Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0376100 |
| Transcript ID | LotjaGi2g1v0376100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|Q94ES0|Q94ES0_PEA AAA-metalloprotease FtsH; Found in the gene: LotjaGi2g1v0376100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87341386..87347226) extracted from Lotus japonicus Gifu genome v1.2.
GCGAGTACCGTGTTTGGCAAGACAATTTTAATGGAACGAAGCCAACGTGCCCCTTTGTTGACCTCAAGCCAAGCCTTTTA TTTGGTGCTCAAACAAAAACACCGCTACTCACTCTTTCTCACAAAACAAACCATCTCATATCATCATCTCCTTCACTTCT CTCTTCATCAATCCTCTCTGTATCGCTAAACCACGTTGCAATTCTTCAGATCTACCATTGTTCCTCACATCTTTTGATCA TGATTTTTTCTAGGATTGGACGCTCCTTGTCGCGTTCTTCTCGCGCTAGAGTAAGCTTTTTCGTTACCCATCATTTTAAT TCGCTTATTTACATCCAAAAGACTCTAACTTTGTTTCAATTGTCTTCTGGGTCGTAGAATCTTTTCTGCGGTGATGGCAG ATTGGGAACCCTAGGGGTATCGTCGCGAACGAATGTCGCGGCGGAAGGGGGATTAGGGTTTTTCAGGGGATATGCATCTT CTGTCGGAGCTGCTCGCAGTAGTGGCAGCCTCCTTTCCAATTTGGCTGCTTTCAAATCTGTTGCCGCAAACCCTAGGCTT CACCACCGCTTGTTTTCCAGCGAAGCCCCTAAGAAGAGTGAGTCAAATTGGAACTGTTTTTATTCTCTCTTTTGCTTCTG GATTACTATGCTAGTGTTCTGATTGGACTTTCTTGCTGTTTTTGGTAGATTATGAGAACTTCTATCCCAAGGAAAAGAAG GATGCTCCCAAGGGAAACGGAAACAACGATAAAAAATACGAGTCTAAAGGTACAAAAGGAATATTTGTTGTGCCTTGTGA ATAAGTCATTTGTGAATAGCTCATCTCAAATCATTTGAAAATGTTGGTTATTATATAGCTGATTAAATTTATTCAAGCTC GGGGGATAATAGTTGTTTAACTAGAGCGCGTATGTTTAGGGGTTTTGAGACATATGGTTCAATGCCAAACATATGCCATT TCATTTACATGGTGTATTTTCACCCTGCAATGATTTATTTAACTAATGTGTATTTGTGTGCGTTAATCATGTATCAATAA AAGGGGACTGCCACCAACATTTAACACTTGAATTCTCTGTTTGATTTCAGATGAGTCGAATACCAACTCAGATGAACAAG GAAATTTTCAAGAAACTTTCATGAAACAATTTCAAAATCTACTCACCCCATTGTTGGTGATGGGCCTATTTTTTTCATCC TTTTCTTTTGGTCCTCGCGAGCAGCAGCAGGTAAGCATAACTTCAAGCGAATTACCAGGACTATCTGTTCTTATTTTTTT ATTAGGATGAAGCTGGGTTGAGTTGAGAACTTGAGATTCATGAATATCTGCATTCCATAGATGGGTGCAATGGTTTAGAA TGCATAAGAAATGAACCTTGTGCTTCTTGACACATTATCCCATTGTAGTGTTCATTATTTTGATGAAGGGGGAAATGGAA ATACAAAAGAGAGTATGTTAAATTAGATTTTTGCTTTATGTAATGTATTATGATTATGATACTACATTGTCTTAAGACCT AGGGGAACTTTGGTATAACGGTTGAAGTTGTTGGAATTAGCATTTTGTAACTGTAAGTTAGCTGCCTAATTCTTAGGTTT ACAACGTTTTTGGCCCTTCCCCGGATCTTGCCATGGCTGGTGCGCTTTATTTGTCTTCATTTCCTCGAGTACTTACTCTT GGGTAACTCATGATTTCTTTCCTTCTTGCTCTTCATGTGGCTAGGAGGTCACATGTTTAAGTCATGAAATTAGCATTTCG TAACTGCAAGAAAAGGCTGCCTAATGCCTATATTAGACTTGCAACAGAGTCGGCCCTTCCCTGGATCCTGCCATGGCTCG TGCACCTCATCTGTGAGATGAGCTTTTGTTGACGGCTTTTGTTGAAGGCCCATAAAAAAGATTGCTATTAGGATATATTT GAGAGTTTTATATCCCACTGATTTCTGGTATCTGGTTCAAGTCTTAAGCTAGTTTGAGTTTTGAAAATTGCATGATATTT CTCTATATCTTTTTTTGTTCTGAGTGTGTCTTTGCCTGATAATTGGAATGTGAATCCAATCATATGCATTTTGGTTTCTT TTTCATTGTTAACTTGCCATCATCTTGCTGACCCGACCAGAGTTTGAATCTTTGCAGATTAGCTTTCAAGAGTTTAAAAA TAAGCTGTTGGAACCAGGGTTAGTAGACCATATTGTTGTCTCAAACAAATCAGTTGCTAAAATATATGTAAGGAGCTCTC CCCGTGATCAAACAGATGGTGAAATGGTCCAAGGGACCCTCCCTCCAAAGGGATCTGGAGGCCAATACAAATATTTTTTC AATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCACAAGAAGCACTGGGAATCGACTCTCATGATTATGT ACCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGATGAGATTTGCTCCAACACTGTTGCTTTTGGGATCTC TCCTATATATGGGAAGAAGAATGCAAGGTGGAATTGGTGTTGGCGGTGGCGGCGGTGGTAAGGGTGCTCGTGGAATATTC AACATAGGAAAAGCCCATGTTACTAAAGTAGACAAAAATGCCAAAAACAAGGTTAGTAGCTTTCTTATTCTTCTACAAAT GATGGTTATTGTTTTTTAAGAGCATGCTCCCTAGTTTCCATTATTGTCTTTCCCATTATAGTTTTCTCTCTAAGGAATCA TGTCTTGTGCGAATAAGTTGGTGATGAGCATTTGAGAGACTATATTTTTCATTATTTATATTCATTTGGTCAGGTCTATT TCAAAGATGTTGCTGGCTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTTAAGAACCCAAAAAAATAT GAAGAACTTGGTGCGAAAATTCCAAAAGGTGCTCTCCTGGTTGGTCCTCCAGGCACAGGAAAAACCCTTTTAGCAAAAGC AACTGCAGGAGAGTCTGCTGTACCATTTCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTTGGTGTCGGGCCAT CTAGGGTGAGAAACTTGTTTCAGGAAGCAAGACAGTGTGCTCCCAGTATAATATTTATTGATGAGATTGATGCGATTGGT CGAGCAAGGGGACGTGGAGGTTTCTCTGGAGCAAATGATGAGCGCGAAAGTACTTTAAATCAATTGTTGGTCGAGATGGA TGGTTTTGGAACCACAGCTGGAGTTGTTGTGCTGGCAGGAACAAATAGACCTGATATATTAGACAGTGCCCTACTTAGAC CTGGGCGATTTGATCGCCAGATTTCAATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCAGATATACTTGAAA AAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTGCTGGAGCCGACAT TGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGAGGTGACAAAACACAAGTCACAATGGACCATTTTGAGGCAG CTATTGATAGGATTATTGGTGGTTTGGAGAAGAAGAACAAGGTATGCCATTTTTAGTTTTTATATTATTATTTAGAAAGA TCTAGCCTATAGGAAAGGGGCAGGGTAGCTGCACATTATAGGCATAGTTGTAGCCTTCATTTTTCCCATATTACTTTCCT TTCATCATCATTGTGAGTAAAATGAAGCTTTAGCAGAGAATATAGTTTATTTATTTTAATAAATATTGTTCCACATGGTA TTGGTTACTTACGATGGAGAATGAAAATGTCCCTGAGTAGACCGTCCCTTATACCCCAGATCTTCTAGTTTATTTGTATA TCTAATTCGCAAAGATAGTTGTTCTTTGGCTGTTGTTGCATTTTAAGGCTTCATGATGATGAAGATTATATGCTACATTG AATTGAAAGTATTGAACCAAGTTTGGAGCTCTCACTTTGTATTTTTTTTTTCAGTTACTGGTTAAAAGTTTCTCTAATAA CTTGTTTCTTATCAAGGTAATAAGCAAGCTGGAAAGGCGTACTGTCGCTTACCATGAGTCAGGCCATGCTGTTGCAGGTT GGTTCTTGGAACATGCTGATCCCTTGTTGAAAGTAACTATTGTTCCTCGTGGAACTGCTGCTCTTGGATTTGCGCAGTAC GTTCCAAATGAGAACCTTCTCTTGACAAAGGAGCAGATGTTTGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGA GCAGGTTGTTTAGCATTTCCAATTTTGTTTACTTACTGTTTTTCTCTCCTTTTTTCATTAGCTCTTTGCTGTATGACTAA TGTTGATATTCTAGTGAAAGGGTGTAACATGTTTCAGACTTTTGACTAGTCTCACATTGATTAGTGATATAACTAAATAA GTCCTTATATATGGTAGAGAAATCCTCACCTCGAGCTTAGCTTTTGGGCTAGAGTTAGATCTAGCCCGAAAATCGAATAT GGCATTAGAGCCTATCCTAAATCTGTTTATTGAAGATCACCCATAAATGGGCTACGACTACCCATGGCCAGTCCTGAAAA TTTCATGCTCCAGATTTTCAGCTCGGGGGTGAGGGTGTGTTGAGGAGTCCCACATTAACTAGTGATATGACTAAATAATT ATTTATATAGATAGAGCATTTCTCATCCCTGAGCTAGTTTCTGGGGTAAACTTGGGCTTAGCCTGATTTCTAATTCAGAC ACTGTACATTACTTATTATATTTTTCAAATTCAAATCTTATTACTGCCTTGTTTTATTGTATAATGTTTTTCTCCAATTC AAATCTGAGAAAATGATTGTTTCCCTCCCTTGTTACTGCAGGTTCTCATAGGGCAAATCTCAACAGGAGCACAGAACGAC TTGGAAAAAGTGACAGACTGGAGTTATAAACAAGTGGGTGTCCTAGGTTTCAATGAGGAAGTGGGCCTCCTATCTTTCCC TCAGAAAGAAGACTCATTTGGGTCGAAGCCATATAGCAGCGAAACTGCTGCATTGATTGATAGGGAAGTGAGAAAATTGG TGAAGAAAGCATATGACCATACAGTAAATTTAATTGAGGAACACAAGGAGCAGGTAGCTCAAATTGCAGAGTTGCTGCTG GAAAAAGAAGTACTTCACCAAGATGACTTGCGTCGAGTTTTGGGTGAGCGTCCCTTCAAGGCCAGTGAACCCACCAATTA TGATACCTTTAAGCAAGGTTTCCAAGAGGACGAGACAAAAAACATAGAAAGCATGGTCGATGTGGCTGAAGAGGGTGGTG GGGATTCACCTTTTGATCCTCAGGTAGTTCCCACATAGTTGAATAAGTTCCCGTTTTGATTTATAGTGTACATGAATATC ATGTTTTTGTGAATTGATAACATGGACAAAACTTGTACGATAACTGCTAATAAATACAATTTATTTCTGATTTCTCTTTT CTTATATCCTATGTTGCAAAATAACCTATCCAAATTTTGGAACCAAAGTAGCCTCTTCATAGAATGACGAGTTTGAGTTT TCTGATTTTGTTGCTGCAACTGTCAAATGATTTTGTCTTCGGGTTTGATCGAGCCCATGGTAATGTGCACTCCATTGCAT TGCATGAACATAATCTTCCCTTCAGAGGAGCCTGGCTTGTTTGTAGGGTACCACAGGTATGAGAGAAGCAGTGGGTGCAC AAAAATGAAAGGTTCGGTATTTTTATCTAATGCTCGGTTTAGATGTATAGTGTAAACGAGAGGACAAAAATATAAAGAAA AGAGTTCAAGGTGAAATAATATAAATGAAAAGTAAAGTGATCGTTGGTTTCCTATTTTCATCTTGAACTATTGAGTATTT C
CDS sequence (LotjaGi2g1v0376100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTTTCTAGGATTGGACGCTCCTTGTCGCGTTCTTCTCGCGCTAGAAATCTTTTCTGCGGTGATGGCAGATTGGG AACCCTAGGGGTATCGTCGCGAACGAATGTCGCGGCGGAAGGGGGATTAGGGTTTTTCAGGGGATATGCATCTTCTGTCG GAGCTGCTCGCAGTAGTGGCAGCCTCCTTTCCAATTTGGCTGCTTTCAAATCTGTTGCCGCAAACCCTAGGCTTCACCAC CGCTTGTTTTCCAGCGAAGCCCCTAAGAAGAATTATGAGAACTTCTATCCCAAGGAAAAGAAGGATGCTCCCAAGGGAAA CGGAAACAACGATAAAAAATACGAGTCTAAAGATGAGTCGAATACCAACTCAGATGAACAAGGAAATTTTCAAGAAACTT TCATGAAACAATTTCAAAATCTACTCACCCCATTGTTGGTGATGGGCCTATTTTTTTCATCCTTTTCTTTTGGTCCTCGC GAGCAGCAGCAGATTAGCTTTCAAGAGTTTAAAAATAAGCTGTTGGAACCAGGGTTAGTAGACCATATTGTTGTCTCAAA CAAATCAGTTGCTAAAATATATGTAAGGAGCTCTCCCCGTGATCAAACAGATGGTGAAATGGTCCAAGGGACCCTCCCTC CAAAGGGATCTGGAGGCCAATACAAATATTTTTTCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCA CAAGAAGCACTGGGAATCGACTCTCATGATTATGTACCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGAT GAGATTTGCTCCAACACTGTTGCTTTTGGGATCTCTCCTATATATGGGAAGAAGAATGCAAGGTGGAATTGGTGTTGGCG GTGGCGGCGGTGGTAAGGGTGCTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACTAAAGTAGACAAAAATGCCAAA AACAAGGTCTATTTCAAAGATGTTGCTGGCTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTTAAGAA CCCAAAAAAATATGAAGAACTTGGTGCGAAAATTCCAAAAGGTGCTCTCCTGGTTGGTCCTCCAGGCACAGGAAAAACCC TTTTAGCAAAAGCAACTGCAGGAGAGTCTGCTGTACCATTTCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTT GGTGTCGGGCCATCTAGGGTGAGAAACTTGTTTCAGGAAGCAAGACAGTGTGCTCCCAGTATAATATTTATTGATGAGAT TGATGCGATTGGTCGAGCAAGGGGACGTGGAGGTTTCTCTGGAGCAAATGATGAGCGCGAAAGTACTTTAAATCAATTGT TGGTCGAGATGGATGGTTTTGGAACCACAGCTGGAGTTGTTGTGCTGGCAGGAACAAATAGACCTGATATATTAGACAGT GCCCTACTTAGACCTGGGCGATTTGATCGCCAGATTTCAATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCA GATATACTTGAAAAAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTG CTGGAGCCGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGAGGTGACAAAACACAAGTCACAATGGAC CATTTTGAGGCAGCTATTGATAGGATTATTGGTGGTTTGGAGAAGAAGAACAAGGTAATAAGCAAGCTGGAAAGGCGTAC TGTCGCTTACCATGAGTCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATGCTGATCCCTTGTTGAAAGTAACTATTG TTCCTCGTGGAACTGCTGCTCTTGGATTTGCGCAGTACGTTCCAAATGAGAACCTTCTCTTGACAAAGGAGCAGATGTTT GATATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTCTCATAGGGCAAATCTCAACAGGAGCACAGAACGA CTTGGAAAAAGTGACAGACTGGAGTTATAAACAAGTGGGTGTCCTAGGTTTCAATGAGGAAGTGGGCCTCCTATCTTTCC CTCAGAAAGAAGACTCATTTGGGTCGAAGCCATATAGCAGCGAAACTGCTGCATTGATTGATAGGGAAGTGAGAAAATTG GTGAAGAAAGCATATGACCATACAGTAAATTTAATTGAGGAACACAAGGAGCAGGTAGCTCAAATTGCAGAGTTGCTGCT GGAAAAAGAAGTACTTCACCAAGATGACTTGCGTCGAGTTTTGGGTGAGCGTCCCTTCAAGGCCAGTGAACCCACCAATT ATGATACCTTTAAGCAAGGTTTCCAAGAGGACGAGACAAAAAACATAGAAAGCATGGTCGATGTGGCTGAAGAGGGTGGT GGGGATTCACCTTTTGATCCTCAGGTAGTTCCCACATAG
Protein sequence (LotjaGi2g1v0376100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIFSRIGRSLSRSSRARNLFCGDGRLGTLGVSSRTNVAAEGGLGFFRGYASSVGAARSSGSLLSNLAAFKSVAANPRLHH RLFSSEAPKKNYENFYPKEKKDAPKGNGNNDKKYESKDESNTNSDEQGNFQETFMKQFQNLLTPLLVMGLFFSSFSFGPR EQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRSSPRDQTDGEMVQGTLPPKGSGGQYKYFFNIGSVESFEEKLEEA QEALGIDSHDYVPVTYSSEMVWYQELMRFAPTLLLLGSLLYMGRRMQGGIGVGGGGGGKGARGIFNIGKAHVTKVDKNAK NKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFV GVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGANDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDS ALLRPGRFDRQISIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGDKTQVTMD HFEAAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHADPLLKVTIVPRGTAALGFAQYVPNENLLLTKEQMF DMTCMTLGGRAAEQVLIGQISTGAQNDLEKVTDWSYKQVGVLGFNEEVGLLSFPQKEDSFGSKPYSSETAALIDREVRKL VKKAYDHTVNLIEEHKEQVAQIAELLLEKEVLHQDDLRRVLGERPFKASEPTNYDTFKQGFQEDETKNIESMVDVAEEGG GDSPFDPQVVPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 812 | 812 | 0.0 | – | |
| Phobius | 1 | 140 | 140 | - | – | |
| PANTHER | 1 | 812 | 812 | 0.0 | – | |
| Hamap | 12 | 786 | 775 | 32.594 | ||
| MobiDBLite | 95 | 127 | 33 | - | – | |
| MobiDBLite | 95 | 122 | 28 | - | – | |
| Phobius | 141 | 158 | 18 | - | – | |
| Pfam | 142 | 249 | 108 | 1.5E-11 | ||
| Gene3D | 149 | 261 | 113 | 1.1E-29 | – | |
| Phobius | 159 | 812 | 654 | - | – | |
| TIGRFAM | 262 | 761 | 500 | 6.4E-201 | ||
| Gene3D | 310 | 497 | 188 | 8.2E-66 | – | |
| SUPERFAMILY | 322 | 569 | 248 | 3.68E-67 | ||
| SMART | 358 | 498 | 141 | 7.0E-21 | ||
| CDD | 359 | 496 | 138 | 5.4077E-26 | – | |
| Pfam | 363 | 495 | 133 | 1.2E-40 | ||
| ProSitePatterns | 466 | 484 | 19 | - | ||
| Gene3D | 498 | 576 | 79 | 2.8E-27 | – | |
| Pfam | 525 | 564 | 40 | 9.7E-14 | ||
| Gene3D | 579 | 779 | 201 | 3.0E-66 | ||
| SUPERFAMILY | 579 | 768 | 190 | 4.97E-61 | ||
| Pfam | 579 | 760 | 182 | 1.2E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0376100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…