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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0230100 |
| Transcript ID | LotjaGi3g1v0230100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lectin receptor kinase; TAIR: AT3G55550.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4; TrEMBL-Plants: tr|V7AKE3|V7AKE3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0230100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:35961739..35966068) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTCCTTAATTTCCATGTAGGGCCCCCAACATTCTTTTTATTATTAATTTTCGGTCCACTTTAATAATTGTATTTCT ATCCCATGACAAGTTGGACCGAATCTAATCAAATGCTTTGTATTGTAAAGAGTGGTGTTTGGTTCAGCGAACACATACAT TAACTGGTCTATTTCAATCCTTAGCACATCCATCACCAACTAAACATGTTTTTTCAGTTCATTTCTATCAAAACCATTCT ACCAATACCACTAGACTGGTTTTGTATTAAATAAAGAAAAAAATTCCGAAAATTTTTATATTTTTTACACCTTCAAAGAT ACAAAAAAAAACTCTTTTGAATACTAATTAAAATGTGTTAATTTTCTATTGGAATACTTTTTTAAGTATTCATTCAAACG TGTTCTAAATGCATTGACTTTTAAAGAATGATGAGAGAAAACTATGTGTAACACAACTTATAATTAAATTAGTCTCTTTA AGCATTTAGTGTTTGATTTCTAAACACTGTGTATAGATAAGCATTTATTATGAAAGACTTGCCCTTTTAACATGATTTCA AAACCTCATGAGATAAGTCTCAAGACCGGAGTGAGGATAGCTTCAAAACAAAATGATGAGAGAGAGATGGTTGCTAACAA GTAGTAGATAGTTAAGTTTTTTAAGCATTTAGTTCATGATTCAATTCCTGAGCAGTGTGCATAGAGAAATATTTGCGATG AGAGATCTACCAAGTTAATATGATCTCAGAACTTCGAGAAATAAGTTCCATGACAGCTGGATGTGAGAATAACTTTGGCA AAAAAAAATGATGAGAGAGAGATGGTTGTTCACTATGCACTCCCCCACTCAGAGCTTTCACTTTACTGCTGTACACAACA TGTTGGCAACTAGTTGCTGTCTTTCCTTCATTCCTACACAGAATATTATTCAGCACTCATCAATATCATCACCTCACCCA ACCCCAACATAATAATATTCTTCAATCTTATCAACCTCTTTCAATTCACCATAATTATTACTTGTAATTCAAAATCAAAA CCCTTGATTTTCCACATCTCTGCTTCACTTTTTCTGCTCTCATTCATGGCCAACCTGCTTCTTCAACTCTTCCCTGTCTT GCTCTTCCTTCTGATCCCAGTTTCACCTCAGCCTGATAATCTCCTCTATACAGGATTCAAGGGTTCTGGAGCTGAAAATC TAACCTTGAATGGGGTAGCAGAGATAGAGAAAAATGGAATACTGAGGCTAACAAATGAGACAAGTAAGATAATGGGTCAT GCTTTTCATCCAACCCCTTTTCAATTCAAGAACCCTAGAAATGGTAAGGCTTTCTCCTTTTCTTCCTCATTTGCTCTTGT TATTGTCCCTGAGTATCCAAAGCTTGGTGGGCATGGCATGGCTTTCACCATTTCACCTTCCAAGGATCTCAATGCTCTTC CTAGCCAGTACCTTGGTCTCCTCAACAAAACCAACATTGGGAACTTATCCAACCACCTCTTGGCTGTTGAGTTTGACACA GTCCAAGATTTTGAGTTTAAGGATATCAATGACAACCATGTTGGAATCAACATCAACAACTTGGTTTCCAATGCTTCTGC CCCAGCAGGGTATTTCACTGAGGATTCAAGTTCAAGTTCCAAACAAAATCTTACTCTCCAAAGTGGGAAACCAATTCTAG CTTGGGTTGATTATGATTCTGCTGTAAATGTTATCAGTGTTACCCTTTCTTCATCTTCTTCAAAACCCAAAAAACCAATC TTGTCCTATGCCTTAGATCTCTCACCAATTCTTCAGGAATCTATGTATGTTGGGTTCTCTGCTTCAACAGGTTTGCTTGC TAGCTCCCATTATGTATTGGGTTGGAGCTTGAAAATCAATGGACCAGCTCCACCCCTTGATCTCTCTTCTCTCCCAAACC TTCCAGGGCCAAAGAAGAAACATACATCTGTCATAATTGGAGTTTCAGTATTTTTTGTTCTTGCACTTTCTGCTGCTATC TTATTTGGCATTTACATGTGGAGAAAATACAAGAATGCTGATGTGATAGAAGATTGGGAGCTTGAGATTGGGCCACACAG ATACTCCTACCAAGAGCTCAAGAAGGCCACAAAAGGTTTCAAGGAAAAAGAGTTACTTGGGCAAGGTGGGTTTGGTCAAG TTTATAGAGGAACATTGCCAAATTCCAAGACCCAAGTAGCTGTTAAGAGAGTTTCACATGACTCATCACAAGGGCTAAGG GAATTTGTGTCAGAAATAGCCAGTATAGGCCGGCTTCGCCATCGGAATTTGGTTCAGCTTCTGGGGTGGTGTCGCCGCCG CGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGAAGCTTGGACAAGTACTTGTTTGATGAGCCGGAAACCATCT TAAATTGGGAACAAAGGTTCAAGATCATAAAGGATGTTGCTTCAGCACTTCTGTATCTACATGAAGGCTATGAGCAGGTG GTGATACACAGGGATGTGAAAGCTAGCAATGTGCTTCTAGATAGTGAACTCAATGGAAAACTAGGAGATTTTGGGTTAGC AAGATTGTATGAACATGGGGCTAACCCAAGCACCACAAAAGTTGTGGGAACTTTAGGCTATTTGGCACCTGAGTTTTCTA GAACAGGAAAAGCCACTCCTAGCTCTGATGTTTTTGCATTTGGGGCACTATTACTTGAGGTGGCATGTGGGTTTAGACCA ATTGAGGCAAATGCATTACCAGATGATTTGATTTTGGTGGATTGGGTTTGGAAGAAATATAAAGAAGGGAGAGCACTTGA TGTGGTGGACCCAAAACTAAATGGTGTTTTTGATGAAAGTGAGGTGCTCAAGGTGTTGAAAATGGGGCTATTGTGTTCAA GTAATGCAGCCACGGATAGGCCTAGCATGAGGCAGGTGGTGAGGTTTTTGGATGGTGAAGTTGGTTTGCCAGATGAGTTG AGAAAGTCAGGGGAGATAGGTCACCAGGATGGTTTTGATGAATTCTTGCACTCTGTTGAACCTTCCTCATTTGATAAGAG GAGTTCAAGCTCCTCTATTAAACATGGAGACTTGAATTCTGGTTTTTCTTCTTTTACTAGTGAGTTAAGAAATTCACACA ACACTTTCTAAAATATTACTTTCTCTCTATATCTCTTTTTTTATCATATCAACCATTACATTTCACAGTCACAGTTGTCT CTCCTTGTTGTACAAATATTTGTTCAAAGTAATTACAAATACAAATTACTGTTGCTGGTAGAGGAGAAACAAGGTGATTC TCTACATTTTACCTGGAGTTATACTTTCTATACTCAAGATACTGGTCTGTTTTATCATCACATGTTGTATCAGAGCTGTA GACAAATTCTTGTCATGATGAATTCAATTCCCAAACGGTGAGGTTTGTATTTTACTTTTGTGTCTGTTACTAGTTCCATT TTCTGGATTCATATTGTCCCCTTTCTGACATAGTTACAAGAACAATTTTGTTTTTACTTCTGCAGTTTTCTTGTGTCCTA AGAATTGATGATACAAATTGGTTTTCAAGGGCTCCAATTGTCTCTTTTTTAGTACAGTTCAACTTGAAATTCCTATCTCA TCCCACTAGAGCATATTTTACACATGTTTTTCCTTTTTCAACATTACTAAGGTGTTTTCTGAAGAAGTGAGAAAAAAAAA CTCCAAACCTGATAGCTGAGACAAACTTCCTCATATATTTTGTAATAGGGCTAAATGTGTAACCTCAATCTTATTTATCC AAGTTGCTGATATTTTTTATTTCAGCCTCTAAGCATCTCATTCATGCTGAAAAAAATAATCCTATATTAAAAGGAGAATT TCCGATCTCCAATTTGTTGTTATTGTCATCCATTATTGAACTCAATAAACTTTTTAAGCTTTTTTCTTAGTAAGTATGGT ATTGAATTCTATGGTGTCAACCACTAAAAAAACTTTCGACTAACCTGTTCATGTCTAAGGAGGCATCTTCATGAACCTGT TCCCCAAAACTGACAACTGCTCTGGTTAACTTTTGGACGAGCCAATAACTCGAACACGTTCGGTCTGTTTTTTTAGCAAG AATCACAGCGTTACCTTACCTTCACCATGATACGGACTCCAAGTTCTTATGGCAGAGCGCGAGGAGATTGATCATATCAA TATGATGATGGGAATGGAAACCAGAACCCCATTGAAGCCCTCAAAGCTGATACAAAAGTTCTACTTCGTCAAACTCAATA GGTAGTAAACCAAGTGTTTAACTGTTTATTCCTCCAACCTATTCCCCATGCTTGGGTCAAGTTTTAACACTGTAAAAATT ATTTAAGTGG
CDS sequence (LotjaGi3g1v0230100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAACCTGCTTCTTCAACTCTTCCCTGTCTTGCTCTTCCTTCTGATCCCAGTTTCACCTCAGCCTGATAATCTCCT CTATACAGGATTCAAGGGTTCTGGAGCTGAAAATCTAACCTTGAATGGGGTAGCAGAGATAGAGAAAAATGGAATACTGA GGCTAACAAATGAGACAAGTAAGATAATGGGTCATGCTTTTCATCCAACCCCTTTTCAATTCAAGAACCCTAGAAATGGT AAGGCTTTCTCCTTTTCTTCCTCATTTGCTCTTGTTATTGTCCCTGAGTATCCAAAGCTTGGTGGGCATGGCATGGCTTT CACCATTTCACCTTCCAAGGATCTCAATGCTCTTCCTAGCCAGTACCTTGGTCTCCTCAACAAAACCAACATTGGGAACT TATCCAACCACCTCTTGGCTGTTGAGTTTGACACAGTCCAAGATTTTGAGTTTAAGGATATCAATGACAACCATGTTGGA ATCAACATCAACAACTTGGTTTCCAATGCTTCTGCCCCAGCAGGGTATTTCACTGAGGATTCAAGTTCAAGTTCCAAACA AAATCTTACTCTCCAAAGTGGGAAACCAATTCTAGCTTGGGTTGATTATGATTCTGCTGTAAATGTTATCAGTGTTACCC TTTCTTCATCTTCTTCAAAACCCAAAAAACCAATCTTGTCCTATGCCTTAGATCTCTCACCAATTCTTCAGGAATCTATG TATGTTGGGTTCTCTGCTTCAACAGGTTTGCTTGCTAGCTCCCATTATGTATTGGGTTGGAGCTTGAAAATCAATGGACC AGCTCCACCCCTTGATCTCTCTTCTCTCCCAAACCTTCCAGGGCCAAAGAAGAAACATACATCTGTCATAATTGGAGTTT CAGTATTTTTTGTTCTTGCACTTTCTGCTGCTATCTTATTTGGCATTTACATGTGGAGAAAATACAAGAATGCTGATGTG ATAGAAGATTGGGAGCTTGAGATTGGGCCACACAGATACTCCTACCAAGAGCTCAAGAAGGCCACAAAAGGTTTCAAGGA AAAAGAGTTACTTGGGCAAGGTGGGTTTGGTCAAGTTTATAGAGGAACATTGCCAAATTCCAAGACCCAAGTAGCTGTTA AGAGAGTTTCACATGACTCATCACAAGGGCTAAGGGAATTTGTGTCAGAAATAGCCAGTATAGGCCGGCTTCGCCATCGG AATTTGGTTCAGCTTCTGGGGTGGTGTCGCCGCCGCGGTGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGAAGCTT GGACAAGTACTTGTTTGATGAGCCGGAAACCATCTTAAATTGGGAACAAAGGTTCAAGATCATAAAGGATGTTGCTTCAG CACTTCTGTATCTACATGAAGGCTATGAGCAGGTGGTGATACACAGGGATGTGAAAGCTAGCAATGTGCTTCTAGATAGT GAACTCAATGGAAAACTAGGAGATTTTGGGTTAGCAAGATTGTATGAACATGGGGCTAACCCAAGCACCACAAAAGTTGT GGGAACTTTAGGCTATTTGGCACCTGAGTTTTCTAGAACAGGAAAAGCCACTCCTAGCTCTGATGTTTTTGCATTTGGGG CACTATTACTTGAGGTGGCATGTGGGTTTAGACCAATTGAGGCAAATGCATTACCAGATGATTTGATTTTGGTGGATTGG GTTTGGAAGAAATATAAAGAAGGGAGAGCACTTGATGTGGTGGACCCAAAACTAAATGGTGTTTTTGATGAAAGTGAGGT GCTCAAGGTGTTGAAAATGGGGCTATTGTGTTCAAGTAATGCAGCCACGGATAGGCCTAGCATGAGGCAGGTGGTGAGGT TTTTGGATGGTGAAGTTGGTTTGCCAGATGAGTTGAGAAAGTCAGGGGAGATAGGTCACCAGGATGGTTTTGATGAATTC TTGCACTCTGTTGAACCTTCCTCATTTGATAAGAGGAGTTCAAGCTCCTCTATTAAACATGGAGACTTGAATTCTGGTTT TTCTTCTTTTACTAGTGAGTTAAGAAATTCACACAACACTTTCTAA
Protein sequence (LotjaGi3g1v0230100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANLLLQLFPVLLFLLIPVSPQPDNLLYTGFKGSGAENLTLNGVAEIEKNGILRLTNETSKIMGHAFHPTPFQFKNPRNG KAFSFSSSFALVIVPEYPKLGGHGMAFTISPSKDLNALPSQYLGLLNKTNIGNLSNHLLAVEFDTVQDFEFKDINDNHVG ININNLVSNASAPAGYFTEDSSSSSKQNLTLQSGKPILAWVDYDSAVNVISVTLSSSSSKPKKPILSYALDLSPILQESM YVGFSASTGLLASSHYVLGWSLKINGPAPPLDLSSLPNLPGPKKKHTSVIIGVSVFFVLALSAAILFGIYMWRKYKNADV IEDWELEIGPHRYSYQELKKATKGFKEKELLGQGGFGQVYRGTLPNSKTQVAVKRVSHDSSQGLREFVSEIASIGRLRHR NLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPETILNWEQRFKIIKDVASALLYLHEGYEQVVIHRDVKASNVLLDS ELNGKLGDFGLARLYEHGANPSTTKVVGTLGYLAPEFSRTGKATPSSDVFAFGALLLEVACGFRPIEANALPDDLILVDW VWKKYKEGRALDVVDPKLNGVFDESEVLKVLKMGLLCSSNAATDRPSMRQVVRFLDGEVGLPDELRKSGEIGHQDGFDEF LHSVEPSSFDKRSSSSSIKHGDLNSGFSSFTSELRNSHNTF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 4 | 17 | 14 | - | – | |
| PANTHER | 4 | 671 | 668 | 0.0 | – | |
| PANTHER | 4 | 671 | 668 | 0.0 | – | |
| Phobius | 18 | 21 | 4 | - | – | |
| Phobius | 22 | 288 | 267 | - | – | |
| CDD | 25 | 266 | 242 | 6.61237E-95 | ||
| Gene3D | 25 | 274 | 250 | 3.1E-74 | – | |
| Pfam | 27 | 276 | 250 | 1.9E-75 | ||
| SUPERFAMILY | 28 | 284 | 257 | 7.93E-74 | ||
| ProSitePatterns | 139 | 145 | 7 | - | ||
| TMHMM | 288 | 310 | 23 | - | – | |
| Phobius | 289 | 312 | 24 | - | – | |
| Phobius | 313 | 681 | 369 | - | – | |
| Gene3D | 317 | 421 | 105 | 7.2E-32 | – | |
| SUPERFAMILY | 327 | 620 | 294 | 1.37E-79 | ||
| SMART | 345 | 615 | 271 | 2.3E-35 | ||
| ProSiteProfiles | 345 | 621 | 277 | 37.177 | ||
| Pfam | 347 | 615 | 269 | 4.7E-45 | ||
| CDD | 351 | 617 | 267 | 7.33903E-91 | – | |
| ProSitePatterns | 351 | 374 | 24 | - | ||
| Gene3D | 422 | 621 | 200 | 2.0E-58 | – | |
| ProSitePatterns | 466 | 478 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi3g1v0230100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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