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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0007800 |
| Transcript ID | LotjaGi3g1v0007800.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Signal recognition particle 54 kDa protein; TAIR: AT1G48900.1 Signal recognition particle, SRP54 subunit protein; Swiss-Prot: sp|P49972|SR542_SOLLC Signal recognition particle 54 kDa protein 2; TrEMBL-Plants: tr|A0A061G8Z1|A0A061G8Z1_THECC Signal recognition particle, SRP54 subunit protein; Found in the gene: LotjaGi3g1v0007800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:894455..903932) extracted from Lotus japonicus Gifu genome v1.2.
ATACATACTTCACAAAACCTTCCCTGCCATTCACGCCACCACTTCCCAGCATCCTTCCTCCTTCACCGGTCATCTTCCTT TCATTCAACTTCCTCCGTTCATCGCCGCTCGCCTAAGGAGTTAAAGGTGAGATCTTTTCACACTTGTTCCTGTTTTCATT GTCAAAAATCAAAATAGTATTGTTTGTTCTTCATTGTTATGAGTGTACTCTTTAGTTTTCTAGCCCCTTATTTTTTTAGT ATTATATTTTTGCACCCCTTGTTGAGTGCTGCTTTTACATTGTTGTTCTCTCTGTTTATTGTTTCTTCATTAAGACTGTT TTGTTCTTCCTTGAATGTTTGTTTGAAATCATGTTAGAAATTAGTGCTGCTTCTAGTCAAGTTGAACAAGAGGATTGATA TAGATAAATAAGCGGGGTCTTAGTGTCATACTTTTTTGATTTTAGTCATGTTGTGATGTTGTGTCTGGTGTCTGTGCTTC ATAGTTTATAGGGCTTCCCCTTTGTCTTCACCTTGTATTGTGGTTTCGGTACCCTAATCCGGTGATTGATTTGTGGAATC AGGCAAGGCAAGATGGTTCTAGCGCAGTTAGGGGGGAGCATTTCGCGTGCTCTCCAGCAGATGAGCAATGCCACGGTGAT CGACGAGAAGGTCCTCAACGAATGCCTCAAGGAGATCACTCGAGCTCTTCTTCAATCCGATGTTCAATTCAAGCTCGTCG CCGACATGCAGACCAACATCAAGAAGATTGTCAACCTTGACCATCTCGCCGCCGGTCACGACAAACGCAAGATCATCCAA CAAGTACAACAATCTTTTCTTATTTTATTGTAAATAAATAAATGGTTATGTGTATTATTGCTTATGCTTGTTTGCTTTTC ATTGATTCTATTTCTAGGCTGTGTTTAATGAGCTCTGCAAAATGCTGGATCCTGGGAAGCCCTCTTTCGCTCCCAAGAAA GGAAATACAAGTGTGGTCATGTTCGTTGGTTTACAAGGTCTGTTGCCTGTTAATTAAGCTTACTTCTGATTCCTTATCGT ATGTTTTTAATGATTTTATTCAACTGACACAACTAAGTGACACTCGCAGACATAATTTTGTATTCTGCACTTGTACATTG TTCTGAGCAATGTGTGGCATTTCTCAGATTTTACTTTCTCAGATTTCTCATAATTCTTTTCCATGTTTTTGAATAATTCA AAGGTTCACAAGTATTGTGATATATGATAATTTTTTGTTAAAATAAATTCAGGTTCTGGAAAAACTACAACCTGTACAAA ATATGCACATTATCATCAGAAGAAAGGATGGAAGCCAGCTCTAGTTTGTGCAGATACATTCAGAGCTGGTGCATTTGATC AATTGAAGCAAAATGCCGCTAAAGCTAAGATCCCTTTCTACGGAAGGTAAGGTTCTCGTTGATATTTGTTAATAGGTTAG TGTTGCAGTTGTATCATGCATGCAATTTTGAAATATGGTACTTACTCATTGAAGAGGAGTGACATAGTGGAGATAGATGA CTATGCTGTCTATTAATGTTCTTTTGGTTAGTCCATGCCCTCTGATTACAAATCGTAATTTTTAAGTTGATTCTGAAACT ATGAGAGGAACAATCTTCCTTGAGATACAATCTGAAGAGTTTCTTCTAGGAGAATGGCCTGTAGTTGTTATGGGAGATTG TACTTGCTTTCCTGAAGATCATATACTGTACAATGTTATGCTGTCTCAGAATCAAGGTTGTCAAACTCGATAGTTTAGAT AAACTCGTGGAGTGCCTGCAAACTCGACTCATGAACTCTTAAATCATGCAAAAATAATCATTAAAAACAATATTAATGAT GAAAAACTCAACAGCAAAGCTTTAAACATGCTTAAATAGCCAAATCATGCAATGGCAATTATATGAGCAAGTTTAAATCA TGTTTTAATGACCAAAACATAAATAAAATTATATCCTATCTTGTGCACTCTTGAAATCCCACCTCCAATTTACCTTTTTG GATTCTAATTTCTAAAAAAAGTAATAACCTTTGATATTATTTTTTCCTTCTTTCATGTTTTCTGTTGGAGGATGTTAAAA AGAGAGAACTATCAGAGAGAGAGATATTAAGAGAGAAATCAGAAATGATAGAATTGTGTATTTTCCTTTAACTGAATTGT AAACTAAGAAGCTCTCTTTATATAGAGCTGATGAGGTAGCTTACCCAGCAAGCTATTACCAATATACAATTTTCACTAAC AGTCTGCTAACAAACTAACTTCCTCTAAAGGGCCAGATCTAATACAACTGAGCGCACATGAGTATAGTACTCATGTTCTC GAATAGAGGAAAAAAAATAATACTTAGGGAAAAATGTAAAAGCTAGGAAAAAGGAAATTGTTGGCTCATTATAAATATGC TGGTAATGTGGAAGATATCATACTACTAACATAAAGCAAACTTAGCCTTTTTTTCTTCTCCCAATGGATTTTTGTTCAGC CTTAGGATTTCACATTTTTCTTTTTCCTTTATTTTCTGAAAGCGGGTATCCACACTCAACCATTTTTCTTCTTGGTATAA GTCCTTGCAATTGAGTTATGGTATGTTGTGCTTAATATCATTTGTTTATGGAACCTTTAATACCCGTTGCATTACATTGT CTTTCATTTCAATGCTTAAGTAATTGGTTCATTGCTCTGGTTCCATTCTTCTACAGCTATATGGAGTCAGATCCTGTGAA AATTGCTGTGGAAGGTGTGGAGAGATTCAAGAAAGAAAACTGTGATCTTATAATTGTTGATACAAGTGGGCGGCACAAAC AAGAAGCTGCTCTTTTTGAAGAAATGCGCCAAATTTCGGAAGCAACGGTATTTCCTGTTTAAGCTATATGCATTTGACAT CTATTTCCAAAAACCAATGAATTCTAATATAGTAATATCTTTTCTTCGTATTGCTCAGAACCCAGATCTTGTTATATTTG TTATGGATAGCAGTATTGGCCAGGCTGCTTTTGATCAGGCCCAAGCATTTAAACAGAGTGTCGCAGTTGGAGCTGTAATT GTTACCAAAATGGATGGCCATGCCAAGGGTGGTGGTGCTCTTAGCGCGTAAGTGTTACTTTCAGAATAATTGTTTCATGT TTACTATCAATTTTGCAGCCATAAACAAATGAAATTAGCAACAACTAATAACAAATTCTAGTCTAGCAATCATACATGCA TGGGCATTGCAATTTATTTTACCTCAATTTGAACCATCCTCGTGGTTTGAATTCTACATTAATGCCGAAATTATATATAC ACCATTTGAAGGATTTCGAAAATTAGTTTTATATGCCTTTAAAATAAATGTTTGTTATATACTTTTGTGTATATATAATG TTTGTATATGCATATGTGGTTTGGATACATTAGTCTTATTAATCTTATACGTGCAGTGTTGCAGCAACAAAGAGTCCTGT CATATTCATTGGAACTGGAGAACATATGGATGAGGTTGAAGTTTTTGATGTTAAGCCGTTCGTTAGTCGTCTATTAGGTG CATATTTCTTCATTTCTTTTTTCTTTTCACCCAATACATTATAATTTTAAGGACATCCTATGTATGTCCAAGGTCATATT ATTTAATCATATTAAACTGATTTTGAACTAGGCATGGGTGACTTGTCTGGGCTTATGGACAAAATTCATGGAGTTGTTCC TAGGGATCAACAGCCTGAACTGCTTGAGAAGCTGTCAGAAGGACACTTCACATTGAGGATGATGTATGAGCAGTTTCAGA ACATACTTAAAATGGGTCCTCTAAACCAGGTTATTACCTTATTATGTTTTATTCATTTGTTTTACCCCCTTAATATTTGA TGTTAAAGAGGAGCATTGGCGCAACGGTAAAGAGTCGGTGCCATGTGACTGAGGTCACGGGTTCAATTCCATGTGGTTGA ACCCTTCCCCGGACCACATGCGTAGCTGGAGCTTTATTGCACCGGGCTGCCCTTGATATTTAATGTACCATAATACTTAT GAGTACTTACTTGACTGTTTCTATATAATCACCTAATAATGGCTTCCGTTGTGCTAATTTCTTAGTTGGTTTATGTAGGT GTTTTCTATGCTTCCAGGATTTAGTGCTGAACTAATGCCCAAAGGCAGTGAGAAAGAAGGCCAGGCAAAAATTAAGCGTT ACATGACAATGATGGATTCAATGACAAACAAAGGCAAGCATTGTGATTTGATTGTCACAAAGATCAGCTTCATGTATAGA AGATTCTGGTTTTCATTGAAATAGCGCATTCTGATATGCTAATCTTTAACTGCTAATGTTTCAGAGTTGGATAGTTCAAA CCCAAAGCTCATGAATGAGTCACGTATTTTGCGAATAGCTCGAGGTTCTGGTCATCAAGTTAGGGAAGTGATGGAGATGT TGGAAGAATACAAGCGTTTGACAAAGATGATATGGAGCAAAATGAAAGGGCTCAAGACATCAAAGAAGGGTGATATGAGT GCCCTGTCGAGAAATATGAATGCTCAGCAAATCATGAACTTGATGAAGCAGATGGGATCTACAAAAGACATGATGGGAAG GTTTGGCGGTGGTGGTAATTAGTTTATTGGGCAGGACATATGAGCTGAGTGGAGTGGTGCTAAAATAAACCACTACTGCT TCAGAACCAGACTCTGTGAGCAGGCTAAGCAGTTCAATAGGTGCTAGATAGGCTCTGCATAATTTTTTTTTGTAATGTTG AATTCAGTTCAATAGGTGCTTAAATAAACCACTACTGCTATATCTTTTTTTGTAATGTTGAATTCTTTTCCTTTTCTATA TATTTACTTATTATTTATATAGTCTTAGATATCAATCCAAGTAATCTAATTTTTTTTTAAAAATCGGAATTTTTTTTTAA AATCAGAATTTTTATGAGTAACAAAAAAATGCTGCATTGATTTTATATGCTGGTCAATGGAAGAGATGCAAGGTTTAAAT TCTGTCATTAGATTTGTCAATTACAACTAATTAGGGACAATATTTGTTATTCACATTAAGCACAGCCATTCATTCTACTT CCAGCGGAACCAGAAACGTTTGAAACCAGTTTATAGAACCAAACAGGGCATGGTTGTTCATTAAATTTGATGATTGGTTT TATGATTAAGCTCGGTTACTGTTCGCAAAGAATGCTATTCTGGCAGTGAAATCATACTGGTGCAAGATACAGGGACAACA TTAACAGAAATAACTCAGTAATAGATATAGAGTGCATGCGTGTAGTATTGAACATGTCATCTTTCGAAAAACTTGCTTAG AACAGTTTTTTGCAAATGGACTTCGTCTTCCTCTTCCTCCTTGTCTTCCTCATATTTGATATTGGCATTTAGAGAACATC GAAGAACAGCATTGATTTGTTTCCTTAAACTGGCATTGTCTACAAACATATTCGCCAGCATCGTCCTCAATTCATTGCTA GTTTTCCCCGTATCATCTGTAGTTACATCACGTGCCTCTTCCATAGCAACAACAGCATTTTCTACATCTTGTGCTAACAG CTGTGCCTGTTCCGTTTTTGCAGACAGCATGTAACCAAAACAGTAAGTAGAGGGAACACCAAATAGAAAGTTACTATGCA GTAAACATGGTATAACCCGAATGATAAGTGCTATGTGACTTTTAGAATTTTGTCTGCGTGAAATTGAAGAGATCCTTGTC TTTCTAATGAAACAAGTCAATTATATTTGACAGGACTTAAAATACAAACTATCTATCACACATTCACACTGAACGTAAGC AGATTCAATCTAAACCACACAGCCATTGCATTACTCTGAAAGACCCATCACTTAGCATGATTTCAAAGAAAGCAGATGCC CATGGAAATAATAATGGGTAAAGAATGGAGTGTAATGCCCAACACTGGAACAACAATGAGTAGGGGAAAAGGGAATATCT AATCTAAGGATGATTTAGTTGTTCAAGGTGGATATCATACCTCCGCAAGCAAGAGACCAATCCGGTTATCTGATGTTGCT AATAAATCCAAAGCATCGGATGGAGAAGTGTCAACATTTAGTTTATCTTCCTCTTCCACGAGGAAATTTACACTGCACTC CTGAAGTCTCTTCTGAAGGATTGCACACTCATGCAGCAACTTTGCATTAGCATTATGTGAAATTTCAATTCTTTGCTTTT CCTTCTGGAGAATTCTCTGAAGATACAGTAAAAAATACCATGAAATTAATTGTATACCAAACTTTTAGGACACCCTAAAA CAGAAGATTCAAACAATTTTTTCCATTAAAAAAAATCATGAATGAGAAATTTCAAAAAATACAAGTAAATAAGTTTCTCG CAGAAACTCGTCAGAATAGATTAATAAGATCTGCCCTCCCTCCATCTCTTAAACTCATGGAATCAGTCAAATTCATAGTT TCATAGTCTAAGATATGTCTAAAATTATTCAGTACTAGTTGCAAATTACAAGAACTGAAAGGACAATACCTCTACATCTA TTTTCTCCTTCATTAATTCGCTGAGCTGTTGCTTCAGTTCTAACTGAGAACTTCTAAGGGATTTTACCTCCTTTATTAGC AACTTTGTATCTGTCTTTGATTTCATCTCAAACTCATCATGATGTTTCTGCAGGTTCTTAAGTTGTTCTGTAGTCACATC TAGCTCTTGCTGCAACACTTGCTTCTCATGAATGATGGATGCTTTTGTTGATTCTGCTAGCAGCTTTTCATCCTAAATCA ATATAACTTTTCACTGTAGACTGTCAAAATTGAATGATAAGAGATATTGATTGAAGTTAATAATCACTACCAGACCTCTT CAATCTTTAATTTCATTTCTGTCTCCAGGCACTTCCTCCGAAGTTCCTCCATATCCCACTGCATTTGTGTAAACCTTTCC TTTTCGGTTAAAACAGCCTGCTGCATGTTTTCTCTGCAATTCAATCGGGTAGTTTCAAGTTCAACTTCCAAATCTTTGAC CTACAAGTAAGATGAAATATTTGAACATATGAACATAAAAACTCCAATATTTTATGAATAAAGAACTGAGAAACCATATT CTGCTAAGGTTAAAGCACCAAACTGCTTGTGAAGATTTACTAAAACATATAAAGCAAGTGGCAAATGAAAACTTCCATTT CAAAATTCAGTAATAACTGAAAATCTTAAAACACATATTGGGCACCTTTGTCACAAGATATCGTTTTGTAGCCATTTCTT GATTCAATCTTGCTATAAGATCCTCTACATCTGTTTTAGCTGTGGCTACTCTCTGCTTATGGGTATTAAGAATTCTGTTC AGCTTATGTCGCTCATCCAATGGAAAAGCCATCAATAGATCTGAGTTTCTGGAGGATTCATGGCTCCCAGAAAGGTCATG TGAAATGTTCTGAGGAAAAGTGTTCAAAGTTGAATTTGATGTTTCAGTATTCCTCACAGAACTTAAGTCACTTCCACTAC TTTCCATTGACAGTTTCCTGACATGAGCATTGGTATAATCTTGTATAGCTGGTGTAAACCTAGTTCCATCTAGACAAAAA GCTACAGCATCAGAAGTATTCTTAGTGATTTCGTCTGTACGATTATCCTCATAACTAAAATCATTGCTGTTGGATGTGGC ATGCTCAGCAGTTGTTTCAGATGGATTAATAAAGTCACGTTTAGATGTGAAATTTGCCATGAATCGATCAGAACGTTTAT CTTTTCCATGCCTCGGTGTTCCCAGCTCAGAAACCTCATAAGGGGTATCATCACCAGAAACGGACGCAGCAGACGAACTA TGAGCTTTCATAGAGCTATGCAAGTTATCTCGCAGCATAAGAGATGTTGCAGTGTCAGTAGCAGCAGTTTCATCCGAAAC ATGCTGATTCACATCATGAAATGCTGAAAAACATCAAAACAGTAAGGTATTAAATGTTTGTGGACCATCACACTGACTGT TCTTTATACTCTTTCAAAAAACAAAGAACCAGTTCAAAATCCAACATACAAAGGCAAAACATAATGTTTAGGTATGTAAG GGAAAACATACAAGACCTAGCAGCAGCTTCAAGCTCAAGAAATATCGCTACTGGGGCACTTCTTGATACAGCAATGTCTG ACAACAATTTTTCCATCCAATCCTCTAATAAGCACCGGCGCTGAAAGAAGTCAAATTGTCAGTATCAAATTGCATAGAAA TCATATGGCAAATAAAACAATAATTCAGATGATGAAAACAAAAGTATTTCTCAAGCATATAACATGGACTTAACAGAAAA ACAAACAATTAGTGCAGTAATAGTGTAATACATAAAGAGCATGTAATGTGATGTAAAGTAAGGTACCTCTTCCAAAAGAG TATGGCTTTTAATCCTCAAAATCTTTCTTGGTGGAGGTGGAGGCAGACTTTTCATGGGGAATTCTTTTTTCAGCTGGAAA AGTAAAGGGAAACAAAACAAGAATAAGTTGAACATCATCACATCCATAATAGCTCAAAATTGCAGGTGCATAGAATAGAA AGACAGACTCACATCAGTGAACAAATTGAGGAAATCACTAAATCTGCGCAAAATGATACGGGTAGTGGTGATAGCTTCCG GGGATCTTATACCAACTTGAACCCTGTAAAACTATAACAACCTGAGAATGTTAACAAGTTCCATAAAAAAAATCCAATTT TTCATACACCCCAACAATAACAACACACACCCAATTTTTCTCTCTATCTCTCTTCCCATCACATCAAATCATATATCCTT TCTCTAACTTCCTCATTTGGGTGTTTACACTCAAAATTGGTGTAGATCAAACATTTCCCTTACTAAAAAAATCCCATTTT CATACCCTAAACACTAAGAAGTAAGAACACCCCACATAAATATACCTCAATTTTCTACTTCTATCTTCCTAATTCCTATA ATATCACATCAAATTTCAGCTTAAAACACAACAACAAATGAAATAGAATTGAAGACAGGATGAAAATGAAAAATACGAAC CACAACAGGATCAGAAGAAGGATTGGATTGAGGAACAGTGAGCCAGGAAGGAAGCGTTACAGAGAAAGACCAAGCATCAG TGGTATGGGGATGATGAGGCCAAACAGTGTTGCGACCGTTCCAGTAGCGAGGAGGAGGACTCCAATCCATGCCGAAGGGA AGAGGGGAGGTTCCGTCGTGACAGTGGACCGAAACGGTGTCGTTCGGAAGGGAAAGGCCATCATCGAATGAGTTCGGGAA TTCGTGATCATCGTCGTAGGAAGAAGAAGGATAAGGGAAATTGAGATTGTCGAATAAGCTTAGAGAAGAGAAATCGTGTG CATACGCATGCATCTTCTTCTTCTCCGATGATGATGATGATGATGATGAAGTTGAAGAACAGTAACTGATAACTGTCGCC ACCTACCACCGCTTTCCTTCTCCGCCGTGGATAGAAAAACACAGTCCAATGAAATCATTGTCTTTTTTTATTTATTTATT TATTTGTATGTCAATAGGTATTTTAGTTTAATCCATTT
CDS sequence (LotjaGi3g1v0007800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTAGCGCAGTTAGGGGGGAGCATTTCGCGTGCTCTCCAGCAGATGAGCAATGCCACGGTGATCGACGAGAAGGT CCTCAACGAATGCCTCAAGGAGATCACTCGAGCTCTTCTTCAATCCGATGTTCAATTCAAGCTCGTCGCCGACATGCAGA CCAACATCAAGAAGATTGTCAACCTTGACCATCTCGCCGCCGGTCACGACAAACGCAAGATCATCCAACAAGCTGTGTTT AATGAGCTCTGCAAAATGCTGGATCCTGGGAAGCCCTCTTTCGCTCCCAAGAAAGGAAATACAAGTGTGGTCATGTTCGT TGGTTTACAAGGTTCTGGAAAAACTACAACCTGTACAAAATATGCACATTATCATCAGAAGAAAGGATGGAAGCCAGCTC TAGTTTGTGCAGATACATTCAGAGCTGGTGCATTTGATCAATTGAAGCAAAATGCCGCTAAAGCTAAGATCCCTTTCTAC GGAAGCTATATGGAGTCAGATCCTGTGAAAATTGCTGTGGAAGGTGTGGAGAGATTCAAGAAAGAAAACTGTGATCTTAT AATTGTTGATACAAGTGGGCGGCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGCCAAATTTCGGAAGCAACGAACC CAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGCCAGGCTGCTTTTGATCAGGCCCAAGCATTTAAACAGAGTGTC GCAGTTGGAGCTGTAATTGTTACCAAAATGGATGGCCATGCCAAGGGTGGTGGTGCTCTTAGCGCTGTTGCAGCAACAAA GAGTCCTGTCATATTCATTGGAACTGGAGAACATATGGATGAGGTTGAAGTTTTTGATGTTAAGCCGTTCGTTAGTCGTC TATTAGGCATGGGTGACTTGTCTGGGCTTATGGACAAAATTCATGGAGTTGTTCCTAGGGATCAACAGCCTGAACTGCTT GAGAAGCTGTCAGAAGGACACTTCACATTGAGGATGATGTATGAGCAGTTTCAGAACATACTTAAAATGGGTCCTCTAAA CCAGGTGTTTTCTATGCTTCCAGGATTTAGTGCTGAACTAATGCCCAAAGGCAGTGAGAAAGAAGGCCAGGCAAAAATTA AGCGTTACATGACAATGATGGATTCAATGACAAACAAAGGCAAGCATTGTGATTTGATTGTCACAAAGATCAGCTTCATG TATAGAAGATTCTGGTTTTCATTGAAATAG
Protein sequence (LotjaGi3g1v0007800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLAQLGGSISRALQQMSNATVIDEKVLNECLKEITRALLQSDVQFKLVADMQTNIKKIVNLDHLAAGHDKRKIIQQAVF NELCKMLDPGKPSFAPKKGNTSVVMFVGLQGSGKTTTCTKYAHYHQKKGWKPALVCADTFRAGAFDQLKQNAAKAKIPFY GSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQISEATNPDLVIFVMDSSIGQAAFDQAQAFKQSV AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEVEVFDVKPFVSRLLGMGDLSGLMDKIHGVVPRDQQPELL EKLSEGHFTLRMMYEQFQNILKMGPLNQVFSMLPGFSAELMPKGSEKEGQAKIKRYMTMMDSMTNKGKHCDLIVTKISFM YRRFWFSLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 386 | 386 | 8.1E-250 | – | |
| SUPERFAMILY | 1 | 93 | 93 | 5.23E-21 | ||
| PANTHER | 1 | 386 | 386 | 8.1E-250 | ||
| TIGRFAM | 2 | 391 | 390 | 1.1E-208 | ||
| SMART | 2 | 87 | 86 | 1.6E-11 | ||
| Pfam | 6 | 83 | 78 | 1.5E-15 | ||
| Gene3D | 7 | 306 | 300 | 8.4E-117 | ||
| Gene3D | 91 | 285 | 195 | 8.4E-117 | – | |
| SUPERFAMILY | 96 | 298 | 203 | 1.75E-49 | ||
| SMART | 100 | 277 | 178 | 2.8E-4 | ||
| SMART | 101 | 296 | 196 | 5.1E-94 | ||
| Pfam | 102 | 296 | 195 | 2.3E-78 | ||
| CDD | 102 | 294 | 193 | 4.81345E-139 | – | |
| ProSitePatterns | 269 | 282 | 14 | - | ||
| SUPERFAMILY | 298 | 390 | 93 | 4.67E-22 | ||
| Gene3D | 311 | 403 | 93 | 5.2E-22 | ||
| Pfam | 328 | 391 | 64 | 1.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | SRP-dependent cotranslational protein targeting to membrane | The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane. | ||
| Molecular function | 7S RNA binding | Interacting selectively and non-covalently with 7S RNA, the RNA component of the signal recognition particle (SRP). | ||
| Cellular component | Signal recognition particle | A complex of protein and RNA which facilitates translocation of proteins across membranes. |
Expression pattern of LotjaGi3g1v0007800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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