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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0046900 |
| Transcript ID | LotjaGi4g1v0046900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT1G11340.1 G-type lectin S-receptor-like Serine/Threonine-kinase; Swiss-Prot: sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1; TrEMBL-Plants: tr|I1KQR8|I1KQR8_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi4g1v0046900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5672278..5677541) extracted from Lotus japonicus Gifu genome v1.2.
GTCCATTCAATGTTTCTACACATACTTAGAAATTTTCACAAAATGCCAATTCACATTCACAACAACTAAGCACGACACAA TGAAGTTACTTTCCTCAAAAGAACTTCTGGGTCCATCTTTTCTGCTCTTGCTGTTGTTCTTCTCCCCTTCGTGCCACTCA CTCGACAGCATTATAACCTCAAACCGACCCATCAAAGACGGCGACGTTTTGGTCTCCGACGACAGAGGAACCTTCGTGCT CGGTTTCTTCAGCCCGCGAGATGATTCAAGAAGCCGGTATGTTGGGATATGGTACAACAAAATCTCAGAACAAACCGTTG TGTGGGTCGCAAACAGAGACACTCCCCTGAAGAACAACGACACTTCTGGTGTTCTCTCCGTCCAAAATGGAAACCTCGTA CTCCACGCCGCCACCATCAAGAACAGAAACGTGAACCCGGTTTGGTCAACCAATGTTTCCACCTCATTTAACGCTTCTTC AGCTAAGCTTCTAGACACAGGGAACTTGGTTTTGTTCAATGGAAACGGTAATGTTTTATGGCAGAGTTTTGATTACCCTG GTAACACTCTGCTTCCGTTCATGAAACTCGGGCTGAACCGTACAACCGGTCTGAACCGGTTCTTGAGATCGTGGAAGTCT CCGGCCGACCCGGGATCCGGAAACGTGACATATAAAATCGACCCGGCGGGGTCCCCACAATTGTACCTGAATAAGAACGG GATCCCTATATGGCGGGTCGGGTCGTGGACGGGTTTGAGATGGAGTGGGGTACCGGAGATGACACCGAGCTTCATCTTCA CCGTTGAATTCATCGATGACAAAGATGAGGTAACGATAATGTACGGAGTGAAGGACCCCACGGTGCTGACGAGGATGGTG TTGGAAGAAACTGGCCACGTGCGGAGGCTGACGTGGCAGGCGCACGAGAACAGGTGGTTCCAAATTTGGTTTGGGCCGAA GGAGGAGTGCGACGGGTTCAGGCAGTGCGGGGCGAACGCGAACTGCGACCCGTACAATGCAGAGCGGTTTGAGTGTGAGT GTTTGCCCGGGTTCGAACCCAGGTTCCCGCGTGAATGGTACCTCAGAGATGGGTCGGGTGGGTGCGTGAGGAAGGGGAAC GTGTCAACGTGCCGGAGCGGGGAGGGGTTTGTGAAGGTGGAGCGTGTGAAGGTTCCGGACACTTCGAAGGCGCGTGTGGA GGAGGGGATGAGGTTGAGAGAGTGCAAAGAGAAGTGTTTAGGGGATTGTTCGTGTGCGGCATACACGACTGCGAATGAGA GCTCACAGAGTGGGTGCCTTACTTGGCATGGAGGTATGGAGGACACGAGGACGTATACGAATGGGGGAGAGGATTTGTAT GTTCGTGTGGATGCACTTGAATTAGGTACTCTCCTTCTTTCTTATTCACAAGGAAAACATATATGTTTGGTTTTAAGTTG AAACTAACTAAAACCCAACGGAGGTCTAAAGTTCCTTTTATGTTTCGCGTGTTATGACTTATAATGCATGTTCTCATCTT TTAGTGCATTGAACGTGGTTTTCAACTAAAACCAAACACACGAGGTCATAACTGTCTTAACATTTGATCATGGTTTTAAA TTGGGTCGCAATTAAATCTAACGAGTTTTGAACACTGATATTGGTGTAACGATTGCACTTGCAGTCACATTACCCGCATT TGTTTATAATTTTGCAATGTCAAGGTTAACCGCGACCGCAAACATAACTAAAATTTAAAACTTATATACTTTATATTTAT ATTAGTTGACTGGACGAGTGAGGGGATGAGAGGAAGTTATTTTTACTTGATAGACCACCTCTATATTTGGATAACAATGA GGGTTTGGTTCAAAAAAGAAGAATGAGGGTCAGTGTTAATTACTTCTGAGGCAAAATTTATACATTTTTTTCGTTCATGT TCATTTGCAATTCATAATAGACACTTTTTCTTTATTTAGATATGGAACTTGCCTTGTTTAACTTTTTTTTTTTGGAACAA GTCTTGTTTAACCTTTAATTTTTGAACTATATTTCATTTATCAAAAATAAATTTTATCTTAGCATTTGCACTTTGCAGCT AGATATGCAAAAAAGCCGTATGGTGCTCTTGGCAAGAAGTGGATGATTGCAGTTTTAGCTGTTGCAATTTCCTTGTTATT ATTTTTGGGCACATTAGTGTATTGGTTTGTAAAGGCCAGGAAACAAGGTATGCCAAACTCTTCTCAAACTTATCGTGTTG GGATTCTTAACTCCATTAACTTGTTCAATTGTTTGATGATAGGGAGAAAAAGAAACCGCAAGTTTTCGTTTCGTCTTAGC TTTGAGGACTCTCCCAATCACCAAGAATTTGACACTACACAAAATACAGATTTACCATTCTTTGATCTTAGCACCATAGC TGCAGCAACAGACAATTTCTCTAACAAGCTTGGTCAAGGTGGTTTTGGTGCTGTTTACAAGGTATGTAAACATTCTTCTT TAACAAGTTCCAAATTGAATAACATTGAGCACCGGTTTAAAGGCATTGTACTGATGTCATCTCCAAAATTTTGTTTTGTC TGCAATTCATAAAAAAAAATCTGGTTCACAAGTTAAAAGAGATTCTCTACAAATTAATTTTAACACAAGGAACATATTGC ACATAACATGTACTAAATACTAGTCGTAAAAACACAGTCCATGGTTGTACCGGTTTTTAACATGGTCCACCGTAGAGTTT TCCTATATTTATAATTCAAAGCAAGTAGCACTAGTTACAGAATTTGCAAGCAAATATTTTTTTTGGTTACATGCAAGCAA ATAATTTGTTTTGCAATAAGGCAAACTGTTATAAGAAGTTTAATTTGGATGATATGTTCAGGGTGTACTGAGTAATGGAA AGGAAATAGCAGTGAAGAGACTGGCAAAGAATTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTTGTTTTGATTTCA AAGCTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTCCATTGAAGGAGAGGAGAAGATGTTGATCTATGAGTATTT GCCTAACAAAAGCTTGGATTTTTTCATTTTTGGTATGTCTAGTTTTTCCTAACCATTTATAGTGACATTTTCATGCATCA AGTTACAGAACAATTGGGCCAACATGTTTCACTCATGAAAACTTGAATTGTTTTGGTGCAGATGAAGCTAAAAGGTCACT GCTAGACTGGGAAAAAAGATTTGACATCATCTGTGGGGTTGCTAGAGGGATCTTGTACCTTCATCAAGATTCACGATTAA GAATCATTCATAGAGACCTGAAGGCCAGCAATGTCTTGCTGGACTCTGCATTGGACCCCAAAATTGCAGATTTTGGCATG GCTAGAATATTTGGTGGAGATCAAATTGAAGCAAACACAAATCGTGTTGTTGGAACCTAGTAAGTACTCGAATATGCAAA CATGTCTTAGTTTCCTTGCATTATGTTACTTGGAATCAGTGCATGTTTGGAAATCCTTCTACAATTGATTCTAAAGCTAA AATCAATCATGGGAAGAAGCTTATGTGAGTAGCTTCTGGATGCTAGAATTGATTCAAACATGCAATCAGACACTAATTCA AAAGTTATTTTAATAGAATATAGCAAGTAGTAATACTTCACTCCTTGAAACCCTTATCTCCTAACTATAGTTGATCACTA GAAATAAGATTTTTAGTGATTTAAATTATGTTTTTGCTCTTGTAGTGGCTACATGTCACCAGAATATGCCATGGAAGGAC AATTTTCAATCAAGTCAGATGTATACAGCTTTGGAGTCTTACTTCTAGAGATTGTTACAGGAAGAAAGAACAGTGGTCAA TATGAAGATATTACAACCACAAATTTAGTTGGACATGTGAGTATCAATATGTATATGAGAAACTACACTCTAGTTTAAAT ATATCCTTTAATAGCCTAATTAATCAAGTAACTTAATTAATGTAGATATGGGATCTATGGAGAGAAGGAAGAGCCTTGGA GATTGTTGATCCATCATTGGGAGAGTCATGCTCTGACCATTTAGTCCTAAGATGCATCCAAATTGGGCTGTTATGTGTGC AGGATCATGCTGGAGATAGGCCTTCTATGTCAAGAGTTGTTTCCATGTTGGACAATGATTCAACTCTTCCTACTCCAAAA CAGCCAGCATTTATTTTCAAGAAATCGAATTATGCGAGTTCAGATGCTTCAACCAGTGAAGGAATTAATTACTCAGTTAA TGAGATGAGTATGACTAGGATTGAAGCTCGCTGAAAGCCAAGGCTCTTGGAATTGTGTGACGAAGCTTTGTATGCTATTG TATGATTCTAGTGTGTTGTGAATTGAACAACACTTAGGTTTGCCAAAATGTTGTCTATGATAACCTACATATTATCCAAT TTAAAATAGCAATGTAAAATCAGGGGTTATTAGGGAGTAAGGCTAAGGCTAATACCAGCATTTGACTTCTTTATGTAAAT TTCTTTTGGTCTTTGACGAGTGTAATTAAACCTGTTTGGGAAACCGGAATAGTCCCTCCCAACATCTTGTTGGTACTTCT TTCTGTAAATTAATAGCAACACTATTCTAAGTATATTTTTGTGTAAGCACAAATAGCAAAACCCAAATAATCATAGTTTC TATTACTGTTACATAATTTTTTTCTCTTTTTTTTTTTCATTTTACATTTCAAAATTACAGTTACTAACTGTAATAACAGA ATGGCTCACTATTTCCTCATAACCTTCAATCCAAAAGCTTCCATGCCACACACAAAACTCAAATATATACCTTAGAATAC CACAGTGCTGCAAACTGATTCTATGATGCATGAGAATGCTGTACTTATATATAAATATACACGTGTTTCTCAAGCATGCT AACCAATTGCAGAGCCGGAGCCTATGCAAATGTGCTACCAAACTCACATTTAATGAAAAAGTATGTACCGGCTACATACT TGAGGTAACGTAAGTTCTACCGAGCATCGATTGTAGTTACTGTTATTTCATTTACTGAAGATCCTCCTCCTGATGATGAC TCTTGCGAATCTCGGTTGCCATTGAATAGAAATGCTGGCTTTTGGGGTCCCCGAAGAGGTGTTTCATTTCCTAGCATGAA AACAACTTCTAACATGGATGGTCTGTTGACAGCATTTTCTTGCACACACAAGAGTCCAATTTGGATGCACCTCAGAACTA CATCAGGAGGATAAGACTGGCCTAGTGTTGAATCAACTATATCCAAGGCCCTTCCTTCTGTCCA
CDS sequence (LotjaGi4g1v0046900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTACTTTCCTCAAAAGAACTTCTGGGTCCATCTTTTCTGCTCTTGCTGTTGTTCTTCTCCCCTTCGTGCCACTC ACTCGACAGCATTATAACCTCAAACCGACCCATCAAAGACGGCGACGTTTTGGTCTCCGACGACAGAGGAACCTTCGTGC TCGGTTTCTTCAGCCCGCGAGATGATTCAAGAAGCCGGTATGTTGGGATATGGTACAACAAAATCTCAGAACAAACCGTT GTGTGGGTCGCAAACAGAGACACTCCCCTGAAGAACAACGACACTTCTGGTGTTCTCTCCGTCCAAAATGGAAACCTCGT ACTCCACGCCGCCACCATCAAGAACAGAAACGTGAACCCGGTTTGGTCAACCAATGTTTCCACCTCATTTAACGCTTCTT CAGCTAAGCTTCTAGACACAGGGAACTTGGTTTTGTTCAATGGAAACGGTAATGTTTTATGGCAGAGTTTTGATTACCCT GGTAACACTCTGCTTCCGTTCATGAAACTCGGGCTGAACCGTACAACCGGTCTGAACCGGTTCTTGAGATCGTGGAAGTC TCCGGCCGACCCGGGATCCGGAAACGTGACATATAAAATCGACCCGGCGGGGTCCCCACAATTGTACCTGAATAAGAACG GGATCCCTATATGGCGGGTCGGGTCGTGGACGGGTTTGAGATGGAGTGGGGTACCGGAGATGACACCGAGCTTCATCTTC ACCGTTGAATTCATCGATGACAAAGATGAGGTAACGATAATGTACGGAGTGAAGGACCCCACGGTGCTGACGAGGATGGT GTTGGAAGAAACTGGCCACGTGCGGAGGCTGACGTGGCAGGCGCACGAGAACAGGTGGTTCCAAATTTGGTTTGGGCCGA AGGAGGAGTGCGACGGGTTCAGGCAGTGCGGGGCGAACGCGAACTGCGACCCGTACAATGCAGAGCGGTTTGAGTGTGAG TGTTTGCCCGGGTTCGAACCCAGGTTCCCGCGTGAATGGTACCTCAGAGATGGGTCGGGTGGGTGCGTGAGGAAGGGGAA CGTGTCAACGTGCCGGAGCGGGGAGGGGTTTGTGAAGGTGGAGCGTGTGAAGGTTCCGGACACTTCGAAGGCGCGTGTGG AGGAGGGGATGAGGTTGAGAGAGTGCAAAGAGAAGTGTTTAGGGGATTGTTCGTGTGCGGCATACACGACTGCGAATGAG AGCTCACAGAGTGGGTGCCTTACTTGGCATGGAGGTATGGAGGACACGAGGACGTATACGAATGGGGGAGAGGATTTGTA TGTTCGTGTGGATGCACTTGAATTAGCTAGATATGCAAAAAAGCCGTATGGTGCTCTTGGCAAGAAGTGGATGATTGCAG TTTTAGCTGTTGCAATTTCCTTGTTATTATTTTTGGGCACATTAGTGTATTGGTTTGTAAAGGCCAGGAAACAAGGTATG CCAAACTCTTCTCAAACTTATCGTGTTGGGATTCTTAACTCCATTAACTTGTTCAATTGTTTGATGATAGGGAGAAAAAG AAACCGCAAGTTTTCGTTTCGTCTTAGCTTTGAGGACTCTCCCAATCACCAAGAATTTGACACTACACAAAATACAGATT TACCATTCTTTGATCTTAGCACCATAGCTGCAGCAACAGACAATTTCTCTAACAAGCTTGGTCAAGGTGGTTTTGGTGCT GTTTACAAGGGTGTACTGAGTAATGGAAAGGAAATAGCAGTGAAGAGACTGGCAAAGAATTCTGGACAAGGCATAGAAGA GTTTAAAAATGAGGTTGTTTTGATTTCAAAGCTCCAACACAGAAATCTTGTGAGGATCTTAGGTTGCTCCATTGAAGGAG AGGAGAAGATGTTGATCTATGAGTATTTGCCTAACAAAAGCTTGGATTTTTTCATTTTTGATGAAGCTAAAAGGTCACTG CTAGACTGGGAAAAAAGATTTGACATCATCTGTGGGGTTGCTAGAGGGATCTTGTACCTTCATCAAGATTCACGATTAAG AATCATTCATAGAGACCTGAAGGCCAGCAATGTCTTGCTGGACTCTGCATTGGACCCCAAAATTGCAGATTTTGGCATGG CTAGAATATTTGGTGGAGATCAAATTGAAGCAAACACAAATCGTGTTGTTGGAACCTATGGCTACATGTCACCAGAATAT GCCATGGAAGGACAATTTTCAATCAAGTCAGATGTATACAGCTTTGGAGTCTTACTTCTAGAGATTGTTACAGGAAGAAA GAACAGTGGTCAATATGAAGATATTACAACCACAAATTTAGTTGGACATATATGGGATCTATGGAGAGAAGGAAGAGCCT TGGAGATTGTTGATCCATCATTGGGAGAGTCATGCTCTGACCATTTAGTCCTAAGATGCATCCAAATTGGGCTGTTATGT GTGCAGGATCATGCTGGAGATAGGCCTTCTATGTCAAGAGTTGTTTCCATGTTGGACAATGATTCAACTCTTCCTACTCC AAAACAGCCAGCATTTATTTTCAAGAAATCGAATTATGCGAGTTCAGATGCTTCAACCAGTGAAGGAATTAATTACTCAG TTAATGAGATGAGTATGACTAGGATTGAAGCTCGCTGA
Protein sequence (LotjaGi4g1v0046900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLLSSKELLGPSFLLLLLFFSPSCHSLDSIITSNRPIKDGDVLVSDDRGTFVLGFFSPRDDSRSRYVGIWYNKISEQTV VWVANRDTPLKNNDTSGVLSVQNGNLVLHAATIKNRNVNPVWSTNVSTSFNASSAKLLDTGNLVLFNGNGNVLWQSFDYP GNTLLPFMKLGLNRTTGLNRFLRSWKSPADPGSGNVTYKIDPAGSPQLYLNKNGIPIWRVGSWTGLRWSGVPEMTPSFIF TVEFIDDKDEVTIMYGVKDPTVLTRMVLEETGHVRRLTWQAHENRWFQIWFGPKEECDGFRQCGANANCDPYNAERFECE CLPGFEPRFPREWYLRDGSGGCVRKGNVSTCRSGEGFVKVERVKVPDTSKARVEEGMRLRECKEKCLGDCSCAAYTTANE SSQSGCLTWHGGMEDTRTYTNGGEDLYVRVDALELARYAKKPYGALGKKWMIAVLAVAISLLLFLGTLVYWFVKARKQGM PNSSQTYRVGILNSINLFNCLMIGRKRNRKFSFRLSFEDSPNHQEFDTTQNTDLPFFDLSTIAAATDNFSNKLGQGGFGA VYKGVLSNGKEIAVKRLAKNSGQGIEEFKNEVVLISKLQHRNLVRILGCSIEGEEKMLIYEYLPNKSLDFFIFDEAKRSL LDWEKRFDIICGVARGILYLHQDSRLRIIHRDLKASNVLLDSALDPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEY AMEGQFSIKSDVYSFGVLLLEIVTGRKNSGQYEDITTTNLVGHIWDLWREGRALEIVDPSLGESCSDHLVLRCIQIGLLC VQDHAGDRPSMSRVVSMLDNDSTLPTPKQPAFIFKKSNYASSDASTSEGINYSVNEMSMTRIEAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| PIRSF | 2 | 865 | 864 | 1.8E-279 | ||
| Phobius | 9 | 20 | 12 | - | – | |
| Phobius | 21 | 27 | 7 | - | – | |
| Phobius | 28 | 449 | 422 | - | – | |
| ProSiteProfiles | 29 | 158 | 130 | 18.489 | ||
| Gene3D | 31 | 158 | 128 | 1.5E-14 | ||
| CDD | 35 | 160 | 126 | 1.27573E-33 | ||
| SMART | 35 | 160 | 126 | 6.1E-37 | ||
| SUPERFAMILY | 66 | 223 | 158 | 3.93E-26 | ||
| Pfam | 79 | 186 | 108 | 1.3E-31 | ||
| Pfam | 218 | 328 | 111 | 4.4E-28 | ||
| ProSiteProfiles | 293 | 331 | 39 | 10.226 | ||
| CDD | 349 | 430 | 82 | 1.19073E-21 | – | |
| Pfam | 351 | 415 | 65 | 6.9E-19 | ||
| ProSiteProfiles | 351 | 431 | 81 | 10.449 | ||
| SMART | 352 | 430 | 79 | 1.7E-9 | ||
| Phobius | 450 | 473 | 24 | - | – | |
| TMHMM | 451 | 473 | 23 | - | – | |
| Phobius | 474 | 484 | 11 | - | – | |
| Phobius | 485 | 504 | 20 | - | – | |
| TMHMM | 486 | 505 | 20 | - | – | |
| Phobius | 505 | 865 | 361 | - | – | |
| Gene3D | 522 | 622 | 101 | 1.7E-34 | – | |
| PANTHER | 524 | 857 | 334 | 1.3E-135 | – | |
| PANTHER | 524 | 857 | 334 | 1.3E-135 | – | |
| SUPERFAMILY | 534 | 833 | 300 | 5.88E-79 | ||
| ProSiteProfiles | 547 | 824 | 278 | 36.584 | ||
| SMART | 547 | 811 | 265 | 2.0E-27 | ||
| Pfam | 549 | 817 | 269 | 1.7E-45 | ||
| ProSitePatterns | 553 | 575 | 23 | - | ||
| CDD | 553 | 820 | 268 | 4.21288E-91 | – | |
| Gene3D | 623 | 829 | 207 | 2.8E-58 | – | |
| ProSitePatterns | 668 | 680 | 13 | - | ||
| Pfam | 820 | 865 | 46 | 5.4E-8 | ||
| Coils | 857 | 865 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi4g1v0046900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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