Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0376100 |
| Transcript ID | LotjaGi2g1v0376100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0376100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87341909..87346373) extracted from Lotus japonicus Gifu genome v1.2.
TATAGCTGATTAAATTTATTCAAGCTCGGGGGATAATAGTTGTTTAACTAGAGCGCGTATGTTTAGGGGTTTTGAGACAT ATGGTTCAATGCCAAACATATGCCATTTCATTTACATGGTGTATTTTCACCCTGCAATGATTTATTTAACTAATGTGTAT TTGTGTGCGTTAATCATGTATCAATAAAAGGGGACTGCCACCAACATTTAACACTTGAATTCTCTGTTTGATTTCAGATG AGTCGAATACCAACTCAGATGAACAAGGAAATTTTCAAGAAACTTTCATGAAACAATTTCAAAATCTACTCACCCCATTG TTGGTGATGGGCCTATTTTTTTCATCCTTTTCTTTTGGTCCTCGCGAGCAGCAGCAGGTAAGCATAACTTCAAGCGAATT ACCAGGACTATCTGTTCTTATTTTTTTATTAGGATGAAGCTGGGTTGAGTTGAGAACTTGAGATTCATGAATATCTGCAT TCCATAGATGGGTGCAATGGTTTAGAATGCATAAGAAATGAACCTTGTGCTTCTTGACACATTATCCCATTGTAGTGTTC ATTATTTTGATGAAGGGGGAAATGGAAATACAAAAGAGAGTATGTTAAATTAGATTTTTGCTTTATGTAATGTATTATGA TTATGATACTACATTGTCTTAAGACCTAGGGGAACTTTGGTATAACGGTTGAAGTTGTTGGAATTAGCATTTTGTAACTG TAAGTTAGCTGCCTAATTCTTAGGTTTACAACGTTTTTGGCCCTTCCCCGGATCTTGCCATGGCTGGTGCGCTTTATTTG TCTTCATTTCCTCGAGTACTTACTCTTGGGTAACTCATGATTTCTTTCCTTCTTGCTCTTCATGTGGCTAGGAGGTCACA TGTTTAAGTCATGAAATTAGCATTTCGTAACTGCAAGAAAAGGCTGCCTAATGCCTATATTAGACTTGCAACAGAGTCGG CCCTTCCCTGGATCCTGCCATGGCTCGTGCACCTCATCTGTGAGATGAGCTTTTGTTGACGGCTTTTGTTGAAGGCCCAT AAAAAAGATTGCTATTAGGATATATTTGAGAGTTTTATATCCCACTGATTTCTGGTATCTGGTTCAAGTCTTAAGCTAGT TTGAGTTTTGAAAATTGCATGATATTTCTCTATATCTTTTTTTGTTCTGAGTGTGTCTTTGCCTGATAATTGGAATGTGA ATCCAATCATATGCATTTTGGTTTCTTTTTCATTGTTAACTTGCCATCATCTTGCTGACCCGACCAGAGTTTGAATCTTT GCAGATTAGCTTTCAAGAGTTTAAAAATAAGCTGTTGGAACCAGGGTTAGTAGACCATATTGTTGTCTCAAACAAATCAG TTGCTAAAATATATGTAAGGAGCTCTCCCCGTGATCAAACAGATGGTGAAATGGTCCAAGGGACCCTCCCTCCAAAGGGA TCTGGAGGCCAATACAAATATTTTTTCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCACAAGAAGC ACTGGGAATCGACTCTCATGATTATGTACCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGATGAGATTTG CTCCAACACTGTTGCTTTTGGGATCTCTCCTATATATGGGAAGAAGAATGCAAGGTGGAATTGGTGTTGGCGGTGGCGGC GGTGGTAAGGGTGCTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACTAAAGTAGACAAAAATGCCAAAAACAAGGT TAGTAGCTTTCTTATTCTTCTACAAATGATGGTTATTGTTTTTTAAGAGCATGCTCCCTAGTTTCCATTATTGTCTTTCC CATTATAGTTTTCTCTCTAAGGAATCATGTCTTGTGCGAATAAGTTGGTGATGAGCATTTGAGAGACTATATTTTTCATT ATTTATATTCATTTGGTCAGGTCTATTTCAAAGATGTTGCTGGCTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTC CACTTCCTTAAGAACCCAAAAAAATATGAAGAACTTGGTGCGAAAATTCCAAAAGGTGCTCTCCTGGTTGGTCCTCCAGG CACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGAGAGTCTGCTGTACCATTTCTTTCTATATCTGGTTCTGATTTCA TGGAAATGTTTGTTGGTGTCGGGCCATCTAGGGTGAGAAACTTGTTTCAGGAAGCAAGACAGTGTGCTCCCAGTATAATA TTTATTGATGAGATTGATGCGATTGGTCGAGCAAGGGGACGTGGAGGTTTCTCTGGAGCAAATGATGAGCGCGAAAGTAC TTTAAATCAATTGTTGGTCGAGATGGATGGTTTTGGAACCACAGCTGGAGTTGTTGTGCTGGCAGGAACAAATAGACCTG ATATATTAGACAGTGCCCTACTTAGACCTGGGCGATTTGATCGCCAGATTTCAATTGATAAACCTGATATTAAAGGTCGT GACCAGATATTTCAGATATACTTGAAAAAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCT TACTCCAGGATTTGCTGGAGCCGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGAGGTGACAAAACAC AAGTCACAATGGACCATTTTGAGGCAGCTATTGATAGGATTATTGGTGGTTTGGAGAAGAAGAACAAGGTATGCCATTTT TAGTTTTTATATTATTATTTAGAAAGATCTAGCCTATAGGAAAGGGGCAGGGTAGCTGCACATTATAGGCATAGTTGTAG CCTTCATTTTTCCCATATTACTTTCCTTTCATCATCATTGTGAGTAAAATGAAGCTTTAGCAGAGAATATAGTTTATTTA TTTTAATAAATATTGTTCCACATGGTATTGGTTACTTACGATGGAGAATGAAAATGTCCCTGAGTAGACCGTCCCTTATA CCCCAGATCTTCTAGTTTATTTGTATATCTAATTCGCAAAGATAGTTGTTCTTTGGCTGTTGTTGCATTTTAAGGCTTCA TGATGATGAAGATTATATGCTACATTGAATTGAAAGTATTGAACCAAGTTTGGAGCTCTCACTTTGTATTTTTTTTTTCA GTTACTGGTTAAAAGTTTCTCTAATAACTTGTTTCTTATCAAGGTAATAAGCAAGCTGGAAAGGCGTACTGTCGCTTACC ATGAGTCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATGCTGATCCCTTGTTGAAAGTAACTATTGTTCCTCGTGGA ACTGCTGCTCTTGGATTTGCGCAGTACGTTCCAAATGAGAACCTTCTCTTGACAAAGGAGCAGATGTTTGATATGACTTG TATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTGTTTAGCATTTCCAATTTTGTTTACTTACTGTTTTTCTCTCCTTTT TTCATTAGCTCTTTGCTGTATGACTAATGTTGATATTCTAGTGAAAGGGTGTAACATGTTTCAGACTTTTGACTAGTCTC ACATTGATTAGTGATATAACTAAATAAGTCCTTATATATGGTAGAGAAATCCTCACCTCGAGCTTAGCTTTTGGGCTAGA GTTAGATCTAGCCCGAAAATCGAATATGGCATTAGAGCCTATCCTAAATCTGTTTATTGAAGATCACCCATAAATGGGCT ACGACTACCCATGGCCAGTCCTGAAAATTTCATGCTCCAGATTTTCAGCTCGGGGGTGAGGGTGTGTTGAGGAGTCCCAC ATTAACTAGTGATATGACTAAATAATTATTTATATAGATAGAGCATTTCTCATCCCTGAGCTAGTTTCTGGGGTAAACTT GGGCTTAGCCTGATTTCTAATTCAGACACTGTACATTACTTATTATATTTTTCAAATTCAAATCTTATTACTGCCTTGTT TTATTGTATAATGTTTTTCTCCAATTCAAATCTGAGAAAATGATTGTTTCCCTCCCTTGTTACTGCAGGTTCTCATAGGG CAAATCTCAACAGGAGCACAGAACGACTTGGAAAAAGTGACAGACTGGAGTTATAAACAAGTGGGTGTCCTAGGTTTCAA TGAGGAAGTGGGCCTCCTATCTTTCCCTCAGAAAGAAGACTCATTTGGGTCGAAGCCATATAGCAGCGAAACTGCTGCAT TGATTGATAGGGAAGTGAGAAAATTGGTGAAGAAAGCATATGACCATACAGTAAATTTAATTGAGGAACACAAGGAGCAG GTAGCTCAAATTGCAGAGTTGCTGCTGGAAAAAGAAGTACTTCACCAAGATGACTTGCGTCGAGTTTTGGGTGAGCGTCC CTTCAAGGCCAGTGAACCCACCAATTATGATACCTTTAAGCAAGGTTTCCAAGAGGACGAGACAAAAAACATAGAAAGCA TGGTCGATGTGGCTGAAGAGGGTGGTGGGGATTCACCTTTTGATCCTCAGGTAGTTCCCACATAG
CDS sequence (LotjaGi2g1v0376100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACAATTTCAAAATCTACTCACCCCATTGTTGGTGATGGGCCTATTTTTTTCATCCTTTTCTTTTGGTCCTCGCGA GCAGCAGCAGATTAGCTTTCAAGAGTTTAAAAATAAGCTGTTGGAACCAGGGTTAGTAGACCATATTGTTGTCTCAAACA AATCAGTTGCTAAAATATATGTAAGGAGCTCTCCCCGTGATCAAACAGATGGTGAAATGGTCCAAGGGACCCTCCCTCCA AAGGGATCTGGAGGCCAATACAAATATTTTTTCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCACA AGAAGCACTGGGAATCGACTCTCATGATTATGTACCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGATGA GATTTGCTCCAACACTGTTGCTTTTGGGATCTCTCCTATATATGGGAAGAAGAATGCAAGGTGGAATTGGTGTTGGCGGT GGCGGCGGTGGTAAGGGTGCTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACTAAAGTAGACAAAAATGCCAAAAA CAAGGTCTATTTCAAAGATGTTGCTGGCTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTTAAGAACC CAAAAAAATATGAAGAACTTGGTGCGAAAATTCCAAAAGGTGCTCTCCTGGTTGGTCCTCCAGGCACAGGAAAAACCCTT TTAGCAAAAGCAACTGCAGGAGAGTCTGCTGTACCATTTCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTTGG TGTCGGGCCATCTAGGGTGAGAAACTTGTTTCAGGAAGCAAGACAGTGTGCTCCCAGTATAATATTTATTGATGAGATTG ATGCGATTGGTCGAGCAAGGGGACGTGGAGGTTTCTCTGGAGCAAATGATGAGCGCGAAAGTACTTTAAATCAATTGTTG GTCGAGATGGATGGTTTTGGAACCACAGCTGGAGTTGTTGTGCTGGCAGGAACAAATAGACCTGATATATTAGACAGTGC CCTACTTAGACCTGGGCGATTTGATCGCCAGATTTCAATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCAGA TATACTTGAAAAAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTGCT GGAGCCGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGAGGTGACAAAACACAAGTCACAATGGACCA TTTTGAGGCAGCTATTGATAGGATTATTGGTGGTTTGGAGAAGAAGAACAAGGTAATAAGCAAGCTGGAAAGGCGTACTG TCGCTTACCATGAGTCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATGCTGATCCCTTGTTGAAAGTAACTATTGTT CCTCGTGGAACTGCTGCTCTTGGATTTGCGCAGTACGTTCCAAATGAGAACCTTCTCTTGACAAAGGAGCAGATGTTTGA TATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTCTCATAGGGCAAATCTCAACAGGAGCACAGAACGACT TGGAAAAAGTGACAGACTGGAGTTATAAACAAGTGGGTGTCCTAGGTTTCAATGAGGAAGTGGGCCTCCTATCTTTCCCT CAGAAAGAAGACTCATTTGGGTCGAAGCCATATAGCAGCGAAACTGCTGCATTGATTGATAGGGAAGTGAGAAAATTGGT GAAGAAAGCATATGACCATACAGTAAATTTAATTGAGGAACACAAGGAGCAGGTAGCTCAAATTGCAGAGTTGCTGCTGG AAAAAGAAGTACTTCACCAAGATGACTTGCGTCGAGTTTTGGGTGAGCGTCCCTTCAAGGCCAGTGAACCCACCAATTAT GATACCTTTAAGCAAGGTTTCCAAGAGGACGAGACAAAAAACATAGAAAGCATGGTCGATGTGGCTGAAGAGGGTGGTGG GGATTCACCTTTTGATCCTCAGGTAGTTCCCACATAG
Protein sequence (LotjaGi2g1v0376100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKQFQNLLTPLLVMGLFFSSFSFGPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRSSPRDQTDGEMVQGTLPP KGSGGQYKYFFNIGSVESFEEKLEEAQEALGIDSHDYVPVTYSSEMVWYQELMRFAPTLLLLGSLLYMGRRMQGGIGVGG GGGGKGARGIFNIGKAHVTKVDKNAKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL LAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGANDERESTLNQLL VEMDGFGTTAGVVVLAGTNRPDILDSALLRPGRFDRQISIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFA GADIANVCNEAALIAARGDKTQVTMDHFEAAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHADPLLKVTIV PRGTAALGFAQYVPNENLLLTKEQMFDMTCMTLGGRAAEQVLIGQISTGAQNDLEKVTDWSYKQVGVLGFNEEVGLLSFP QKEDSFGSKPYSSETAALIDREVRKLVKKAYDHTVNLIEEHKEQVAQIAELLLEKEVLHQDDLRRVLGERPFKASEPTNY DTFKQGFQEDETKNIESMVDVAEEGGGDSPFDPQVVPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PANTHER | 2 | 678 | 677 | 0.0 | – | |
| PANTHER | 2 | 678 | 677 | 0.0 | – | |
| Hamap | 2 | 652 | 651 | 32.516 | ||
| Phobius | 7 | 18 | 12 | - | – | |
| Pfam | 8 | 115 | 108 | 1.1E-11 | ||
| Gene3D | 15 | 127 | 113 | 8.2E-30 | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 678 | 656 | - | – | |
| TIGRFAM | 128 | 627 | 500 | 3.7E-201 | ||
| Gene3D | 176 | 363 | 188 | 6.0E-66 | – | |
| SUPERFAMILY | 188 | 435 | 248 | 2.53E-67 | ||
| SMART | 224 | 364 | 141 | 7.0E-21 | ||
| CDD | 225 | 362 | 138 | 1.03512E-25 | – | |
| Pfam | 229 | 361 | 133 | 8.8E-41 | ||
| ProSitePatterns | 332 | 350 | 19 | - | ||
| Gene3D | 364 | 442 | 79 | 2.2E-27 | – | |
| Pfam | 391 | 430 | 40 | 7.8E-14 | ||
| Gene3D | 445 | 645 | 201 | 2.2E-66 | ||
| SUPERFAMILY | 445 | 634 | 190 | 3.66E-61 | ||
| Pfam | 445 | 626 | 182 | 9.1E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0376100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…