDMKLNGNDARKSQKLKITIGLLIALAVIMLVMGVTAVVKAKRTIRDDDSELGDSWPWQFIPFQKLSFSVEQILRCLVDR NIIGKGCSGVVYRAEMDTGEVIAVKKLWPITNDAAVDVFKEDKSGVRDSFSAEVKALGSIRHKNIVRFLGCCWNRRTRLL IFDYMANGSLSSLLHERSGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDD GDFGRSSNTVAGSYGYIAPEYGYMLKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGIEVLDPSLLSR PESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANRSCGGGGGVLATSSSVSRSNN TSFSVSSLLHSSSSANLSFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| TMHMM | 13 | 35 | 23 | - | – | |
| PANTHER | 18 | 425 | 408 | 2.1E-285 | – | |
| PANTHER | 18 | 425 | 408 | 2.1E-285 | – | |
| Phobius | 24 | 30 | 7 | - | – | |
| Phobius | 31 | 577 | 547 | - | – | |
| Gene3D | 34 | 187 | 154 | 1.1E-32 | ||
| Pfam | 36 | 78 | 43 | 9.8E-5 | ||
| SUPERFAMILY | 55 | 316 | 262 | 1.21E-49 | – | |
| ProSiteProfiles | 130 | 152 | 23 | 4.963 | ||
| SMART | 152 | 176 | 25 | 14.0 | ||
| ProSiteProfiles | 154 | 176 | 23 | 6.649 | ||
| ProSiteProfiles | 178 | 200 | 23 | 4.886 | ||
| Gene3D | 188 | 290 | 103 | 7.0E-28 | ||
| ProSiteProfiles | 227 | 249 | 23 | 4.632 | ||
| SMART | 249 | 273 | 25 | 200.0 | ||
| ProSiteProfiles | 275 | 298 | 24 | 4.924 | ||
| SUPERFAMILY | 290 | 546 | 257 | 2.49E-52 | – | |
| Gene3D | 291 | 383 | 93 | 3.7E-23 | ||
| SMART | 297 | 321 | 25 | 42.0 | ||
| ProSiteProfiles | 323 | 346 | 24 | 5.309 | ||
| ProSiteProfiles | 371 | 394 | 24 | 4.77 | ||
| Gene3D | 384 | 467 | 84 | 2.0E-21 | ||
| SMART | 417 | 441 | 25 | 29.0 | ||
| ProSiteProfiles | 419 | 441 | 23 | 6.926 | ||
| PRINTS | 420 | 433 | 14 | 1.2E-5 | – | |
| ProSiteProfiles | 443 | 465 | 23 | 5.225 | ||
| Gene3D | 468 | 540 | 73 | 1.2E-12 | ||
| PANTHER | 472 | 924 | 453 | 2.1E-285 | – | |
| PANTHER | 472 | 924 | 453 | 2.1E-285 | – | |
| PRINTS | 485 | 498 | 14 | 1.2E-5 | – | |
| SMART | 485 | 504 | 20 | 360.0 | ||
| ProSiteProfiles | 487 | 509 | 23 | 7.843 | ||
| SMART | 508 | 533 | 26 | 70.0 | ||
| ProSiteProfiles | 510 | 531 | 22 | 5.81 | ||
| Phobius | 578 | 599 | 22 | - | – | |
| TMHMM | 580 | 599 | 20 | - | – | |
| Phobius | 600 | 980 | 381 | - | – | |
| SUPERFAMILY | 615 | 917 | 303 | 4.99E-73 | ||
| Gene3D | 622 | 724 | 103 | 4.1E-19 | – | |
| ProSiteProfiles | 637 | 924 | 288 | 37.616 | ||
| SMART | 637 | 920 | 284 | 1.7E-31 | ||
| Pfam | 641 | 915 | 275 | 1.1E-42 | ||
| ProSitePatterns | 643 | 666 | 24 | - | ||
| Gene3D | 725 | 934 | 210 | 2.5E-59 | – | |
| ProSitePatterns | 769 | 781 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0292300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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