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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0149400 |
| Transcript ID | LotjaGi4g1v0149400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CTP synthase; TAIR: AT1G30820.1 CTP synthase family protein; Swiss-Prot: sp|P70698|PYRG1_MOUSE CTP synthase 1; TrEMBL-Plants: tr|A0A0S3R418|A0A0S3R418_PHAAN CTP synthase; Found in the gene: LotjaGi4g1v0149400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:24401418..24407275) extracted from Lotus japonicus Gifu genome v1.2.
GCCAATCCCATCTTCAACTTTCTTCATACTAGTACTCTTCCACCCTGCGTCTTTGTCATTCAAACTTAACCAAATTAAAG TTCCCCAGAGAGATTCAGTGTTGCTTTTTTATACTCATTCTCTCTTTCTCTCAGTTTGCTCTTTGTGTTTCAGAGTTAAC ACTATATTTTCGCTGTGTTTTACTCTCATTGTGGAGTGTTTGGGGATTAAGGAAGCTTAACAACTAACAAAAATGAAGTA CGTTCTTGTAACTGGAGGAGTTGTTAGTGGCCTCGGCAAAGGTGTCACTGCCAGTAGTATTGGCTTGCTTCTCCAAGCTT GTGGACTCCGAGTCACTGCTATCAAAATTGGTTTGTTCATTTCTTTCTCTTTTTCACCTTTTGGAATAAAGCACACATTC TTTTTATCCTTCAAAACATGAATTTTCAACAGTCTCTGTTTCTCTCTCAAACAACCTCCAGTTAATTTTTTTTGTTTGTC TAGATTTGTTTCTTCTTCTTAGACACAGACCCTTTGGTTTCTTAACTTTACTTAACTCTTCTTCTCGCCTTTGTGGTTTT AGTCTCACATTGACGAGAGATATAATCAAATAAGTCTTTATATATACGGGGTAAACCCATTTTTATCTCCACAATAGCTT TTCTGGTAGAGTTAGGCCTAACACGATTTTTTGACAAAAATCATGCTTATCAGCCCTGTTTCTTCATATCCTATGATGGG TTGCATTCTGATTTTTTGTTTCTTTGTGATTCAGATCCTTACTTGAACACAGATGCTGGAACAATGTCCCCTATTGAGCA TGGAGAAGTTTTTGTGTTGGATGATGGTGGTGAGGTACATACACCACCACTAGCTCTGATTCACTAATTCATCATTTATT TTGATTTTAAGGAAATGCCCAAAAACAATTGAAGGATAAAAATAAAAAAAAATAAACACGTTTTTTGAAGGAGAAAGAAA ATGAGAGAAATTTTTTGTGCCAACTTTATGCAATTTTCTCAGAGATTATCAGAAAATTATATCAAAAGCAGTGCCTTTGG AAAATTGTGAATCTTGACTCTCTTTTTGTCCAAAGGTGGACCTGGATCTTGGAAACTATGAGCGCTTTATGGATATCAAG TTGACCCGTGATAACAACATAACTACTGGGAAAATTTACCAGGCAAGTTCTTTCCTATGACAGATTTTGAAGATCATTAC AAATTAACCAGAAAAAAATAACTCTTCATCTCTAAGACTCTAACTTTAATTTTCATTTTCCTGGTTATCACAACAGTATG TAATTGAGAAGGAGAGAAGAGGAGACTATCTGGGAAAAACTGTCCAGGTCTTGCTGCCAAATCATGTTCTGTGTTTTTTT TTGGATAAATCATGTTATGTGTTTTTGTATGATAATAATTTTTTTTTTCATATTTGGTCCTGATTTATTATTATTTTCAT GTAATTTTCAATTTAGGTTGTCCCTCATATCACTGATGCTATTCAAGAGTGGATAGAGAGGGTGGCCCACATACCGGTTG ATGGAAAAGCAGGTCCAGCTGATGTGTGTGTCATAGAATTAGGTGGAACCATAGGTAAAATAACAACACTTTTGAAAAAT TTCTTCACTTTTCACTTTTTTATGTGAATTTCTAAGAATTTCCCTTGATCTGGATGCAGGGGATATTGAGTCCATGCCAT TTATTCAGGCATTAGGACAATTCTCATACAGAGTTGGTGAGTGAGAATGCTGGATTTGTTGGTAAAGTGTGTTTTTGGTG AATATATGATGTGTAAATATGTTCATTAATTTCATTTTTATGTGATTCTCATTTGCAGGTGCTGGCAACTTTTGTGCAGT TCATGTCAGTCTTGTTCCTGTTTTGAATGTTGTGGGTGAACAGGTAATACCTTGTATGTGTTTGTTTAAATGTCGGGTGA ATGTAAACGGGTGTTTGCTCAATTCAATTCTTCGCATCGGTTGGATTTTATGTCTCCGAATCCGTGTGAATGTACATTGA GGAGTTACAATTCTGAATGCCCTTTGGTGATTTACTTTATGACCTAACATAGAAAATTCTCTTTACAGAAAACAAAACCA ACTCAGCATAGTGTTCGTGGACTAAGAGGTCAAGGGCTGACTCCACATATCTTGGCTTGCCGCAGCACCACGGTTGGTCT CTCTTTGCATGTTTGGAAACACAGTGGAATACCACATTGGAAAAAAATCAGAGTGGACAGAAGCAGCTTCTTTTAGCTCT TATGGCTGTCCACCGTGATTTTGGTTTCAAATGTGCACAAATATGCACTAAGCAAAACATAGGACACTAGCACATAATAA TAGATGCACAAATGAAGATAAATGTATATTTTCTATTGTTTTTAGATACTGTTTTTAATTGTTACTTTTTTAAGTTTGTA TTCTGAAACTCAATTGTTTTTCCAGGTACTTGATGAGAGTGCAAAGGGGAAACTCTCCCAATTTTGCCTAATTCCGGTGA GGATAAGTCTATTTTGCTGTATATGATTTTTAATGAGTGCTTCTGTTTTGCAAGAGTTTTATATCTGAAGCTGCCTATTT CCAGGGTGAAAACATAATTACTCTCTATGATGTTCCTAACATCTGGCACATTCCTTTGCTTTTAAGAGTAAGTTTCATCT CAAACTCCAAACTTCAAATAAAGTTATTTTCAGGTACCCTTTCTTACATCTTATCTTCTTCTGGTCCAGGATCAGAAGGC TCATGAAGCAATATTCAAAGTGCTGAACCTCAAAGGGTAAGTTCACTAACTCACTCTTTATTTGCTCTGTTTTCTGGACT CAACTAAACAGATACAAAGAATTTTCTATCCTTTCTGATTTTTCTGGTAGTCTTAAGTGGCGGTTTGTTGTATGTACAGA ATGACTCAAGAACCAGATTTAAAGGAATGGACTAGGAGAGCTGAATCCTGTGATATGCTTCATGAACCAGTGGGTAGTCC AAAGCAAATCTCAATTTTATTATCCATGATTGTTCATGATAGTTACATATGTTATTGTTCTTTAAACATGGCAGGTTCGT ATAGCCTTGGTGGGGAAATATACATGCCTTTCAGATTCCTATCTCTCTATTCTAAAGGTGGAGCTAGCTTTTACTTTATC TTCAGTATGTCTGAACAATATATTGCTTAATCATAACTGCATAAAATTAAGCTTGACACCTTTAATATTAACTTTCAGGC CTTAGTTCATGCTTCTGTTGGATGGCACCAGAAACTTCTTGTGGACTGGGTTTCAGCTACCGACCTTGAAGAGGAAACCG CAAAAGAGGTTACATCAAATCTTCAATATCATGTTACAATCAAGTTTTATTAAGTATTCTTCATAATAGCAACTTCATCT ATATGTTATTATTAATTGTTGCAGAATCATGATGCTTATAAGGCAGCATGGAAGCTATTAAAGGTTTCACCTATGATCTC AAAATAAAATTCTCTCTTTAGTTCCAAGAACTTGCTATGCTTATTATCTAACTAATATTTTCTTTCAGGGTGCTGATGGT GTTCTTGTTCCTGGAGGCTTTGGAGATAGAGGTGTGCAAGGAAAAATGGTTGCGGTTAAGTATGCTCGTGAAAACAGAAT TCCATTCCTCGGCATTTGTCTTGGAATGCAAATCGCTGTCTTGGAGTTTGCTCGATCTGTTCTTGGAGTACATGATGCTG CTAGCACTGAATTTGATCCGAAAACCAAAAGCCCTTATGTCATATTTATGCCTGAGGTGTGTCTATATTATGAGTTATCT CGTTCTGATGCTAAGAAGATAGTATATCAATCATGTTTCATTTTTTCCCATTTGTGATTCGTTTGAACTGTTTTGTATAG GGATCAAAAACACACATGGGGGGCACCATGCGCCTCGGATCTCGGAGGACTTTTTTCCAGACCAAGGAATGCAAAACTGC AAAATTGTAAGTGTTATTACTCCATTGAATATTTCTGAAGACATTTGTTTTTGTTTTTTATGCAGAGAAATATAAGAGTA ACACTGTAAATGACTTGATATATTATATTTAGCATGAAAATGGATAAACATATACTTTTAGTGGATGAGATTAATTAGGT TTCTGCCTCTCTTAGATATGGCTGCAAAAGCTTCATTGATGAGAGACATCGGCATAGATATGAGGTATATTGCATTGTCA TGCATAAAATTATCATGTGAATTTGAATGGAACGGAAAATGATCTCGCGCATCATATGCAGGTGAATCCTGATGTGGTGG CTCGCCTTGAAAATGCTGGTCTTTCTTTTACTGGGAAGGATGAAACTGGTCAACGCATGGAGGTATAGACATTCTCTTTT CAGTTTTTGAATAAGTACAAACATTAACATGATGTATTTCTGAATTATTGATTTATTGTTTGTGTTTGAATGTTAACAGA TTGTTGAGCTGCCTAATCATCCTTATTTTGTTGGTGTTCAATTCCATCCTGAGTTTAAATCAAGACCAGGAAAACCTTCT CCAGTGTTTTTCGGTAATTTATGTGATAAATTTATGTGTTTTTCATCCAAGTTGACTATACAATTTACTATCTTTTCATA TCTGATCTTCAATGTTCTTTGGTCCTTATTTTCTGTTTGCTTTCCAGTGGAAAATTAGATTATAATAGCTAGATGCTATT TCAACAATCAATTTTCTTATCCATTGAAACCGAGATGATGCATTAGAAAATCCATTGTTCGTCCTTTTATCTTAAATTCC AGCATACAATGTAAAATTTGTTAAGTGTGCCTCAGGATCAAGACAACTATTAATGCAGCTCACTCCACCATTAATCATTT CTAAAGACATAAAACAGGGGGAAAAATAATTATTTGATTTTATCCATATGAACTTTGCTTTTCATACATTTCACTTTCAC TAGCTACATCATCAAACACAAAGAAAACAACATTATCCATATAGTGTTTTGGTTCTGGATGCATTTTCTAGTCAATGCGA TGCAATTGTATATATATTAAGTTTTTGGTTATCAATGAATTGAAAGTTTATTATATAGAGGGTTATTTGGCCATGTCTAG TCAATATGAGACTTCTCAACAAATTTATAATAGGATAACAAACAATTTTTTGATTCTGTTATGCAGCTTTTGATTACTTA ATTATCATGTCAATGCAGGGTTTATTGGAGCAGCATGTGGAAAACTGGATGCTGTACATCACTATTCAAATGGAGTAGGA AATGATATATCAGCAGCAGCCAAAACATACCAGAATGGAACTCCAACAAAACCAGCTTTTAGAGCAGAATATGCAAATGG AAATTGCAATGGCAATGGCAATGGATTGCATTACTAAATGTTACTGCTCTTGTTGCTTCTTCATCTTAGTAGTGTTGAGG AGGGATTTCAGTTTGTCTATGAAACTTGTCTGTACAGTGAAATTGAACCTTGGTGGTAGGTATAGAGGTTTCAGTGAGGA GATACAGAGAAAGAGCTTGGGCCCGGTCTTTTTTATGGGCTAAGCTCTTTTTAAGTTTATAATGTTTTCAGAGTGGAGAA ACTCACAAGGTTTCTTTGTCTTTTATATGTTTCAATCCAATGCTACCTCTTGGCTTTTGCAAAGACATGATGGTGATTTA TAGAGAAATTATTGTGGACTTGTGTTTCTTTTATAAACTCTATAAGTATAATTTCCATGTGTTGGCGCATAACCTAATAT GCACCACTTTTTAGTGGTGTAACTTTGCACCACTATGTTAATTGTCCATTTTACCTCTGTTCAAAAAATTAATCCCATCA AAATCCACCCGGTAATACCAATATTTTTTTCTTTTTATAAAATAATTTTTTTTAACAGGGGTAAAATTGACAATTGGTAT AGTGGTGCAAGGTTGCAC
CDS sequence (LotjaGi4g1v0149400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTACGTTCTTGTAACTGGAGGAGTTGTTAGTGGCCTCGGCAAAGGTGTCACTGCCAGTAGTATTGGCTTGCTTCT CCAAGCTTGTGGACTCCGAGTCACTGCTATCAAAATTGATCCTTACTTGAACACAGATGCTGGAACAATGTCCCCTATTG AGCATGGAGAAGTTTTTGTGTTGGATGATGGTGGTGAGGTGGACCTGGATCTTGGAAACTATGAGCGCTTTATGGATATC AAGTTGACCCGTGATAACAACATAACTACTGGGAAAATTTACCAGTATGTAATTGAGAAGGAGAGAAGAGGAGACTATCT GGGAAAAACTGTCCAGGTTGTCCCTCATATCACTGATGCTATTCAAGAGTGGATAGAGAGGGTGGCCCACATACCGGTTG ATGGAAAAGCAGGTCCAGCTGATGTGTGTGTCATAGAATTAGGTGGAACCATAGGGGATATTGAGTCCATGCCATTTATT CAGGCATTAGGACAATTCTCATACAGAGTTGGTGCTGGCAACTTTTGTGCAGTTCATGTCAGTCTTGTTCCTGTTTTGAA TGTTGTGGGTGAACAGAAAACAAAACCAACTCAGCATAGTGTTCGTGGACTAAGAGGTCAAGGGCTGACTCCACATATCT TGGCTTGCCGCAGCACCACGGTACTTGATGAGAGTGCAAAGGGGAAACTCTCCCAATTTTGCCTAATTCCGGGTGAAAAC ATAATTACTCTCTATGATGTTCCTAACATCTGGCACATTCCTTTGCTTTTAAGAGATCAGAAGGCTCATGAAGCAATATT CAAAGTGCTGAACCTCAAAGGAATGACTCAAGAACCAGATTTAAAGGAATGGACTAGGAGAGCTGAATCCTGTGATATGC TTCATGAACCAGTTCGTATAGCCTTGGTGGGGAAATATACATGCCTTTCAGATTCCTATCTCTCTATTCTAAAGGCCTTA GTTCATGCTTCTGTTGGATGGCACCAGAAACTTCTTGTGGACTGGGTTTCAGCTACCGACCTTGAAGAGGAAACCGCAAA AGAGAATCATGATGCTTATAAGGCAGCATGGAAGCTATTAAAGGGTGCTGATGGTGTTCTTGTTCCTGGAGGCTTTGGAG ATAGAGGTGTGCAAGGAAAAATGGTTGCGGTTAAGTATGCTCGTGAAAACAGAATTCCATTCCTCGGCATTTGTCTTGGA ATGCAAATCGCTGTCTTGGAGTTTGCTCGATCTGTTCTTGGAGTACATGATGCTGCTAGCACTGAATTTGATCCGAAAAC CAAAAGCCCTTATGTCATATTTATGCCTGAGGGATCAAAAACACACATGGGGGGCACCATGCGCCTCGGATCTCGGAGGA CTTTTTTCCAGACCAAGGAATGCAAAACTGCAAAATTATATGGCTGCAAAAGCTTCATTGATGAGAGACATCGGCATAGA TATGAGGTGAATCCTGATGTGGTGGCTCGCCTTGAAAATGCTGGTCTTTCTTTTACTGGGAAGGATGAAACTGGTCAACG CATGGAGATTGTTGAGCTGCCTAATCATCCTTATTTTGTTGGTGTTCAATTCCATCCTGAGTTTAAATCAAGACCAGGAA AACCTTCTCCAGTGTTTTTCGGGTTTATTGGAGCAGCATGTGGAAAACTGGATGCTGTACATCACTATTCAAATGGAGTA GGAAATGATATATCAGCAGCAGCCAAAACATACCAGAATGGAACTCCAACAAAACCAGCTTTTAGAGCAGAATATGCAAA TGGAAATTGCAATGGCAATGGCAATGGATTGCATTACTAA
Protein sequence (LotjaGi4g1v0149400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKYVLVTGGVVSGLGKGVTASSIGLLLQACGLRVTAIKIDPYLNTDAGTMSPIEHGEVFVLDDGGEVDLDLGNYERFMDI KLTRDNNITTGKIYQYVIEKERRGDYLGKTVQVVPHITDAIQEWIERVAHIPVDGKAGPADVCVIELGGTIGDIESMPFI QALGQFSYRVGAGNFCAVHVSLVPVLNVVGEQKTKPTQHSVRGLRGQGLTPHILACRSTTVLDESAKGKLSQFCLIPGEN IITLYDVPNIWHIPLLLRDQKAHEAIFKVLNLKGMTQEPDLKEWTRRAESCDMLHEPVRIALVGKYTCLSDSYLSILKAL VHASVGWHQKLLVDWVSATDLEEETAKENHDAYKAAWKLLKGADGVLVPGGFGDRGVQGKMVAVKYARENRIPFLGICLG MQIAVLEFARSVLGVHDAASTEFDPKTKSPYVIFMPEGSKTHMGGTMRLGSRRTFFQTKECKTAKLYGCKSFIDERHRHR YEVNPDVVARLENAGLSFTGKDETGQRMEIVELPNHPYFVGVQFHPEFKSRPGKPSPVFFGFIGAACGKLDAVHHYSNGV GNDISAAAKTYQNGTPTKPAFRAEYANGNCNGNGNGLHY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 578 | 578 | 0.0 | – | |
| SUPERFAMILY | 1 | 272 | 272 | 3.54E-118 | ||
| TIGRFAM | 1 | 545 | 545 | 9.1E-224 | ||
| Hamap | 1 | 550 | 550 | 45.216 | ||
| PANTHER | 1 | 578 | 578 | 0.0 | ||
| Phobius | 1 | 3 | 3 | - | – | |
| Gene3D | 1 | 292 | 292 | 1.3E-141 | – | |
| ProSiteProfiles | 1 | 30 | 30 | 5.0 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| CDD | 2 | 268 | 267 | 0.0 | – | |
| Pfam | 2 | 272 | 271 | 3.1E-121 | ||
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 599 | 579 | - | – | |
| Gene3D | 295 | 557 | 263 | 2.7E-113 | ||
| SUPERFAMILY | 297 | 548 | 252 | 1.62E-70 | ||
| CDD | 298 | 543 | 246 | 9.1117E-136 | ||
| ProSiteProfiles | 299 | 552 | 254 | 23.73 | ||
| Pfam | 309 | 543 | 235 | 5.3E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | CTP synthase activity | Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP. | ||
| Biological process | Pyrimidine nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. | ||
| Biological process | CTP biosynthetic process | The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate. |
Expression pattern of LotjaGi4g1v0149400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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