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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0096000 |
| Transcript ID | LotjaGi3g1v0096000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT4G21380.1 receptor kinase 3; Swiss-Prot: sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8; TrEMBL-Plants: tr|A0A072UP20|A0A072UP20_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0096000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:11957976..11962235) extracted from Lotus japonicus Gifu genome v1.2.
TTGTACAATAAGGCTTCATATATTTATAACAGAAACTTTAACATTGTAATTGTGTTCAAGTTATTTTGACAAAGATAAAT AAAAAAACAACTTTTGTTGTACATATTAATGTTTATAATTAGTTGTTGATGCCTATGTTTCGGTTAAGCCATATTTTGTG TTGTGATTAGTAAATGTTACAATAATTGGTATGTGATTTAAATAGATTGAGTTAAATAAATTGATTGAATAAATATGATA AATTGAAGAACTGCTCGTCCGTGCATTGCACGGAGACGGGCTAAAATCCTAGTTCATATATATAGAGATATACCTCATCT CCCTGTATCCGAATAACCAATTTGTATCACACAAATGGACATTATCATCACATTCATAATCACACTTACCTACATACTCC TCCTTCTCCCTTACAAACTTTCCATAGCAGCTGACTCCATTCATTTGTCACAACCCCTCACCAATGGCAAAACCTTGGTG TCCAAAGATGGAACCTTTGAACTCGGTTTCTTCCGCCCGGACGGTAACTCTATCAAAACATACCTCGGCATCTGGTTCAA GAACATCCCTGTTCGGAAAGTCGTTTGGGTTGCAAACAGAGCCAACCCAGTCAACGGTTCAAAGGACATCATGTTAACTG TGAACATGACAGGCAACCTCGTCCTCACACAAGATGACACTGTCGTGTGGTTCACAAACATTCAGGAACAAGCACTGAAT AACAATTCAGTGGCTGTGCTATTGGATAGTGGCAATCTTGTGGTGGGGAATGACCGACAAGGGTACTTGTGGCAGAGCTT TGACTATCCGTCCGACACATTGCTGCCAGGGATGAAATTGGGAAGAAGCTTAAAATTGGGACATGATTGGAAAATAACAT CATGGAAGAGTCCACAAGATCCATCCCCTAGTGAATTTTCATGGGGTTTACTACACCATGATAATTATCCTGAATATTAC ATCATGAAGGGAACAAATATAAAATTGTCCCGTTTTGGACCATTCAATGGCCAAAATCCTAGTGGAGTGCCAGAAATAAG ATACCTTACAACTTCTACTGATCCTCTCCAAAATCGCTATGAGTTTGTCACCAACAAAGATGAGAGTTTCTACAGGTATA GCTACAACACAACCAACCCGGTCATCTCAATTATAGTGTTGAACCAAGCCACTGTGTTTCGCTATGTGTGGGTTGAACAA GATCAAATTTGGAGGACATATCGGTCATTTCCTAAAGACAAGTGTGACACTTATGGTCTTTGTGGAGCCTATGGGAATTG CATAATTAAAAGAGGACAAATGTGCCAATGTATCAAGGGGTTCAGTCCAAAGTCACCACAAGCATGGACATTAACCGATT GGAGTGGAGGGTGTGTCCGAGATAAACCATTAAGCTGCAACAATGGGACGCAAAAAGATGGGTTTATCAAATTTGGTGGC CTTAAAGTTCCGGATACAGCACATGCATCGTTGAATGAGACTATGGGTCTTGAGGAATGCAGAGACAAGTGCTTGAATAA TTGCTCTTGTATGGCTTACACAAATTCAAACATAAATGGTGGAGGTAGTGGCTGTGTCATGTGGTTTGGCGATCTAATTG ATATAAGACACTTTGATGATGGTGGTCAAGATCTTTATATTCGGATGCCTACTTCGATGTTAGGTAAATGCTTTATCGAA GTTAAATGCTAGCCAACCATGGTTTGCTCATTAATCTTCCCATTTGAATATTCTTGGTCTCTTCTTGGATCTAACTTTAT TCACTTTTTATTTTTTTCTGTTACATTAAAATTTGAAGGGACTGAACACAGGCGTGAACGAAGGATTATAATTTATATCA CCATTGCTTCAATTTGTGGATTGCTTCTACCATGTCTTTATTTTGTTTGGAGAGTCCACAAGAAGATTGTTGGTAAGTTT ATTTATCCCTAACTCTCTTACTAAGATGCATGATAACCACACAATTTTGTATAGATTTTAGAAAATTATATTATTTGTCG TGAAGAAGATCTATTATTTTTCAATTAGGCTTGAGAATGATGCACATGTGAAATTACTTTTCTTACACTCCTAGCATATA ACTCAAGTTGGTTCCTGTAACCAGAAATAGAGAGGATAAGGGATGTAGGGTACTATAGAGCAACACGAATTGGGTTCCTA GCTAGCATATAACTCAAAGTCATTGCCTTGATTTCTAGACATGTATTCATCTTACTAACTTTAGGTGTTGTTTTAGTTTT AGTAGATGTAATTTCAAATTTCAAAAATTAAATCAAATTTAAGAGAAATTAGTGGTTTTTTAAATTTTAGAGACTTATTG ACACACATACACACATACTATGTGGGTAAGTTGGATAATTTAGTACACATACCCATATATATTTGTCGATAGTTAGCTAT ATCCATGAACATACTCATCTAACAGGTTTTACGCCGCTAGCGATGTGTATTTTGTACAGGTACTTAATAGGTCTGAAACC TATTGTTATCCTTTATTACACAAGTGTGGTGGTGTAAATTAAGTACTAGAGTGCTTTGGTTAACTTGATAAACCTAATAA ATTGACTTGTAGGTCAATATAGATCTTTATGCTATGTTATTGGAGTTAATCATAATAAATGATTTGAAGTTAAATAATTT TCTATGAGTTGTATTGAATGATTCCATGTTCCATTTTAACTTTCTTGTCAAACGAGCAATTTAATTTGTGTTAACTTTTT TCGTTTTCTCCATTTTATAGAAAGATCTCAAAGGCATATGGCTGATATAGATCTCCCACTGTTTGATCTAACAACCATTG ATGCAGCCACTGATGGCTTCTCGATGAATAAAAAGATTGGAGAAGGTGGTTTTGGACCAGTATATTGGGTAAATCAATAT TCCAGCATTATTGGCACTAAAAAAACAACTAAAAAGAATGAATAACATATGAAAGCATTAACTCATGAATTTCATTATGT AGGGAAAATTAACAAATGGTCAAGAAATAGCCGTGAAGAAACTTTCAAGTTTATCGAGTCAAGGAATGACTGAGTTCATA ACTGAAGTGAAACTAATTGCACAACTTCAACACCGAAATCTTGTAAGACTTCTAGGTTGTTGCATTGAAGGACAAGAGCG AATTTTGATTTACGAATACATGGACAATGGTTGCCTACACTCATTCATTTTTGGTATGAAATATCAAGAAACTTAGTATT AATTACATTTCTGATTATTAACATTAATGATGACTTTCAAAAAAAAACATGAATGACGTATGCACCATACTAAACTTGAA CGTATTTGATTTGAAAAACAGATAATATTAAAGGTAAATTGCTAAAGTGGCCTCAACGGCTCAACATAATTTGTGGAGTA TGTAGAGGGCTTGTGTATCTTCACCAAGATTCCAGATTGCGGATTATCCACAGGGATCTCAAAGCTAGTAATATTTTACT TGATCAAGATTTAAATCCAAAAATATCAGATTTTGGAACAGCTAGAACTTTTGGAGGAGACCAGACAGAAGGAAACACGA AGAGAATAATTGGGACCTAGTAAGTGTTTGACTATTAAAATGTTTGTTAATATATATATATATATATATGCATATATATG ATATTTTTATTTATAATGGTTTCTTACAGTGGGTACATGGCTCCGGAGTATGTTGCAAAAGGGATTTTTTCAGTAAAATC TGATGTTTTCAGTTTTGGTGTTCTATTGTTAGAGATCATATGTGGCATTAGAAATAAAGCATACTATCACACAGATGACA ATCTTAACCTTGTTGGTCAAGTAAGTATTTAATTTAATTTTAGTTCACGTATGTTAAATTTCAATTCATTATAATAAATA AATAAGTTATTTCCTGATTCAGGCTTGGACATTGTGGAAAGAAGGTAGAGCATCAGAGTTAATTGACTCAAACATTGAAA ACTCATATGTTGTTTCGGAAGTATTGCGTTGTATGCATGTTGGTCTCTTGTGCATACAACAAAACCCAAACGATAGGCCT ACCATGACCTCTGTCATGCTAATGCTAGAGAGTGAGATGAGGCTGGAGGTGCCTAAAGAACCTGGTTTCTTTTATAGTAA TATTTCACCTGATTCATGTTTAAGTAGGAGTCGGAGGGATAGAAGTTTAGCATATGATGTAACCTTTTCTTCATTTGGTC CTCGATGAATATTCGTATATGACATAAATGCATAAGAGCTACAAGCACGCCAACAAAAAGAACTGACTTTTTTCCATTAT TCATGTATGCTCTGCCTGAG
CDS sequence (LotjaGi3g1v0096000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACATTATCATCACATTCATAATCACACTTACCTACATACTCCTCCTTCTCCCTTACAAACTTTCCATAGCAGCTGA CTCCATTCATTTGTCACAACCCCTCACCAATGGCAAAACCTTGGTGTCCAAAGATGGAACCTTTGAACTCGGTTTCTTCC GCCCGGACGGTAACTCTATCAAAACATACCTCGGCATCTGGTTCAAGAACATCCCTGTTCGGAAAGTCGTTTGGGTTGCA AACAGAGCCAACCCAGTCAACGGTTCAAAGGACATCATGTTAACTGTGAACATGACAGGCAACCTCGTCCTCACACAAGA TGACACTGTCGTGTGGTTCACAAACATTCAGGAACAAGCACTGAATAACAATTCAGTGGCTGTGCTATTGGATAGTGGCA ATCTTGTGGTGGGGAATGACCGACAAGGGTACTTGTGGCAGAGCTTTGACTATCCGTCCGACACATTGCTGCCAGGGATG AAATTGGGAAGAAGCTTAAAATTGGGACATGATTGGAAAATAACATCATGGAAGAGTCCACAAGATCCATCCCCTAGTGA ATTTTCATGGGGTTTACTACACCATGATAATTATCCTGAATATTACATCATGAAGGGAACAAATATAAAATTGTCCCGTT TTGGACCATTCAATGGCCAAAATCCTAGTGGAGTGCCAGAAATAAGATACCTTACAACTTCTACTGATCCTCTCCAAAAT CGCTATGAGTTTGTCACCAACAAAGATGAGAGTTTCTACAGGTATAGCTACAACACAACCAACCCGGTCATCTCAATTAT AGTGTTGAACCAAGCCACTGTGTTTCGCTATGTGTGGGTTGAACAAGATCAAATTTGGAGGACATATCGGTCATTTCCTA AAGACAAGTGTGACACTTATGGTCTTTGTGGAGCCTATGGGAATTGCATAATTAAAAGAGGACAAATGTGCCAATGTATC AAGGGGTTCAGTCCAAAGTCACCACAAGCATGGACATTAACCGATTGGAGTGGAGGGTGTGTCCGAGATAAACCATTAAG CTGCAACAATGGGACGCAAAAAGATGGGTTTATCAAATTTGGTGGCCTTAAAGTTCCGGATACAGCACATGCATCGTTGA ATGAGACTATGGGTCTTGAGGAATGCAGAGACAAGTGCTTGAATAATTGCTCTTGTATGGCTTACACAAATTCAAACATA AATGGTGGAGGTAGTGGCTGTGTCATGTGGTTTGGCGATCTAATTGATATAAGACACTTTGATGATGGTGGTCAAGATCT TTATATTCGGATGCCTACTTCGATGTTAGGGACTGAACACAGGCGTGAACGAAGGATTATAATTTATATCACCATTGCTT CAATTTGTGGATTGCTTCTACCATGTCTTTATTTTGTTTGGAGAGTCCACAAGAAGATTGTTGAAAGATCTCAAAGGCAT ATGGCTGATATAGATCTCCCACTGTTTGATCTAACAACCATTGATGCAGCCACTGATGGCTTCTCGATGAATAAAAAGAT TGGAGAAGGTGGTTTTGGACCAGTATATTGGGGAAAATTAACAAATGGTCAAGAAATAGCCGTGAAGAAACTTTCAAGTT TATCGAGTCAAGGAATGACTGAGTTCATAACTGAAGTGAAACTAATTGCACAACTTCAACACCGAAATCTTGTAAGACTT CTAGGTTGTTGCATTGAAGGACAAGAGCGAATTTTGATTTACGAATACATGGACAATGGTTGCCTACACTCATTCATTTT TGATAATATTAAAGGTAAATTGCTAAAGTGGCCTCAACGGCTCAACATAATTTGTGGAGTATGTAGAGGGCTTGTGTATC TTCACCAAGATTCCAGATTGCGGATTATCCACAGGGATCTCAAAGCTAGTAATATTTTACTTGATCAAGATTTAAATCCA AAAATATCAGATTTTGGAACAGCTAGAACTTTTGGAGGAGACCAGACAGAAGGAAACACGAAGAGAATAATTGGGACCTA TGGGTACATGGCTCCGGAGTATGTTGCAAAAGGGATTTTTTCAGTAAAATCTGATGTTTTCAGTTTTGGTGTTCTATTGT TAGAGATCATATGTGGCATTAGAAATAAAGCATACTATCACACAGATGACAATCTTAACCTTGTTGGTCAAGCTTGGACA TTGTGGAAAGAAGGTAGAGCATCAGAGTTAATTGACTCAAACATTGAAAACTCATATGTTGTTTCGGAAGTATTGCGTTG TATGCATGTTGGTCTCTTGTGCATACAACAAAACCCAAACGATAGGCCTACCATGACCTCTGTCATGCTAATGCTAGAGA GTGAGATGAGGCTGGAGGTGCCTAAAGAACCTGGTTTCTTTTATAGTAATATTTCACCTGATTCATGTTTAAGTAGGAGT CGGAGGGATAGAAGTTTAGCATATGATGTAACCTTTTCTTCATTTGGTCCTCGATGA
Protein sequence (LotjaGi3g1v0096000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIIITFIITLTYILLLLPYKLSIAADSIHLSQPLTNGKTLVSKDGTFELGFFRPDGNSIKTYLGIWFKNIPVRKVVWVA NRANPVNGSKDIMLTVNMTGNLVLTQDDTVVWFTNIQEQALNNNSVAVLLDSGNLVVGNDRQGYLWQSFDYPSDTLLPGM KLGRSLKLGHDWKITSWKSPQDPSPSEFSWGLLHHDNYPEYYIMKGTNIKLSRFGPFNGQNPSGVPEIRYLTTSTDPLQN RYEFVTNKDESFYRYSYNTTNPVISIIVLNQATVFRYVWVEQDQIWRTYRSFPKDKCDTYGLCGAYGNCIIKRGQMCQCI KGFSPKSPQAWTLTDWSGGCVRDKPLSCNNGTQKDGFIKFGGLKVPDTAHASLNETMGLEECRDKCLNNCSCMAYTNSNI NGGGSGCVMWFGDLIDIRHFDDGGQDLYIRMPTSMLGTEHRRERRIIIYITIASICGLLLPCLYFVWRVHKKIVERSQRH MADIDLPLFDLTTIDAATDGFSMNKKIGEGGFGPVYWGKLTNGQEIAVKKLSSLSSQGMTEFITEVKLIAQLQHRNLVRL LGCCIEGQERILIYEYMDNGCLHSFIFDNIKGKLLKWPQRLNIICGVCRGLVYLHQDSRLRIIHRDLKASNILLDQDLNP KISDFGTARTFGGDQTEGNTKRIIGTYGYMAPEYVAKGIFSVKSDVFSFGVLLLEIICGIRNKAYYHTDDNLNLVGQAWT LWKEGRASELIDSNIENSYVVSEVLRCMHVGLLCIQQNPNDRPTMTSVMLMLESEMRLEVPKEPGFFYSNISPDSCLSRS RRDRSLAYDVTFSSFGPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PIRSF | 1 | 818 | 818 | 3.4E-269 | ||
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 3 | 18 | 16 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| PANTHER | 9 | 478 | 470 | 7.0E-148 | – | |
| PANTHER | 9 | 478 | 470 | 7.0E-148 | – | |
| Phobius | 19 | 25 | 7 | - | – | |
| ProSiteProfiles | 26 | 150 | 125 | 18.131 | ||
| Phobius | 26 | 445 | 420 | - | – | |
| Gene3D | 26 | 150 | 125 | 3.3E-16 | ||
| CDD | 32 | 152 | 121 | 1.53975E-33 | ||
| SMART | 32 | 152 | 121 | 5.8E-36 | ||
| Pfam | 76 | 178 | 103 | 6.7E-32 | ||
| SUPERFAMILY | 76 | 183 | 108 | 8.64E-27 | ||
| Pfam | 213 | 327 | 115 | 4.9E-22 | ||
| CDD | 345 | 432 | 88 | 2.94717E-29 | – | |
| ProSiteProfiles | 348 | 432 | 85 | 10.601 | ||
| Pfam | 351 | 417 | 67 | 1.6E-21 | ||
| SMART | 352 | 431 | 80 | 6.1E-16 | ||
| TMHMM | 445 | 467 | 23 | - | – | |
| Phobius | 446 | 467 | 22 | - | – | |
| Gene3D | 466 | 576 | 111 | 2.5E-35 | – | |
| Phobius | 468 | 818 | 351 | - | – | |
| SUPERFAMILY | 478 | 773 | 296 | 4.59E-83 | ||
| SMART | 501 | 772 | 272 | 5.4E-38 | ||
| ProSiteProfiles | 501 | 778 | 278 | 38.633 | ||
| Pfam | 502 | 769 | 268 | 3.5E-50 | ||
| CDD | 507 | 773 | 267 | 3.73275E-90 | – | |
| Gene3D | 577 | 783 | 207 | 6.7E-61 | – | |
| ProSitePatterns | 622 | 634 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi3g1v0096000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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