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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0472000 |
| Transcript ID | LotjaGi3g1v0472000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-kinase-like protein; TAIR: AT2G01820.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9SIT1|TMK3_ARATH Receptor-like kinase TMK3; TrEMBL-Plants: tr|I1LRL0|I1LRL0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0472000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:88913776..88918381) extracted from Lotus japonicus Gifu genome v1.2.
CTGATGACTGTCTTATGAGAGTGTAACTACTTCCTTCAACATTTCACTTCCTTCCTTCTTTGATCAAAAAGAGTTCAACA CTCTTCTCTCTCTCTTTACATTCTCTCTTCTCTTTCTAACTCCTTCACCATTTTCTCAATCAAAATTCACCTATTTCTAT GTAAGAGCAAGAAACACAAACACATTCACAAAAGTTTTGGTCTTTTCCATCTGGGTATTTTTGTTTTAGTCACATTTTGG TCACAAGGCTTGGATTTTGATATTTTTCAATAATGGGGTTGTGAGTTTTGTGGAAAAGTTTCTACCTTGATTATCATTGT TTTCTCTAGGGTTGAGGTAGAAATGGTGGGTGTTTTGGTGGAAATTTGCATCTTTCTCTTGTTTTCCATCATGATTGCAA TGTGTGGTGGTGATACTAACCCAAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGGTTGAAGAATCCAGAGCTTCTC AAATGGCCAGAGAATGGAGATGACCCTTGTGGCCCTCCTTCATGGCCTTATGTGTTCTGTTCTGGAGGCAGAGTCACTCA GATTCAGGCTAAGAATTTGGGTCTTCAAGGATCATTGCCTCCAAATTTTAATCAGCTATCAGAGCTCCAAAATTTGGGGC TTCAAAGGAACAACCTTAGTGGGATGCTACCTAGTTTCAGTGGATTATCAAATTTGCAATTTGCTTTCTTGGATTACAAT GAGTTTGATGCAATCCCACTTGATTTCTTCAATGGACTCACCAGCATCACGGTCTTGTCTTTGGAAGAAAACCCATTGAA TGCTACTACTGGGTGGTCATTTCCTAAGGACTTAGAGAATTCAGGGCAATTAACCAACCTTTCTCTGGTGAATTGTAATC TGGTTGGAGAACTACCTGATTTTCTGGGCACATTGCCTTATCTCACAAATTTAAGGCTTTCATTCAACAAATTGTCTGGT GGCATTCCAGCTAGTTTTAATCAATCTTCAATCCAGGTTTTGTGGTTGAATGGTCAAGAAGGTGGTGGCATGACAGGTCC TATTGATGTTATTGCTTCCATGACCTCCCTGAGACAAGCTTGGCTACATGGAAACCAGTTCACTGGGACAATTCCAGAAA ACATTGGAAGTTTAACTTCCTTGCAGGAGCTGAACCTGAATAGCAATCAGCTTGTTGGCTTGATTCCTAATACCTTGGCA AATCTGGACCTTAAGATACTAGATTTAAGTAATAACAGGTTCATGGGTCCAATCCCAAAGTTTAAGGCTGCCAAAGTATC TGATGATTCCAATGTCTTTTGTCAATCTGAGCCTGGGCTTGAATGTGCCCCTCAAGTTACTGCTTTACTGGATTTTCTCC ATGATCTGAATTACCCTTCAGTTCTGAGTTCTAAATGGTCTGGTAATGAACCATGTGGAGAGCCATGGTTTGGATTGAGC TGCAACCCCAAATCAGAGGTAATTATAATCAATTTGCCAAGACAAAAGCTCAATGGAACACTGAGTCCTTCACTTGCTAA GTTAGATTCACTCCATGATATCAGGCTTGCTGGAAACAATATAGTTGGCAAAGTTCCTAGCAATTTTACTGAACTTAAGT CTTTAAAGTTGTTGGATTTAGCTGATAACAATGTTGAACCTCCATTGCCAAAGTTTCGTGATGATGTGAAGGTTATCATT GATGGTAACCCCCTTTTTGCTAAGCTGAGTCCCAAGCCTACTATTAGCCCACCACCTTTAAGTGCATCACCTACAAGTGC ACCACCTACAAGTGCACTACCACCTTCACTGGCACTGCCACCACCGGCACCATCACCTTCCCATATGCCAACTTCTTCTG GTCTGATCCCAAGCCCAAATCACTCTATCTCTGTCCCATTAAAGCCCCGATCAAATATCTTGCAAAGATCCAAGACAGTA GTGATAGTTGCTGGAGTTGCAATCTTTGGATTTGTAGCTCTTTTGGTAATTCCTATCATCATGTGTTGCTTGAAGAAGCA TAAGTCATCAATGGATGCTCCCAGCTCTGTTGTTGTTCTCACTAAAGATTCATCTGATCCAGAAAAGATGGTTAACTATG CTGTTTCAGATAGCACCATTGGAAGTTTATCAACAAAGACAGGGATAAGTTCTCTGACTAACATAAGCGGGGAAACTGAA AACTCTCATGTAGTTGAGGCTGGTAACCTTGTCATCTCTGTTCATGTTCTACGCAAGGTCACCAAGAATTTTGCTTCAGA AAACGAACTCGGCCGAGGCGGGTTCGGAACAGTTTACAAGGGTGAACTAGAAGATGGGGCCAAAATAGCAGTGAAGAGAA TGGAGTGTGGAGCTATTAGCAGTAAAGCAGTGGACGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTCCGCCACCGG CATTTGGTATCCCTGCTCGGCTATTCCATTGAAGGCAATGAAAGGCTTTTGGTTTATGAATATATGCCGCTGGGTGCTCT AAGCAGACATCTTTTTCAGTGGAAAAGCTTGAAGTTGGAGCCTTTATCTTGGTCACAGAGGCTTGCAATAGCACTTGATG TTGCTAGAGGGATGGAATACCTTCATGGTCTCGCCCGCGAGACCTTCATCCATCGAGACCTCAAGTCTTCGAATATTCTA TTAGGGGATGATTTTCGCGCAAAAGTTTCTGATTTTGGTCTGGTGAAACTTGCCCCAGATGGTGAGAAGTCCGTGGCAAC AAGGCTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGGTTTGCCTTTTCCTTTAGATTGACCATAGACCTTGA AACAATTGTCAAAGATGATCTTGATAGCATAATAAGTGGCATTAAGAATCAAATCATGATTGTCTCTGCATGTTATCGAT TTAGTTTCTTCGTAGTTGTCAGTTTATTTCAGTTAGGAAGTTCTTAAAATAAAGATATCTGAGAATAAAAAATTAAGTCT GTGATGAAAGATCACTTTTCATTCTCTGTTTATTTTGTGGAAAAGTAAGTTATTTGGATTTTGGCCTTTTCTGTAGTAAC ATGTTCTTTGGCCTTTTCTACATTGTCAGACATTCTCTATTTGTTCAATTGCTAAAGAACACTCCCTTATCAAGCCCCAA GGCAACAAATTGCCTAACATATACTTTTGTACTATATATTCTGCTAAGGGGTGTTCGATCAGAGTGCACAAACACACTGC ATTTAAAGTTAACAAGAAAATGATATCTAATTGTGTGTTTAGTGAATTAAATATTAGTGAACCTGTAAGCAATATGATCG TCGTACCCCCTGCTAATTAGTTCAGACTATTGCATCGTACTGATAAAACTCTGCCTATGCTTGCATAGCTGGTCCTAAAC CCGGGTAAAAGAAGAAGGTTGTGTTAGACTTTCGGCAGCCAACGTGAAACTGACCAATATCTTTAATATGGATCGTTGAT CTGATTGTTGTTGTTGTTGTTTTATTTCTTCCTACTTATAAGATACAGATATGATTACATCTCTACACTTCTTAAAGTCT TCTGGTTTTAAGTTTGATGCATCTTGCTTCCCTTACTAACTAGAAGTTTCTGAGTTTCAGTGATGGGCAAAATCACCACT AAAGTTGATGTGTTCAGCTATGGTGTGGTGTTAATGGAACTTCTGACTGGACTAATGGCTCTTGACGAGAGCCGACCGGA GGAAAGTCAGTACTTGGCACAATGGTTTTGGCAAATCAAATCTAGCAAAGAAACGCTTATGCCTGCGATTGATCCAGCCC TTGAAGCGAGCGAAGAGACTTTCGAGAGTATTTCCATTGTAGCAGAGCTTGCTGGACATTGTACTGCGAGGGAAGCGAGC CATAGGCCGGATATGAGCCACGCCGTCAATGTGCTGGTAGCATTGGTAGAGAAATGGAGGCCAGTTGATGATGAATTTGA TTATGGCTTTGGCATTGACTACAATCAACCACTTCCCCAGATGTTGAAACTTTGGAAGGAAGGAGAAAGCAAAGAATTGA GCCATGCAAGTCTTGAAGACAGTAAGGGGAGCATACCGGCTAAGCCTAATGGTTTTGCAGACTCCTTCACTGCTGCTGAT GCTAGATGATTTGGAGGTAACTACATTGCAATTTATGGGTCTTGTTACATTGTGGTTAAATAAAAAGTTCACTTTTATAC TGGTCATGTCTGTTTTGGCAGCAAAAGGGTACTATTTATTTGTTTCCAATTCGTTGTTTTGGGACTTTAGAGTACTTCAA GGTACTGAGAGAGGTATGAAGATGTAGATAAAGAAATATAAGTTTTATTGTTTTTTTAGTGGCTATATAGAAAAATAAAA ATCTCATCAATGATGTTACATGCTATCTAGGTTATGCAAAGGTTGATTATTTTACCGCGTTGAACTCAATGTGGTGAAAT CTTGTTTTTTCTATCCATATTGAACTTAACGTGGTAAATTCTTTTATTTTTGTTTTTGTATCTTGCAATACGTGGAATTA TGTTTATGTTTGCACTAAACACAAAAACAAACATTCACATTGAGTAATAGCATAACTTTCAAAATTACAAAAATCTATAA CCATGATTTTTCTGGCCGGAGCTGCCTGAATTATTTTCTATGATCA
CDS sequence (LotjaGi3g1v0472000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGGTGTTTTGGTGGAAATTTGCATCTTTCTCTTGTTTTCCATCATGATTGCAATGTGTGGTGGTGATACTAACCC AAATGATCTCAAAATTCTGAATGATTTCAGAAAAGGGTTGAAGAATCCAGAGCTTCTCAAATGGCCAGAGAATGGAGATG ACCCTTGTGGCCCTCCTTCATGGCCTTATGTGTTCTGTTCTGGAGGCAGAGTCACTCAGATTCAGGCTAAGAATTTGGGT CTTCAAGGATCATTGCCTCCAAATTTTAATCAGCTATCAGAGCTCCAAAATTTGGGGCTTCAAAGGAACAACCTTAGTGG GATGCTACCTAGTTTCAGTGGATTATCAAATTTGCAATTTGCTTTCTTGGATTACAATGAGTTTGATGCAATCCCACTTG ATTTCTTCAATGGACTCACCAGCATCACGGTCTTGTCTTTGGAAGAAAACCCATTGAATGCTACTACTGGGTGGTCATTT CCTAAGGACTTAGAGAATTCAGGGCAATTAACCAACCTTTCTCTGGTGAATTGTAATCTGGTTGGAGAACTACCTGATTT TCTGGGCACATTGCCTTATCTCACAAATTTAAGGCTTTCATTCAACAAATTGTCTGGTGGCATTCCAGCTAGTTTTAATC AATCTTCAATCCAGGTTTTGTGGTTGAATGGTCAAGAAGGTGGTGGCATGACAGGTCCTATTGATGTTATTGCTTCCATG ACCTCCCTGAGACAAGCTTGGCTACATGGAAACCAGTTCACTGGGACAATTCCAGAAAACATTGGAAGTTTAACTTCCTT GCAGGAGCTGAACCTGAATAGCAATCAGCTTGTTGGCTTGATTCCTAATACCTTGGCAAATCTGGACCTTAAGATACTAG ATTTAAGTAATAACAGGTTCATGGGTCCAATCCCAAAGTTTAAGGCTGCCAAAGTATCTGATGATTCCAATGTCTTTTGT CAATCTGAGCCTGGGCTTGAATGTGCCCCTCAAGTTACTGCTTTACTGGATTTTCTCCATGATCTGAATTACCCTTCAGT TCTGAGTTCTAAATGGTCTGGTAATGAACCATGTGGAGAGCCATGGTTTGGATTGAGCTGCAACCCCAAATCAGAGGTAA TTATAATCAATTTGCCAAGACAAAAGCTCAATGGAACACTGAGTCCTTCACTTGCTAAGTTAGATTCACTCCATGATATC AGGCTTGCTGGAAACAATATAGTTGGCAAAGTTCCTAGCAATTTTACTGAACTTAAGTCTTTAAAGTTGTTGGATTTAGC TGATAACAATGTTGAACCTCCATTGCCAAAGTTTCGTGATGATGTGAAGGTTATCATTGATGGTAACCCCCTTTTTGCTA AGCTGAGTCCCAAGCCTACTATTAGCCCACCACCTTTAAGTGCATCACCTACAAGTGCACCACCTACAAGTGCACTACCA CCTTCACTGGCACTGCCACCACCGGCACCATCACCTTCCCATATGCCAACTTCTTCTGGTCTGATCCCAAGCCCAAATCA CTCTATCTCTGTCCCATTAAAGCCCCGATCAAATATCTTGCAAAGATCCAAGACAGTAGTGATAGTTGCTGGAGTTGCAA TCTTTGGATTTGTAGCTCTTTTGGTAATTCCTATCATCATGTGTTGCTTGAAGAAGCATAAGTCATCAATGGATGCTCCC AGCTCTGTTGTTGTTCTCACTAAAGATTCATCTGATCCAGAAAAGATGGTTAACTATGCTGTTTCAGATAGCACCATTGG AAGTTTATCAACAAAGACAGGGATAAGTTCTCTGACTAACATAAGCGGGGAAACTGAAAACTCTCATGTAGTTGAGGCTG GTAACCTTGTCATCTCTGTTCATGTTCTACGCAAGGTCACCAAGAATTTTGCTTCAGAAAACGAACTCGGCCGAGGCGGG TTCGGAACAGTTTACAAGGGTGAACTAGAAGATGGGGCCAAAATAGCAGTGAAGAGAATGGAGTGTGGAGCTATTAGCAG TAAAGCAGTGGACGAGTTTCAAGCTGAAATAGCTGTTCTTTCCAAGGTCCGCCACCGGCATTTGGTATCCCTGCTCGGCT ATTCCATTGAAGGCAATGAAAGGCTTTTGGTTTATGAATATATGCCGCTGGGTGCTCTAAGCAGACATCTTTTTCAGTGG AAAAGCTTGAAGTTGGAGCCTTTATCTTGGTCACAGAGGCTTGCAATAGCACTTGATGTTGCTAGAGGGATGGAATACCT TCATGGTCTCGCCCGCGAGACCTTCATCCATCGAGACCTCAAGTCTTCGAATATTCTATTAGGGGATGATTTTCGCGCAA AAGTTTCTGATTTTGGTCTGGTGAAACTTGCCCCAGATGGTGAGAAGTCCGTGGCAACAAGGCTTGCTGGAACATTTGGA TACCTTGCCCCTGAATATGCAGTGATGGGCAAAATCACCACTAAAGTTGATGTGTTCAGCTATGGTGTGGTGTTAATGGA ACTTCTGACTGGACTAATGGCTCTTGACGAGAGCCGACCGGAGGAAAGTCAGTACTTGGCACAATGGTTTTGGCAAATCA AATCTAGCAAAGAAACGCTTATGCCTGCGATTGATCCAGCCCTTGAAGCGAGCGAAGAGACTTTCGAGAGTATTTCCATT GTAGCAGAGCTTGCTGGACATTGTACTGCGAGGGAAGCGAGCCATAGGCCGGATATGAGCCACGCCGTCAATGTGCTGGT AGCATTGGTAGAGAAATGGAGGCCAGTTGATGATGAATTTGATTATGGCTTTGGCATTGACTACAATCAACCACTTCCCC AGATGTTGAAACTTTGGAAGGAAGGAGAAAGCAAAGAATTGAGCCATGCAAGTCTTGAAGACAGTAAGGGGAGCATACCG GCTAAGCCTAATGGTTTTGCAGACTCCTTCACTGCTGCTGATGCTAGATGA
Protein sequence (LotjaGi3g1v0472000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGVLVEICIFLLFSIMIAMCGGDTNPNDLKILNDFRKGLKNPELLKWPENGDDPCGPPSWPYVFCSGGRVTQIQAKNLG LQGSLPPNFNQLSELQNLGLQRNNLSGMLPSFSGLSNLQFAFLDYNEFDAIPLDFFNGLTSITVLSLEENPLNATTGWSF PKDLENSGQLTNLSLVNCNLVGELPDFLGTLPYLTNLRLSFNKLSGGIPASFNQSSIQVLWLNGQEGGGMTGPIDVIASM TSLRQAWLHGNQFTGTIPENIGSLTSLQELNLNSNQLVGLIPNTLANLDLKILDLSNNRFMGPIPKFKAAKVSDDSNVFC QSEPGLECAPQVTALLDFLHDLNYPSVLSSKWSGNEPCGEPWFGLSCNPKSEVIIINLPRQKLNGTLSPSLAKLDSLHDI RLAGNNIVGKVPSNFTELKSLKLLDLADNNVEPPLPKFRDDVKVIIDGNPLFAKLSPKPTISPPPLSASPTSAPPTSALP PSLALPPPAPSPSHMPTSSGLIPSPNHSISVPLKPRSNILQRSKTVVIVAGVAIFGFVALLVIPIIMCCLKKHKSSMDAP SSVVVLTKDSSDPEKMVNYAVSDSTIGSLSTKTGISSLTNISGETENSHVVEAGNLVISVHVLRKVTKNFASENELGRGG FGTVYKGELEDGAKIAVKRMECGAISSKAVDEFQAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSRHLFQW KSLKLEPLSWSQRLAIALDVARGMEYLHGLARETFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGEKSVATRLAGTFG YLAPEYAVMGKITTKVDVFSYGVVLMELLTGLMALDESRPEESQYLAQWFWQIKSSKETLMPAIDPALEASEETFESISI VAELAGHCTAREASHRPDMSHAVNVLVALVEKWRPVDDEFDYGFGIDYNQPLPQMLKLWKEGESKELSHASLEDSKGSIP AKPNGFADSFTAADAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TMHMM | 4 | 23 | 20 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 525 | 502 | - | – | |
| Gene3D | 26 | 325 | 300 | 2.4E-69 | ||
| SUPERFAMILY | 26 | 307 | 282 | 1.7E-40 | – | |
| Pfam | 27 | 67 | 41 | 3.5E-5 | ||
| SMART | 92 | 114 | 23 | 53.0 | ||
| SMART | 115 | 138 | 24 | 38.0 | ||
| PANTHER | 189 | 972 | 784 | 4.7E-247 | – | |
| PANTHER | 189 | 972 | 784 | 4.7E-247 | – | |
| SMART | 264 | 287 | 24 | 1.3 | ||
| SUPERFAMILY | 330 | 437 | 108 | 8.75E-14 | – | |
| Gene3D | 330 | 455 | 126 | 6.3E-24 | ||
| Pfam | 330 | 368 | 39 | 0.0027 | ||
| MobiDBLite | 456 | 507 | 52 | - | – | |
| MobiDBLite | 457 | 494 | 38 | - | – | |
| TMHMM | 525 | 547 | 23 | - | – | |
| Phobius | 526 | 550 | 25 | - | – | |
| Phobius | 551 | 976 | 426 | - | – | |
| Gene3D | 592 | 707 | 116 | 4.5E-32 | – | |
| SUPERFAMILY | 606 | 914 | 309 | 9.31E-75 | ||
| ProSiteProfiles | 630 | 910 | 281 | 37.686 | ||
| SMART | 630 | 907 | 278 | 7.7E-34 | ||
| Pfam | 633 | 904 | 272 | 2.0E-45 | ||
| ProSitePatterns | 636 | 658 | 23 | - | ||
| CDD | 636 | 906 | 271 | 9.49684E-91 | – | |
| Gene3D | 708 | 920 | 213 | 4.5E-52 | – | |
| ProSitePatterns | 755 | 767 | 13 | - | ||
| MobiDBLite | 947 | 976 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0472000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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