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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0098000 |
| Transcript ID | LotjaGi3g1v0098000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT4G27290.2 S-locus lectin protein kinase family protein; Swiss-Prot: sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290; TrEMBL-Plants: tr|A0A072TGW7|A0A072TGW7_MEDTR Serine/threonine-protein kinase; Found in the gene: LotjaGi3g1v0098000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12228889..12232978) extracted from Lotus japonicus Gifu genome v1.2.
CCATCATTGACCCTGCAGTTTAGACCGCTGGAATGGTGGACATTAAATATATATATCTAACTCAAACATGTGTATGTTCT TCTCAAGAGATGATGTAACGCACGAAGAGAGACCTAGTCTTCCCACCATTACATTCTTGAATTTCCAATTCTAGTATCTA AAAGTCTGTGTTTATCTTCAACTTCTGTTGTTCTATCCCCAAATCAACAAAAAAAAATGTCCATTCTCCATGGTATGCTT CTTATTTCCAACCTACTATTGTTGTTCTCTCAATTCACGTTTGCAACAGACACCATTACCAACCTTGACTCACTTCCTGA TGATGGAACCACCTTGGTTTCAAACGATGGAACCTTTGAGCTGGGTTTCTTCAATCCAGGCAGCTCCTCAAACCGCTATG TAGGAATCTGGTACAAGAACATCCAAGTTAGAACAGTTGTTTGGGTTGCCAACCGTGACAATCCAATCAAAGACAACTCC AGCAAGTTGATCATAAGCCAAGATGGAAACCTTGTACTTCTCAACAAAAACAACTCAATTCTCTGGTCAACAAACACAAC TGCGAAGGCGGCGAGTCCCGTTGCGCAGCCCTTAGACACTGGAAATTTAATAGTCAGAGATGAGAAAGACAACAACAGCA ACAATGAAGAAAGTTTCTTATGGCAGAGCTTTGATCATCCTTGTGATACACTGTTACCAGGTATGAAGATTGGATGGGAC AGAAAATCTGGAATTAACAGGCTTTTCACTGCTTGGAAAAATTGGGATGATCCATCTTCAGGGAACTTAACAGCAGCCAC GGTGCTTACCAGGAATCCTGAATGGGTAATTTGGAAGGACTCTGTTGAGTTTTTCAGGTCTGGACCATGGTCCAGTGCGG TACTTGAATTCACAAATAACCCAATTTATGATTTCCAATTTGTGAACAATGAAGATGAAGTGTACTACACGTTCACTCTC AAGAATAGCTCTGTGATTTCTATAAATGTTTTGAACCAAACCCTTTCTCTCCGTCAACGCCTCATTTGGATTCCAGAATC AAAAACATGGTCTATTTATCGAATCTTGCCACAAGACAGTTGTGATATTTACAATGTTTGCGGTCCAAATGGAAATTGCA TGCTTGATAAATCACCAAGGTGTCAGTGTTTAAATGGATTCGAGCCGAGATCGCCGCAACAATGGAATGCATTGTATTGG ACAGAAGGGTGTGGGAGAAGTGAGAAGTGGAGTTGTGGGGTAAAAAACAGAGATGGGTTTAGTAGATTTGGTAGCATGAA GTTGCCTGATACTACAAATTCTTGGATTGATGAGAATATGACTCTTGAAGATTGCAAGGCCAAATGCTTGCAAAATTGTT CATGTTCTGCTTATGCAAACTTGAATCCAAGTGGTGGGGGTAGTGGTTGTTCTATCTGGTTTGGTGATCTTCTTGATTTG AGAGTTTCACAGAGTGGCCAAGATCTATATGTTAGGACAGATGTTTCCAACACAGGTAAAAATTAAAGATTTGTATGAGA AGTTTTATGTCTATCTCTTTGATTTGAATTCAATTCCTATATTGCTAGTGTATTTTTATTTCTCTAAAAGAAAAATCAGT GCAAACGAGAAAAATATACACAAAAAATTAACATGGAAGTTGAACATGAGAGATGATCCTAATCCATAAGAAATAATAAC TAGTGGCACATTGCATTTATTTTGGAATTACAAGTACTTTGTTGTTTTGTCATGCCATAAATGCAGATTCTATATATCGG CATAGGACAAGTCGGCGAAGGAAAAAGATAGGCTTGGCCATTACAATCCCAGGTTTAGCAATACTTGTGATGGTGTTGGC AATCTACTACATTTGCAAGACTAAAACAGAGAAAAAAGGTAATGAATTTCTTAGTCAGAACACCTTTTCTATTTCACATT CATCGTGCATTTTCATTCTAGATTGTTCAATGAGTTAGTTTCTAGTGTCACCTCATACGGATTTGACTCCTCTAAAGTGA GAGAAAAGTTGACTTACTTTACCCCGTGACTCACTTTAGAGGAGCTAGACCCTCATAGGACTAGTATTTTTCCTTCAAGG ATTCAAATTTTTGGCATTATTTCATCTAATAAATCAAAGAGGAAACAGAGAAAGATGAAGGTAGAGATGAAGATTTGGAG CTCCCTTTCTTTGATTTTGCTACAATACTCAATGCCACCAATAACTTCTCAATTGATAACAAGCTCGGTGAAGGTGGTTT TGGGCCAGTATTCAAGGTAAATTTGTAACATGTTTAAGTGCATGTTTGGATATATGGTAGAAAATTACTGTGAAGGGCAA AATCAATGTGAACTGAAACAAATTTTTTGGCTTTTGCCATTGTCCACAATGATATTGGTCTCACTGTTACTTTTTTCATT ATGTATCTAAACATGTACTAAATAAAACTTGTGTATAAATCTCATCAATTGTTAATTGTTTTTCGATTACAAAATTTAGG GATTGATAGGTGGACAAGAGATTGCGGTTAAAAGGCTTTCAAGGACTTCCGGGCAAGGGGTGAAAGAGTTTAAGAATGAA GTTATATTATGTTCAAAACTCCAACATCGGAATCTTGTGAAGGTTGTTGGTTGTTGCATTGAAGGAGAGGAGAAAATGCT ATTATATGAGTACATGCCAAACAAGAGCCTAGATTCATTTCTTTTCGGTAAGTAGTTTTTTCAGAGCTTGTTATTTAGTA TAATAAAGTTGATTTGGTTTGCAAGTTATTTTGAAATGAAAAGAATAACCAACTTGCTGAATAATCTTGACAGATTCAGT TCAAAGTAAATTGTTAGATTGGTCCACACGCTTTAATATCTTGCATGGAATTGCTCGAGGGATTCTTTATCTTCATCAAG ATTCTAGACTGAGGATCATACATAGAGATTTGAAAGTGAGTAACATTTTGTTGGACAATGATATGAATCCAAAAGTTTCA GATTTTGGCATGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACATAATAGTTGGGACATAGTAAGTACT TTAAAATAAGCTAAAGTTTCACTTAAATCACTTGAGTTTCAAATTAATTCTTGTGTGGTTCATTTCAGTGGTTACATGGC ACCAGAGTATGCCACAGATGGATTGTTCTCTATCAAATCAGATGTGTTTAGCTTTGGCGTATTATTGCTAGAAATTATAA GTGGAAAGAAAAATAGTGCACTTACCTACCAGAGCCAGGATCACAACCTTATTGGGCATGTGAGTAACACAGAATAGAAA TGATTTTCCTTTAATAATTCTTTAGATAACAATTTTACTAAATTGTTGTAGGCATGGAGACTTTGGAAAAAGGGCATTCC ACATGAATTGATTGATGATTGTTTAAAGGACTCTTGTAAGCTAGAAGAAGTTGTCAGCTGCATTCAAATTGGTCTTTTAT GTCTACAACATCATCCTGATGATAGGCCTAACATGGCATCTGTGGTTTTAATGTTGAGCAGTGAAAATGCTTTGCCTCAA CCTAAAGAACCTGGTTTCTTATTTAAGAAGGTCTCAAATGAAGGAGAACATTCCCCTGAAAAACAAACATTTTCTTCAAT GAATGAAATATCTCTCTCATTATTGAACCCTAGATAGAGATGTTAGTTCATTCTTGGAGCTGTATATGAAATTAACTAAC TTGTACTTGTAACTTGAAATGTTCAATTATCATTACTTTCTATTGTTAGTTATAGAGAATCATGAATAGTTTTTATTCTA TTGAGATTGAGCCAAACAATTAGATTTTCCCACACATGTATTAATGGGAGGTACAAGAGGTACCCCAACCCATTACAGTA GAAAACAGAGTTCATTTGGAACAATTGGATACAAAATCACATATCAGTAAATATCATAAAGCAAAGAAGCCAGGCACATC AGGAGATAAATGCCCAGCTATTATATATCACCAAGACAGCTCAAGGGCTCATTGTACTATTCAAAACCACATGTTGAAAG TTCCTGCATTTGGCCCTCACATTCCTATGATAATATAGAAAGATTTTTTGTCATTAATTTTTTTACAACAAATATATTTT GTTTACAAGG
CDS sequence (LotjaGi3g1v0098000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCATTCTCCATGGTATGCTTCTTATTTCCAACCTACTATTGTTGTTCTCTCAATTCACGTTTGCAACAGACACCAT TACCAACCTTGACTCACTTCCTGATGATGGAACCACCTTGGTTTCAAACGATGGAACCTTTGAGCTGGGTTTCTTCAATC CAGGCAGCTCCTCAAACCGCTATGTAGGAATCTGGTACAAGAACATCCAAGTTAGAACAGTTGTTTGGGTTGCCAACCGT GACAATCCAATCAAAGACAACTCCAGCAAGTTGATCATAAGCCAAGATGGAAACCTTGTACTTCTCAACAAAAACAACTC AATTCTCTGGTCAACAAACACAACTGCGAAGGCGGCGAGTCCCGTTGCGCAGCCCTTAGACACTGGAAATTTAATAGTCA GAGATGAGAAAGACAACAACAGCAACAATGAAGAAAGTTTCTTATGGCAGAGCTTTGATCATCCTTGTGATACACTGTTA CCAGGTATGAAGATTGGATGGGACAGAAAATCTGGAATTAACAGGCTTTTCACTGCTTGGAAAAATTGGGATGATCCATC TTCAGGGAACTTAACAGCAGCCACGGTGCTTACCAGGAATCCTGAATGGGTAATTTGGAAGGACTCTGTTGAGTTTTTCA GGTCTGGACCATGGTCCAGTGCGGTACTTGAATTCACAAATAACCCAATTTATGATTTCCAATTTGTGAACAATGAAGAT GAAGTGTACTACACGTTCACTCTCAAGAATAGCTCTGTGATTTCTATAAATGTTTTGAACCAAACCCTTTCTCTCCGTCA ACGCCTCATTTGGATTCCAGAATCAAAAACATGGTCTATTTATCGAATCTTGCCACAAGACAGTTGTGATATTTACAATG TTTGCGGTCCAAATGGAAATTGCATGCTTGATAAATCACCAAGGTGTCAGTGTTTAAATGGATTCGAGCCGAGATCGCCG CAACAATGGAATGCATTGTATTGGACAGAAGGGTGTGGGAGAAGTGAGAAGTGGAGTTGTGGGGTAAAAAACAGAGATGG GTTTAGTAGATTTGGTAGCATGAAGTTGCCTGATACTACAAATTCTTGGATTGATGAGAATATGACTCTTGAAGATTGCA AGGCCAAATGCTTGCAAAATTGTTCATGTTCTGCTTATGCAAACTTGAATCCAAGTGGTGGGGGTAGTGGTTGTTCTATC TGGTTTGGTGATCTTCTTGATTTGAGAGTTTCACAGAGTGGCCAAGATCTATATGTTAGGACAGATGTTTCCAACACAGA TTCTATATATCGGCATAGGACAAGTCGGCGAAGGAAAAAGATAGGCTTGGCCATTACAATCCCAGGTTTAGCAATACTTG TGATGGTGTTGGCAATCTACTACATTTGCAAGACTAAAACAGAGAAAAAAGAGAAAGATGAAGGTAGAGATGAAGATTTG GAGCTCCCTTTCTTTGATTTTGCTACAATACTCAATGCCACCAATAACTTCTCAATTGATAACAAGCTCGGTGAAGGTGG TTTTGGGCCAGTATTCAAGGGATTGATAGGTGGACAAGAGATTGCGGTTAAAAGGCTTTCAAGGACTTCCGGGCAAGGGG TGAAAGAGTTTAAGAATGAAGTTATATTATGTTCAAAACTCCAACATCGGAATCTTGTGAAGGTTGTTGGTTGTTGCATT GAAGGAGAGGAGAAAATGCTATTATATGAGTACATGCCAAACAAGAGCCTAGATTCATTTCTTTTCGATTCAGTTCAAAG TAAATTGTTAGATTGGTCCACACGCTTTAATATCTTGCATGGAATTGCTCGAGGGATTCTTTATCTTCATCAAGATTCTA GACTGAGGATCATACATAGAGATTTGAAAGTGAGTAACATTTTGTTGGACAATGATATGAATCCAAAAGTTTCAGATTTT GGCATGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACATAATAGTTGGGACATATGGTTACATGGCACC AGAGTATGCCACAGATGGATTGTTCTCTATCAAATCAGATGTGTTTAGCTTTGGCGTATTATTGCTAGAAATTATAAGTG GAAAGAAAAATAGTGCACTTACCTACCAGAGCCAGGATCACAACCTTATTGGGCATGCATGGAGACTTTGGAAAAAGGGC ATTCCACATGAATTGATTGATGATTGTTTAAAGGACTCTTGTAAGCTAGAAGAAGTTGTCAGCTGCATTCAAATTGGTCT TTTATGTCTACAACATCATCCTGATGATAGGCCTAACATGGCATCTGTGGTTTTAATGTTGAGCAGTGAAAATGCTTTGC CTCAACCTAAAGAACCTGGTTTCTTATTTAAGAAGGTCTCAAATGAAGGAGAACATTCCCCTGAAAAACAAACATTTTCT TCAATGAATGAAATATCTCTCTCATTATTGAACCCTAGATAG
Protein sequence (LotjaGi3g1v0098000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSILHGMLLISNLLLLFSQFTFATDTITNLDSLPDDGTTLVSNDGTFELGFFNPGSSSNRYVGIWYKNIQVRTVVWVANR DNPIKDNSSKLIISQDGNLVLLNKNNSILWSTNTTAKAASPVAQPLDTGNLIVRDEKDNNSNNEESFLWQSFDHPCDTLL PGMKIGWDRKSGINRLFTAWKNWDDPSSGNLTAATVLTRNPEWVIWKDSVEFFRSGPWSSAVLEFTNNPIYDFQFVNNED EVYYTFTLKNSSVISINVLNQTLSLRQRLIWIPESKTWSIYRILPQDSCDIYNVCGPNGNCMLDKSPRCQCLNGFEPRSP QQWNALYWTEGCGRSEKWSCGVKNRDGFSRFGSMKLPDTTNSWIDENMTLEDCKAKCLQNCSCSAYANLNPSGGGSGCSI WFGDLLDLRVSQSGQDLYVRTDVSNTDSIYRHRTSRRRKKIGLAITIPGLAILVMVLAIYYICKTKTEKKEKDEGRDEDL ELPFFDFATILNATNNFSIDNKLGEGGFGPVFKGLIGGQEIAVKRLSRTSGQGVKEFKNEVILCSKLQHRNLVKVVGCCI EGEEKMLLYEYMPNKSLDSFLFDSVQSKLLDWSTRFNILHGIARGILYLHQDSRLRIIHRDLKVSNILLDNDMNPKVSDF GMARMCGGDQIEGRTNIIVGTYGYMAPEYATDGLFSIKSDVFSFGVLLLEIISGKKNSALTYQSQDHNLIGHAWRLWKKG IPHELIDDCLKDSCKLEEVVSCIQIGLLCLQHHPDDRPNMASVVLMLSSENALPQPKEPGFLFKKVSNEGEHSPEKQTFS SMNEISLSLLNPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| PIRSF | 1 | 813 | 813 | 4.2E-276 | ||
| Phobius | 8 | 18 | 11 | - | – | |
| PANTHER | 10 | 497 | 488 | 2.4E-146 | – | |
| PANTHER | 10 | 497 | 488 | 2.4E-146 | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Gene3D | 24 | 153 | 130 | 1.6E-16 | ||
| ProSiteProfiles | 24 | 146 | 123 | 20.305 | ||
| Phobius | 24 | 440 | 417 | - | – | |
| SMART | 31 | 155 | 125 | 1.2E-41 | ||
| CDD | 36 | 155 | 120 | 1.85676E-39 | ||
| Pfam | 73 | 181 | 109 | 1.3E-39 | ||
| SUPERFAMILY | 74 | 186 | 113 | 4.06E-29 | ||
| Pfam | 213 | 318 | 106 | 3.3E-23 | ||
| ProSiteProfiles | 285 | 321 | 37 | 10.812 | ||
| CDD | 339 | 421 | 83 | 5.96953E-23 | – | |
| Pfam | 340 | 408 | 69 | 1.2E-22 | ||
| ProSiteProfiles | 340 | 422 | 83 | 10.085 | ||
| SMART | 343 | 421 | 79 | 3.8E-14 | ||
| TMHMM | 441 | 463 | 23 | - | – | |
| Phobius | 441 | 463 | 23 | - | – | |
| Phobius | 464 | 813 | 350 | - | – | |
| Gene3D | 470 | 571 | 102 | 1.5E-33 | – | |
| SUPERFAMILY | 480 | 794 | 315 | 5.8E-80 | ||
| SMART | 497 | 767 | 271 | 2.8E-25 | ||
| ProSiteProfiles | 497 | 773 | 277 | 36.018 | ||
| Pfam | 498 | 765 | 268 | 7.8E-45 | ||
| CDD | 503 | 767 | 265 | 2.80594E-85 | – | |
| Gene3D | 572 | 778 | 207 | 2.4E-58 | – | |
| ProSitePatterns | 617 | 629 | 13 | - | ||
| MobiDBLite | 786 | 813 | 28 | - | – | |
| MobiDBLite | 793 | 813 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi3g1v0098000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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