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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0181800 |
| Transcript ID | LotjaGi3g1v0181800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-kinase-like protein; TAIR: AT2G01820.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SIT1|TMK3_ARATH Receptor-like kinase TMK3; TrEMBL-Plants: tr|V7BZF6|V7BZF6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0181800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25347388..25351665) extracted from Lotus japonicus Gifu genome v1.2.
TAGGAACATTCATGGTGGGTGGAGTGAACTGACACTACAGTACACTAATGTAGTTATGTTCCTTTCCTTTCTTCTTTGAT GAAACAAAAAAGTAGATGATAGTCCACATTCCCCACCTTGTCTTTTTCCCAAGTTGATCAATTTCATTCTTTCTCAATTA AATTATAGGTTCTTTTCTTTATTTTATTGTACCTATTTCTAGGTAAGCATTCACTCTCACACACACTCATGTTCAGCTTC TTTCTTTCTCCATTGAAATTGTGCATTGAGGTTATGACTATGAGTTCATTTGAAAAAGTTTCTTCCTAGCCCTAGGTATT GGGGGTGTCTTTTTTTTTACTAGGGTAACAATGGAAGCTATGAAAATTTCAATCTTTTTCTTTTTTGGTGTAATTATCAC AATGGGCTATGGTGCAACAAACCCAAATGATCTCAAGGTTCTGAATGATTTCAGAAAAGGGTTGGAGAATCCAGAGCTTC TGAAATGGCCAGACAAGGGAGATGATCCATGTGGTCCTCCTACATGGCCTTATGTGTTCTGTTCTGGAGACAGAGTGAAT CAGATTCAGGCTAAGAATCTTGGTCTCAGAGGATCATTGCCTCAAAACTTCAATCAACTCTCAGAACTCTACAATTTGGG GCTTCAGCGCAACAATCTCAGTGGAATGTTACCTACTTTTAGTGGATTGTCCAAGTTGGAATTTGCATTCTTGGACTACA ATGCATTTGATGCAATCCCAGTTGATTTCTTCACTGGACTCAGCAGCCTCAGGGTCTTGTCTTTGGAGGAAAATCCACTG AATTATAGTAGTGGGTGGTCATTTCCTTTGGATTTGGAAAAATCAGTGCAGTTAACAAATCTTTCTCTGGTGCACTGTAA TTTGGTTGGAGCATTACCTGATTTCCTAGGCACATTGCCATCCCTCACAAATCTGAGGCTTTCAAACAATAAACTTTCTG GTCCTATTCCAGAAACTTTTGCTCAATCTTCAATCCAGGTTTTGTGGTTGAATAATCAAGAAGGTGGTGGGTTCTCAGGT TCTATTGATGTTATTGCTTCAATGGTTTTCTTAAGACAGGCTTGGCTCCATGGAAACCAGTTCACTGGGACAATTCCACA GAATATTGGAAATCTCACTTCCTTGCAGGAACTCAACTTGAATAGTAACCAACTTGTTGGCTTGGTTCCTGATTCTCTAG CAAAAATGGACCTTGAAATACTGGTGCTAAATAATAACATGCTAATGGGTCCAATTCCAGAGTTCAAGGCTGCTAATTTT TCCTATGATAACAACTTCTTTTGTCAAAAAAAGCCTGGAATTGAGTGTGCACCTGAAGTTACTGCACTGCTTGATTTTCT GGATCACCTGAGTTACCCTTCATTTCTCATTTCTGATTGGTCAGGTAATGAACCATGCACAGGAAGCACAGGGCCATGGT TTGGATTGAGTTGCAGTTCCAATTCTTCTGAGGTATCTATAATCAATCTACCTAGACACAAGCTCAATGGTACCTTAAGT CCATCACTTGCTAAGTTAGATTCACTTCTTGAAATTAGGCTTGCAGGAAATAATATTAGTGGCACAATTCCTAGTAACTT CACTGAAATGAAATCTTTAAGGTTGTTGGATTTAAGTGATAACAACCTTGAGCCTCCATTGCCAGAATTTCATGATGTGA ATGTTATCACTGTTGGTAACCCCCTTAGTCAGAATGACACTGGAGGGAGTTCTATGCCTATTAACAACCCACCTTCTTCA CTTTCCCCATCCTCTCATGAGAATCATGTTCCAAGCTCAAATCAACCCAAATCAAAAGACTTCAAAACAGTGGCAATAGT GGCTGGGATTGTAGTATTTGCAGTTTTAGCTCTTTTGGTTATTTATCTCTGCCTGTGTTGCTGGAAGAACAAGAAAGCTT CCTTGGATGCTCCAAGTTCCATTGTGGTTCACCCTCGCAATCCATCTGATCAAGATAACATGGTTAAAATTGCAGTTTCA AACAATACCACTAGCAGCTTATCATCAAAGACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAAACTCAAAACTCTCA CATGATTGAGGCTGGAAACCTTTTGATTTCTGTACAAGTACTACGTAAGGTTACCAAGGATTTTGCTTCAGAAAATGAGC TAGGCCGTGGTGGATTTGGAACTGTTTACAAGGGGGAGCTAGAAGATGGGGCGAAAATAGCAGTGAAGAGAATGGAGCAT GGCGTTATTAGCAGCAAGGCACTGGATGAGTTTCAAGCTGAGATAGCTGTTCTATCCAAGGTCCGTCACCGCCATTTAGT ATCCTTGTTGGGGTATTCCATTGAAGGCAATGAAAGGCTTTTGGTTTATGAGTATCTGCCTCTTGGTGCTCTGAGCCAGC ATCTTTTCCATTGGAAAAGCTTGGACTTAAAGCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCACTAGATGTTGCGAGA GGGATGGAATACCTTCATGGCCTTGCCCGCGAAACCTTTATCCATCGAGACCTCAAGTCTTCCAATATTCTGCTAGGCAA TGATTTTCGCGCAAAAGTTTCAGATTTTGGTCTAGTGAAGCTTGCCCCGGATGGTGAGAAGTCTGTAGTAACCAAGCTTG CTGGGACATTTGGATACCTTGCCCCTGAATATGCAGGTATGGCCTTGTTTTGAATCTCCTCTTCATTCTTACCTTGAAAT AATTGTAGAAATTGAGCATTTACGGCATGATTTGGTATAATTATGAGTGGAATTACTAAGCTCTCTGCATATAAGCTATT AGTTTCTTTTGTTAGTTCATATTTATATTTTATAGCATGTTTGGATCAGTTTACTTTTTTTCTTTCAGAATCAATTATGC ACTCAAAAGCTACTCATAAAAGCTTCTTCCCATTATTGATTTTGACTTCAGGATCAATTGTAGAAAGGCTTCCTAACATG CTATTAGTTATAATGTTCTTAAATGAAAACATCTAAGTAGTGTGCAAAAGGTCTCTCTTTTTGTCCTTGTTTACGGAAAA AATAAACTTAACAAGAAATGATATCTTTTTTTTTATAAGCAAAACAAGAAATGATATCTAATTATATGTTCGTTGAGCTC AGTGTTTCAGAATTTGTTAGCAACATGTTCCTTCTATGTATCCCTTGTGTAGTAGTTCATTTTAGACCATTATTGCATAT TTGCATCATTCTTATATGATATGGATATGTGATGTCTAAGCATCTCTACCTATCTTTAAGTCTTCCAGCATTCTCAGTTT GATGGACATAGCTGAGTAAGTTTAAATGTGTTTCAGTGATGGGGAAAATCACCACAAAAGCTGACGTGTTCAGCTATGGT GTGGTGTTAATGGAACTTCTGACAGGACTAATGGCGCTTGATGAGAGCAGGCCAGAGGAAAGCCGGTACTTAGTTGAATG GTTTTGGCGAGTCAAATCGAGAAAAGAGAATCTCATGGCTGCCATTGATCCAACTCTGGAGACAACTGATGAGACTTTTG AGAGTATAAGCATTGTAGCTGAACTTGCAGGACACTGTACTGCTAGGGATTCATACCACAGGCCAGATATGAGTCATGCA GTCAATGTACTTTCAGCACTAGTGGAAAAATGGAGACCAGTTTATGATGAATTAGATTGTTACTCTGGCTTTGACTGCAC TCAACCACTTCCCCAAATGTTGGAGATTTGGAAGGAAGCAGAAAGCAAGGATGTTAGCTATAGTGCTAGTTTTGAAGACA CCAAAGGCAGTAGTACAGCCAGACCTTATGGTTTTGCAGATGCTTTCACTTCTGCTCATGCTCGATGATTTAGTGTGTTT GATTTCTAGTTGAAAGCACATTCAACTATATTTGGCTTTCCAAGACAATTTTTCCAATTGAACAAAATTGTTAGAGTGAG AAAAAACACATTCGCATTCAAACCAATGGATCATAAACAAACACGAAAGTAACTTCGATGCAATTTGGAGGTCCTGTTGC TAATGATAAAATTCATTTGGATTCACCATGTATGCTTCAGCAAAAGAGGCAAAATTGATTTGTTTCTGGTCTTTGTATTG CTTTTGTGACATTAAAATACTTTTAAAGTACTATATACTAAGATGTAGATAGATAAATATTAGTTTGGTAGTTTTGTGGC CTTATAGAAAAAATCAATTGCTATTTGGCAGAGCAACAATCCCTTACACCATAAGAGTAACAACATTCATATATATCATT TTTTTCTCTATCTCATTCGTTTTTTTTGTCACATCATA
CDS sequence (LotjaGi3g1v0181800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCTATGAAAATTTCAATCTTTTTCTTTTTTGGTGTAATTATCACAATGGGCTATGGTGCAACAAACCCAAATGA TCTCAAGGTTCTGAATGATTTCAGAAAAGGGTTGGAGAATCCAGAGCTTCTGAAATGGCCAGACAAGGGAGATGATCCAT GTGGTCCTCCTACATGGCCTTATGTGTTCTGTTCTGGAGACAGAGTGAATCAGATTCAGGCTAAGAATCTTGGTCTCAGA GGATCATTGCCTCAAAACTTCAATCAACTCTCAGAACTCTACAATTTGGGGCTTCAGCGCAACAATCTCAGTGGAATGTT ACCTACTTTTAGTGGATTGTCCAAGTTGGAATTTGCATTCTTGGACTACAATGCATTTGATGCAATCCCAGTTGATTTCT TCACTGGACTCAGCAGCCTCAGGGTCTTGTCTTTGGAGGAAAATCCACTGAATTATAGTAGTGGGTGGTCATTTCCTTTG GATTTGGAAAAATCAGTGCAGTTAACAAATCTTTCTCTGGTGCACTGTAATTTGGTTGGAGCATTACCTGATTTCCTAGG CACATTGCCATCCCTCACAAATCTGAGGCTTTCAAACAATAAACTTTCTGGTCCTATTCCAGAAACTTTTGCTCAATCTT CAATCCAGGTTTTGTGGTTGAATAATCAAGAAGGTGGTGGGTTCTCAGGTTCTATTGATGTTATTGCTTCAATGGTTTTC TTAAGACAGGCTTGGCTCCATGGAAACCAGTTCACTGGGACAATTCCACAGAATATTGGAAATCTCACTTCCTTGCAGGA ACTCAACTTGAATAGTAACCAACTTGTTGGCTTGGTTCCTGATTCTCTAGCAAAAATGGACCTTGAAATACTGGTGCTAA ATAATAACATGCTAATGGGTCCAATTCCAGAGTTCAAGGCTGCTAATTTTTCCTATGATAACAACTTCTTTTGTCAAAAA AAGCCTGGAATTGAGTGTGCACCTGAAGTTACTGCACTGCTTGATTTTCTGGATCACCTGAGTTACCCTTCATTTCTCAT TTCTGATTGGTCAGGTAATGAACCATGCACAGGAAGCACAGGGCCATGGTTTGGATTGAGTTGCAGTTCCAATTCTTCTG AGGTATCTATAATCAATCTACCTAGACACAAGCTCAATGGTACCTTAAGTCCATCACTTGCTAAGTTAGATTCACTTCTT GAAATTAGGCTTGCAGGAAATAATATTAGTGGCACAATTCCTAGTAACTTCACTGAAATGAAATCTTTAAGGTTGTTGGA TTTAAGTGATAACAACCTTGAGCCTCCATTGCCAGAATTTCATGATGTGAATGTTATCACTGTTGGTAACCCCCTTAGTC AGAATGACACTGGAGGGAGTTCTATGCCTATTAACAACCCACCTTCTTCACTTTCCCCATCCTCTCATGAGAATCATGTT CCAAGCTCAAATCAACCCAAATCAAAAGACTTCAAAACAGTGGCAATAGTGGCTGGGATTGTAGTATTTGCAGTTTTAGC TCTTTTGGTTATTTATCTCTGCCTGTGTTGCTGGAAGAACAAGAAAGCTTCCTTGGATGCTCCAAGTTCCATTGTGGTTC ACCCTCGCAATCCATCTGATCAAGATAACATGGTTAAAATTGCAGTTTCAAACAATACCACTAGCAGCTTATCATCAAAG ACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAAACTCAAAACTCTCACATGATTGAGGCTGGAAACCTTTTGATTTC TGTACAAGTACTACGTAAGGTTACCAAGGATTTTGCTTCAGAAAATGAGCTAGGCCGTGGTGGATTTGGAACTGTTTACA AGGGGGAGCTAGAAGATGGGGCGAAAATAGCAGTGAAGAGAATGGAGCATGGCGTTATTAGCAGCAAGGCACTGGATGAG TTTCAAGCTGAGATAGCTGTTCTATCCAAGGTCCGTCACCGCCATTTAGTATCCTTGTTGGGGTATTCCATTGAAGGCAA TGAAAGGCTTTTGGTTTATGAGTATCTGCCTCTTGGTGCTCTGAGCCAGCATCTTTTCCATTGGAAAAGCTTGGACTTAA AGCCTTTGTCTTGGTCACAGAGGCTTGCAATAGCACTAGATGTTGCGAGAGGGATGGAATACCTTCATGGCCTTGCCCGC GAAACCTTTATCCATCGAGACCTCAAGTCTTCCAATATTCTGCTAGGCAATGATTTTCGCGCAAAAGTTTCAGATTTTGG TCTAGTGAAGCTTGCCCCGGATGGTGAGAAGTCTGTAGTAACCAAGCTTGCTGGGACATTTGGATACCTTGCCCCTGAAT ATGCAGTGATGGGGAAAATCACCACAAAAGCTGACGTGTTCAGCTATGGTGTGGTGTTAATGGAACTTCTGACAGGACTA ATGGCGCTTGATGAGAGCAGGCCAGAGGAAAGCCGGTACTTAGTTGAATGGTTTTGGCGAGTCAAATCGAGAAAAGAGAA TCTCATGGCTGCCATTGATCCAACTCTGGAGACAACTGATGAGACTTTTGAGAGTATAAGCATTGTAGCTGAACTTGCAG GACACTGTACTGCTAGGGATTCATACCACAGGCCAGATATGAGTCATGCAGTCAATGTACTTTCAGCACTAGTGGAAAAA TGGAGACCAGTTTATGATGAATTAGATTGTTACTCTGGCTTTGACTGCACTCAACCACTTCCCCAAATGTTGGAGATTTG GAAGGAAGCAGAAAGCAAGGATGTTAGCTATAGTGCTAGTTTTGAAGACACCAAAGGCAGTAGTACAGCCAGACCTTATG GTTTTGCAGATGCTTTCACTTCTGCTCATGCTCGATGA
Protein sequence (LotjaGi3g1v0181800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAMKISIFFFFGVIITMGYGATNPNDLKVLNDFRKGLENPELLKWPDKGDDPCGPPTWPYVFCSGDRVNQIQAKNLGLR GSLPQNFNQLSELYNLGLQRNNLSGMLPTFSGLSKLEFAFLDYNAFDAIPVDFFTGLSSLRVLSLEENPLNYSSGWSFPL DLEKSVQLTNLSLVHCNLVGALPDFLGTLPSLTNLRLSNNKLSGPIPETFAQSSIQVLWLNNQEGGGFSGSIDVIASMVF LRQAWLHGNQFTGTIPQNIGNLTSLQELNLNSNQLVGLVPDSLAKMDLEILVLNNNMLMGPIPEFKAANFSYDNNFFCQK KPGIECAPEVTALLDFLDHLSYPSFLISDWSGNEPCTGSTGPWFGLSCSSNSSEVSIINLPRHKLNGTLSPSLAKLDSLL EIRLAGNNISGTIPSNFTEMKSLRLLDLSDNNLEPPLPEFHDVNVITVGNPLSQNDTGGSSMPINNPPSSLSPSSHENHV PSSNQPKSKDFKTVAIVAGIVVFAVLALLVIYLCLCCWKNKKASLDAPSSIVVHPRNPSDQDNMVKIAVSNNTTSSLSSK TGTSSLSNISGETQNSHMIEAGNLLISVQVLRKVTKDFASENELGRGGFGTVYKGELEDGAKIAVKRMEHGVISSKALDE FQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYLPLGALSQHLFHWKSLDLKPLSWSQRLAIALDVARGMEYLHGLAR ETFIHRDLKSSNILLGNDFRAKVSDFGLVKLAPDGEKSVVTKLAGTFGYLAPEYAVMGKITTKADVFSYGVVLMELLTGL MALDESRPEESRYLVEWFWRVKSRKENLMAAIDPTLETTDETFESISIVAELAGHCTARDSYHRPDMSHAVNVLSALVEK WRPVYDELDCYSGFDCTQPLPQMLEIWKEAESKDVSYSASFEDTKGSSTARPYGFADAFTSAHAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 6 | 16 | 11 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| Phobius | 22 | 493 | 472 | - | – | |
| SUPERFAMILY | 23 | 306 | 284 | 2.38E-38 | – | |
| Gene3D | 24 | 323 | 300 | 1.3E-63 | ||
| Pfam | 25 | 65 | 41 | 7.6E-5 | ||
| SMART | 90 | 112 | 23 | 150.0 | ||
| SMART | 113 | 136 | 24 | 42.0 | ||
| SMART | 137 | 160 | 24 | 46.0 | ||
| SMART | 189 | 212 | 24 | 16.0 | ||
| PANTHER | 201 | 941 | 741 | 2.1E-238 | – | |
| PANTHER | 201 | 941 | 741 | 2.1E-238 | – | |
| SMART | 262 | 285 | 24 | 0.25 | ||
| Pfam | 328 | 369 | 42 | 0.0036 | ||
| SUPERFAMILY | 328 | 439 | 112 | 3.95E-15 | – | |
| Gene3D | 328 | 451 | 124 | 4.9E-25 | ||
| SMART | 396 | 419 | 24 | 360.0 | ||
| SMART | 420 | 442 | 23 | 190.0 | ||
| MobiDBLite | 451 | 487 | 37 | - | – | |
| TMHMM | 494 | 516 | 23 | - | – | |
| Phobius | 494 | 515 | 22 | - | – | |
| Phobius | 516 | 945 | 430 | - | – | |
| Gene3D | 558 | 675 | 118 | 5.0E-32 | – | |
| SUPERFAMILY | 573 | 884 | 312 | 1.07E-74 | ||
| SMART | 598 | 877 | 280 | 7.9E-32 | ||
| ProSiteProfiles | 598 | 878 | 281 | 38.11 | ||
| Pfam | 601 | 872 | 272 | 9.3E-45 | ||
| CDD | 604 | 874 | 271 | 3.13604E-91 | – | |
| ProSitePatterns | 604 | 626 | 23 | - | ||
| Gene3D | 677 | 887 | 211 | 4.9E-52 | – | |
| ProSitePatterns | 723 | 735 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0181800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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