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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0376100 |
| Transcript ID | LotjaGi2g1v0376100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0376100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87341909..87346405) extracted from Lotus japonicus Gifu genome v1.2.
CATCTCAAATCATTTGAAAATGTTGGTTATTATATAGCTGATTAAATTTATTCAAGCTCGGGGGATAATAGTTGTTTAAC TAGAGCGCGTATGTTTAGGGGTTTTGAGACATATGGTTCAATGCCAAACATATGCCATTTCATTTACATGGTGTATTTTC ACCCTGCAATGATTTATTTAACTAATGTGTATTTGTGTGCGTTAATCATGTATCAATAAAAGGGGACTGCCACCAACATT TAACACTTGAATTCTCTGTTTGATTTCAGATGAGTCGAATACCAACTCAGATGAACAAGGAAATTTTCAAGAAACTTTCA TGAAACAATTTCAAAATCTACTCACCCCATTGTTGGTGATGGGCCTATTTTTTTCATCCTTTTCTTTTGGTCCTCGCGAG CAGCAGCAGGTAAGCATAACTTCAAGCGAATTACCAGGACTATCTGTTCTTATTTTTTTATTAGGATGAAGCTGGGTTGA GTTGAGAACTTGAGATTCATGAATATCTGCATTCCATAGATGGGTGCAATGGTTTAGAATGCATAAGAAATGAACCTTGT GCTTCTTGACACATTATCCCATTGTAGTGTTCATTATTTTGATGAAGGGGGAAATGGAAATACAAAAGAGAGTATGTTAA ATTAGATTTTTGCTTTATGTAATGTATTATGATTATGATACTACATTGTCTTAAGACCTAGGGGAACTTTGGTATAACGG TTGAAGTTGTTGGAATTAGCATTTTGTAACTGTAAGTTAGCTGCCTAATTCTTAGGTTTACAACGTTTTTGGCCCTTCCC CGGATCTTGCCATGGCTGGTGCGCTTTATTTGTCTTCATTTCCTCGAGTACTTACTCTTGGGTAACTCATGATTTCTTTC CTTCTTGCTCTTCATGTGGCTAGGAGGTCACATGTTTAAGTCATGAAATTAGCATTTCGTAACTGCAAGAAAAGGCTGCC TAATGCCTATATTAGACTTGCAACAGAGTCGGCCCTTCCCTGGATCCTGCCATGGCTCGTGCACCTCATCTGTGAGATGA GCTTTTGTTGACGGCTTTTGTTGAAGGCCCATAAAAAAGATTGCTATTAGGATATATTTGAGAGTTTTATATCCCACTGA TTTCTGGTATCTGGTTCAAGTCTTAAGCTAGTTTGAGTTTTGAAAATTGCATGATATTTCTCTATATCTTTTTTTGTTCT GAGTGTGTCTTTGCCTGATAATTGGAATGTGAATCCAATCATATGCATTTTGGTTTCTTTTTCATTGTTAACTTGCCATC ATCTTGCTGACCCGACCAGAGTTTGAATCTTTGCAGATTAGCTTTCAAGAGTTTAAAAATAAGCTGTTGGAACCAGGGTT AGTAGACCATATTGTTGTCTCAAACAAATCAGTTGCTAAAATATATGTAAGGAGCTCTCCCCGTGATCAAACAGATGGTG AAATGGTCCAAGGGACCCTCCCTCCAAAGGGATCTGGAGGCCAATACAAATATTTTTTCAATATTGGAAGTGTTGAGTCT TTTGAGGAGAAGTTAGAGGAAGCACAAGAAGCACTGGGAATCGACTCTCATGATTATGTACCTGTTACATATTCTTCTGA AATGGTTTGGTACCAGGAATTGATGAGATTTGCTCCAACACTGTTGCTTTTGGGATCTCTCCTATATATGGGAAGAAGAA TGCAAGGTGGAATTGGTGTTGGCGGTGGCGGCGGTGGTAAGGGTGCTCGTGGAATATTCAACATAGGAAAAGCCCATGTT ACTAAAGTAGACAAAAATGCCAAAAACAAGGTTAGTAGCTTTCTTATTCTTCTACAAATGATGGTTATTGTTTTTTAAGA GCATGCTCCCTAGTTTCCATTATTGTCTTTCCCATTATAGTTTTCTCTCTAAGGAATCATGTCTTGTGCGAATAAGTTGG TGATGAGCATTTGAGAGACTATATTTTTCATTATTTATATTCATTTGGTCAGGTCTATTTCAAAGATGTTGCTGGCTGTG ATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTTAAGAACCCAAAAAAATATGAAGAACTTGGTGCGAAAATT CCAAAAGGTGCTCTCCTGGTTGGTCCTCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTGCAGGAGAGTCTGCTGT ACCATTTCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTTGGTGTCGGGCCATCTAGGGTGAGAAACTTGTTTC AGGAAGCAAGACAGTGTGCTCCCAGTATAATATTTATTGATGAGATTGATGCGATTGGTCGAGCAAGGGGACGTGGAGGT TTCTCTGGAGCAAATGATGAGCGCGAAAGTACTTTAAATCAATTGTTGGTCGAGATGGATGGTTTTGGAACCACAGCTGG AGTTGTTGTGCTGGCAGGAACAAATAGACCTGATATATTAGACAGTGCCCTACTTAGACCTGGGCGATTTGATCGCCAGA TTTCAATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCAGATATACTTGAAAAAGATTAAACTTGACCATGAG CCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTGCTGGAGCCGACATTGCTAATGTTTGCAATGAAGC TGCTCTGATTGCTGCAAGAGGTGACAAAACACAAGTCACAATGGACCATTTTGAGGCAGCTATTGATAGGATTATTGGTG GTTTGGAGAAGAAGAACAAGGTATGCCATTTTTAGTTTTTATATTATTATTTAGAAAGATCTAGCCTATAGGAAAGGGGC AGGGTAGCTGCACATTATAGGCATAGTTGTAGCCTTCATTTTTCCCATATTACTTTCCTTTCATCATCATTGTGAGTAAA ATGAAGCTTTAGCAGAGAATATAGTTTATTTATTTTAATAAATATTGTTCCACATGGTATTGGTTACTTACGATGGAGAA TGAAAATGTCCCTGAGTAGACCGTCCCTTATACCCCAGATCTTCTAGTTTATTTGTATATCTAATTCGCAAAGATAGTTG TTCTTTGGCTGTTGTTGCATTTTAAGGCTTCATGATGATGAAGATTATATGCTACATTGAATTGAAAGTATTGAACCAAG TTTGGAGCTCTCACTTTGTATTTTTTTTTTCAGTTACTGGTTAAAAGTTTCTCTAATAACTTGTTTCTTATCAAGGTAAT AAGCAAGCTGGAAAGGCGTACTGTCGCTTACCATGAGTCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATGCTGATC CCTTGTTGAAAGTAACTATTGTTCCTCGTGGAACTGCTGCTCTTGGATTTGCGCAGTACGTTCCAAATGAGAACCTTCTC TTGACAAAGGAGCAGATGTTTGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTGTTTAGCATTTCCA ATTTTGTTTACTTACTGTTTTTCTCTCCTTTTTTCATTAGCTCTTTGCTGTATGACTAATGTTGATATTCTAGTGAAAGG GTGTAACATGTTTCAGACTTTTGACTAGTCTCACATTGATTAGTGATATAACTAAATAAGTCCTTATATATGGTAGAGAA ATCCTCACCTCGAGCTTAGCTTTTGGGCTAGAGTTAGATCTAGCCCGAAAATCGAATATGGCATTAGAGCCTATCCTAAA TCTGTTTATTGAAGATCACCCATAAATGGGCTACGACTACCCATGGCCAGTCCTGAAAATTTCATGCTCCAGATTTTCAG CTCGGGGGTGAGGGTGTGTTGAGGAGTCCCACATTAACTAGTGATATGACTAAATAATTATTTATATAGATAGAGCATTT CTCATCCCTGAGCTAGTTTCTGGGGTAAACTTGGGCTTAGCCTGATTTCTAATTCAGACACTGTACATTACTTATTATAT TTTTCAAATTCAAATCTTATTACTGCCTTGTTTTATTGTATAATGTTTTTCTCCAATTCAAATCTGAGAAAATGATTGTT TCCCTCCCTTGTTACTGCAGGTTCTCATAGGGCAAATCTCAACAGGAGCACAGAACGACTTGGAAAAAGTGACAGACTGG AGTTATAAACAAGTGGGTGTCCTAGGTTTCAATGAGGAAGTGGGCCTCCTATCTTTCCCTCAGAAAGAAGACTCATTTGG GTCGAAGCCATATAGCAGCGAAACTGCTGCATTGATTGATAGGGAAGTGAGAAAATTGGTGAAGAAAGCATATGACCATA CAGTAAATTTAATTGAGGAACACAAGGAGCAGGTAGCTCAAATTGCAGAGTTGCTGCTGGAAAAAGAAGTACTTCACCAA GATGACTTGCGTCGAGTTTTGGGTGAGCGTCCCTTCAAGGCCAGTGAACCCACCAATTATGATACCTTTAAGCAAGGTTT CCAAGAGGACGAGACAAAAAACATAGAAAGCATGGTCGATGTGGCTGAAGAGGGTGGTGGGGATTCACCTTTTGATCCTC AGGTAGTTCCCACATAG
CDS sequence (LotjaGi2g1v0376100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACAATTTCAAAATCTACTCACCCCATTGTTGGTGATGGGCCTATTTTTTTCATCCTTTTCTTTTGGTCCTCGCGA GCAGCAGCAGATTAGCTTTCAAGAGTTTAAAAATAAGCTGTTGGAACCAGGGTTAGTAGACCATATTGTTGTCTCAAACA AATCAGTTGCTAAAATATATGTAAGGAGCTCTCCCCGTGATCAAACAGATGGTGAAATGGTCCAAGGGACCCTCCCTCCA AAGGGATCTGGAGGCCAATACAAATATTTTTTCAATATTGGAAGTGTTGAGTCTTTTGAGGAGAAGTTAGAGGAAGCACA AGAAGCACTGGGAATCGACTCTCATGATTATGTACCTGTTACATATTCTTCTGAAATGGTTTGGTACCAGGAATTGATGA GATTTGCTCCAACACTGTTGCTTTTGGGATCTCTCCTATATATGGGAAGAAGAATGCAAGGTGGAATTGGTGTTGGCGGT GGCGGCGGTGGTAAGGGTGCTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACTAAAGTAGACAAAAATGCCAAAAA CAAGGTCTATTTCAAAGATGTTGCTGGCTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTTAAGAACC CAAAAAAATATGAAGAACTTGGTGCGAAAATTCCAAAAGGTGCTCTCCTGGTTGGTCCTCCAGGCACAGGAAAAACCCTT TTAGCAAAAGCAACTGCAGGAGAGTCTGCTGTACCATTTCTTTCTATATCTGGTTCTGATTTCATGGAAATGTTTGTTGG TGTCGGGCCATCTAGGGTGAGAAACTTGTTTCAGGAAGCAAGACAGTGTGCTCCCAGTATAATATTTATTGATGAGATTG ATGCGATTGGTCGAGCAAGGGGACGTGGAGGTTTCTCTGGAGCAAATGATGAGCGCGAAAGTACTTTAAATCAATTGTTG GTCGAGATGGATGGTTTTGGAACCACAGCTGGAGTTGTTGTGCTGGCAGGAACAAATAGACCTGATATATTAGACAGTGC CCTACTTAGACCTGGGCGATTTGATCGCCAGATTTCAATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCAGA TATACTTGAAAAAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTGCT GGAGCCGACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGAGGTGACAAAACACAAGTCACAATGGACCA TTTTGAGGCAGCTATTGATAGGATTATTGGTGGTTTGGAGAAGAAGAACAAGGTAATAAGCAAGCTGGAAAGGCGTACTG TCGCTTACCATGAGTCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATGCTGATCCCTTGTTGAAAGTAACTATTGTT CCTCGTGGAACTGCTGCTCTTGGATTTGCGCAGTACGTTCCAAATGAGAACCTTCTCTTGACAAAGGAGCAGATGTTTGA TATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTCTCATAGGGCAAATCTCAACAGGAGCACAGAACGACT TGGAAAAAGTGACAGACTGGAGTTATAAACAAGTGGGTGTCCTAGGTTTCAATGAGGAAGTGGGCCTCCTATCTTTCCCT CAGAAAGAAGACTCATTTGGGTCGAAGCCATATAGCAGCGAAACTGCTGCATTGATTGATAGGGAAGTGAGAAAATTGGT GAAGAAAGCATATGACCATACAGTAAATTTAATTGAGGAACACAAGGAGCAGGTAGCTCAAATTGCAGAGTTGCTGCTGG AAAAAGAAGTACTTCACCAAGATGACTTGCGTCGAGTTTTGGGTGAGCGTCCCTTCAAGGCCAGTGAACCCACCAATTAT GATACCTTTAAGCAAGGTTTCCAAGAGGACGAGACAAAAAACATAGAAAGCATGGTCGATGTGGCTGAAGAGGGTGGTGG GGATTCACCTTTTGATCCTCAGGTAGTTCCCACATAG
Protein sequence (LotjaGi2g1v0376100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKQFQNLLTPLLVMGLFFSSFSFGPREQQQISFQEFKNKLLEPGLVDHIVVSNKSVAKIYVRSSPRDQTDGEMVQGTLPP KGSGGQYKYFFNIGSVESFEEKLEEAQEALGIDSHDYVPVTYSSEMVWYQELMRFAPTLLLLGSLLYMGRRMQGGIGVGG GGGGKGARGIFNIGKAHVTKVDKNAKNKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTL LAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGANDERESTLNQLL VEMDGFGTTAGVVVLAGTNRPDILDSALLRPGRFDRQISIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFA GADIANVCNEAALIAARGDKTQVTMDHFEAAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHADPLLKVTIV PRGTAALGFAQYVPNENLLLTKEQMFDMTCMTLGGRAAEQVLIGQISTGAQNDLEKVTDWSYKQVGVLGFNEEVGLLSFP QKEDSFGSKPYSSETAALIDREVRKLVKKAYDHTVNLIEEHKEQVAQIAELLLEKEVLHQDDLRRVLGERPFKASEPTNY DTFKQGFQEDETKNIESMVDVAEEGGGDSPFDPQVVPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PANTHER | 2 | 678 | 677 | 0.0 | – | |
| PANTHER | 2 | 678 | 677 | 0.0 | – | |
| Hamap | 2 | 652 | 651 | 32.516 | ||
| Phobius | 7 | 18 | 12 | - | – | |
| Pfam | 8 | 115 | 108 | 1.1E-11 | ||
| Gene3D | 15 | 127 | 113 | 8.2E-30 | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 678 | 656 | - | – | |
| TIGRFAM | 128 | 627 | 500 | 3.7E-201 | ||
| Gene3D | 176 | 363 | 188 | 6.0E-66 | – | |
| SUPERFAMILY | 188 | 435 | 248 | 2.53E-67 | ||
| SMART | 224 | 364 | 141 | 7.0E-21 | ||
| CDD | 225 | 362 | 138 | 1.03512E-25 | – | |
| Pfam | 229 | 361 | 133 | 8.8E-41 | ||
| ProSitePatterns | 332 | 350 | 19 | - | ||
| Gene3D | 364 | 442 | 79 | 2.2E-27 | – | |
| Pfam | 391 | 430 | 40 | 7.8E-14 | ||
| Gene3D | 445 | 645 | 201 | 2.2E-66 | ||
| SUPERFAMILY | 445 | 634 | 190 | 3.66E-61 | ||
| Pfam | 445 | 626 | 182 | 9.1E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0376100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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