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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0231900 |
| Transcript ID | LotjaGi4g1v0231900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family; TAIR: AT4G20140.1 Leucine-rich repeat transmembrane protein kinase; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|A0A0R0F9Q1|A0A0R0F9Q1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0231900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:54311129..54314092) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAACTCATATCTTTCAGACATTCTGCAATGGGTTCCATTTGGATGTGCCATTTCTTTCTGTCATTGGCCATACTTGG TGAAACTGCTTCTGTTGCAACTCTTACGAATGATTCAACAGATTCCTACTGGCTTCTCAAGATTAAATCAGAACTTGCAG ATCCACTAGGAGCCCTGAGAAACTGGTCTCCAACAAATCATTTCTGCAGCTGGAGTGGAGTAACATGTGCAGTTGATCAG GAACATGTTATAGGCCTGAATTTGTCAGGCTCAGGAATATCAGGTTCCATTTCAGTTGAATTCAGTCACCTCATTTCTAT TCAAACACTTGATTTGTCTTCAAATTCCCTTAATGGCTCCATCCCTTTAGAGCTTGGGAACCTTAAAAATCTAAGAACAC TGCTGCTGTACTCAAATTACCTCTCTGGCAACATTCCTGCAGAGATAGGTAATTTGAAGAGCTTGCAAGTTCTTAGAATT GGAGACAACATGTTCACAGGTGAAATCACACCTAGCATCTTCAACATGAGCAAGTTGACAGTGTTGGGTCTTGGCTACTG CAACTTCAATGGAAGCATACCTTCTGGGATTGGGGAGTTGAAGCATCTAACATCTCTTGATTTGCAAATGAACAGTCTGA GTGGCCCCATACCTGAAGAGATTCAAGGCTGTGAAGAGCTTCAAAACATAGCAGCATCAAACAACATGCTTGAAGGAGAC ATACCCTCCTCTCTGGGGTCTCTTAAATCATTGAAAATTCTGAATCTTGCCAATAACTCTCTATCTGGATCAATTCCTAA AGCCTTGAGTCATCTTTCCAACTTGACATACCTGAATTTGGTTGGAAACAAACTAAATGGAGAAATTCCTTCAGAGCTTA ATAGCGTGACTCAGCTGCAGAAGCTAGACTTGTCTAGAAACAATCTTTCTGGATCAATACCCCTTCTCAATAGCAAATTG CAGAATCTTGAAACTCTGGTTCTGTCTGATAATGCTTTCACAGGTAGCATTCCAAGCAACTTCTGCTTCAGAGGCTCAAA GCTTCAGCAATTTTTCTTGGCTAGAAACATGCTCTCTGGAAAATTTCCCTTGGAGGTTCTCAACTGCAACTCAATCCAAC AGTTGGATCTTTCTGACAATAGCTTTGATGGAGAACTTCCTTCCAGCATAGACAAACTACAGAATCTCACAGATCTTGTG CTCAACAACAACAGCTTTGTTGGATCATTACCTCCTGAAATTGGAAATCTTAGTAACCTGGAAGGTCTTTTCCTGTTTGG TAACTTTTTCAAAGGTGAAATCCCAGTGGAGATTGGAAGGCTGCAAAGATTGAACACCATTTACCTCTATGATAACCAGA TGTCTGGACTCATACCAAGAGAGTTAACAAACTGCACAAGCTTAAGGGAAGTGGACTTTTTTGGAAATCATTTTTCAGGG CCCATTCCAGAGACTATAGGTAAGTTGAAGGACTTGGTTGTTCTTCATTTGAGGCAGAATGACTTGTCTGGCCCCATCCC TCCAAGCATGGGGTACTGTAGAAGTCTTCAAATCTTGGCCTTAGCAGATAACAGGTTATCAGGTTCCATTCCACCCACAT TCAGTTACCTTTCAGAACTTAGTAAGATTACCCTTTACAACAACTCCTTTGAAGGACCTCTTCCTCAATCACTCTCTTCT CTAAAAAACCTCAAAATCATAGATTTTTCCCACAACAAGTTCAGTGGAAGTTTCTCTCCACTCACTAATTCAAATTCCCT CACTTTTCTGGACTTGACTAACAACAGCTTCTCAGGTCCTATCCCTTCTACTCTACCCAACTCCAAAAATCTCCACCGTC TCCGACTCGCGTACAACAATCTCACGGGAACCATTCCTTCTGAATTTGGCCAGCTTACTGAGCTCAACTTTCTTGATTTA TCATTCAACAATTTAACAGGAGCTGTGCCACCCCAACTCTCAAACTCTCAGAAAATACAACACATGCTACTCAGCAATAA CAGATTGACTGGGAAAATTCCAAATTGGTTGGGAAGCTTACAAGAACTTGGTGAGCTAGACCTCTCTTACAATAACTTCA GTGGGAAGGTACCTTCTGAGCTTGGTAACTGCTCAAAATTACTCAAGCTTTCTCTCCTCCACAACAATCTCTCTGGTGAA ATTCCCCAAGAGATTGGAAACCTCACTTCTCTCAATGTCTTCAATGTGCAAAAAAATAGTCTCTCTGGCTTCATTCCTTC AACAATTCAGCATTGCACCAAGCTCTATGAGCTCAGGCTCTCAGAAAATTTCTTAACAGGTAATATACCAGGCGAGCTAG GAGGGCTTGCTGAGTTGCAAGTCATATTGGACCTGAGTAAAAACCTCTTCTCCGGCGAGATTCCACCATCTCTTGGAAAC CTCATGAAGCTAGAAAGACTGAACCTATCCTTCAATCAACTTCAAGGAGCATTTCCTCATTCACTTGGCAGGCTCACTAG CCTGCATGCGCTGAATCTCTCAAATAACCATCTTGAAGGCCAGATTCCTTCAACCTTTTCAAGGTTCCCACTAAGCTCAT TCCTCAACAATGACAAATTGTGCGGCAGACCATTAGTGTTGTGCTCAGAATCGCGAGGGAAGAAGATGCAGCTGTCAAAC ACGCAAGTGGTAGCAATCATTGTGGCCATTGTGTTTACCTCCACTGTGATATGCTTACTTATGCTGTATACCATGCTCAG AATCTGGTGCAACTGGAAAAAAGTTGCGATTTCAAGTGCGGAGGGTCATGGTGGTGGTGCTTTTGGTCACAAGAGAGAGG AGGGTAGATGGGTCTGTGGTGATCAGAAGACAAGGAAAGGAGAGTACTGGAACATGAGTAATTCCTTTGGGTTCATTCCT TCACCAGATAAGCAGAATTCAGAAACAAAAACAACTAGCTTCTTCAATATCAAAATGGAAGGCATGGAAAATACAAATAT ATAG
CDS sequence (LotjaGi4g1v0231900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAACTCATATCTTTCAGACATTCTGCAATGGGTTCCATTTGGATGTGCCATTTCTTTCTGTCATTGGCCATACTTGG TGAAACTGCTTCTGTTGCAACTCTTACGAATGATTCAACAGATTCCTACTGGCTTCTCAAGATTAAATCAGAACTTGCAG ATCCACTAGGAGCCCTGAGAAACTGGTCTCCAACAAATCATTTCTGCAGCTGGAGTGGAGTAACATGTGCAGTTGATCAG GAACATGTTATAGGCCTGAATTTGTCAGGCTCAGGAATATCAGGTTCCATTTCAGTTGAATTCAGTCACCTCATTTCTAT TCAAACACTTGATTTGTCTTCAAATTCCCTTAATGGCTCCATCCCTTTAGAGCTTGGGAACCTTAAAAATCTAAGAACAC TGCTGCTGTACTCAAATTACCTCTCTGGCAACATTCCTGCAGAGATAGGTAATTTGAAGAGCTTGCAAGTTCTTAGAATT GGAGACAACATGTTCACAGGTGAAATCACACCTAGCATCTTCAACATGAGCAAGTTGACAGTGTTGGGTCTTGGCTACTG CAACTTCAATGGAAGCATACCTTCTGGGATTGGGGAGTTGAAGCATCTAACATCTCTTGATTTGCAAATGAACAGTCTGA GTGGCCCCATACCTGAAGAGATTCAAGGCTGTGAAGAGCTTCAAAACATAGCAGCATCAAACAACATGCTTGAAGGAGAC ATACCCTCCTCTCTGGGGTCTCTTAAATCATTGAAAATTCTGAATCTTGCCAATAACTCTCTATCTGGATCAATTCCTAA AGCCTTGAGTCATCTTTCCAACTTGACATACCTGAATTTGGTTGGAAACAAACTAAATGGAGAAATTCCTTCAGAGCTTA ATAGCGTGACTCAGCTGCAGAAGCTAGACTTGTCTAGAAACAATCTTTCTGGATCAATACCCCTTCTCAATAGCAAATTG CAGAATCTTGAAACTCTGGTTCTGTCTGATAATGCTTTCACAGGTAGCATTCCAAGCAACTTCTGCTTCAGAGGCTCAAA GCTTCAGCAATTTTTCTTGGCTAGAAACATGCTCTCTGGAAAATTTCCCTTGGAGGTTCTCAACTGCAACTCAATCCAAC AGTTGGATCTTTCTGACAATAGCTTTGATGGAGAACTTCCTTCCAGCATAGACAAACTACAGAATCTCACAGATCTTGTG CTCAACAACAACAGCTTTGTTGGATCATTACCTCCTGAAATTGGAAATCTTAGTAACCTGGAAGGTCTTTTCCTGTTTGG TAACTTTTTCAAAGGTGAAATCCCAGTGGAGATTGGAAGGCTGCAAAGATTGAACACCATTTACCTCTATGATAACCAGA TGTCTGGACTCATACCAAGAGAGTTAACAAACTGCACAAGCTTAAGGGAAGTGGACTTTTTTGGAAATCATTTTTCAGGG CCCATTCCAGAGACTATAGGTAAGTTGAAGGACTTGGTTGTTCTTCATTTGAGGCAGAATGACTTGTCTGGCCCCATCCC TCCAAGCATGGGGTACTGTAGAAGTCTTCAAATCTTGGCCTTAGCAGATAACAGGTTATCAGGTTCCATTCCACCCACAT TCAGTTACCTTTCAGAACTTAGTAAGATTACCCTTTACAACAACTCCTTTGAAGGACCTCTTCCTCAATCACTCTCTTCT CTAAAAAACCTCAAAATCATAGATTTTTCCCACAACAAGTTCAGTGGAAGTTTCTCTCCACTCACTAATTCAAATTCCCT CACTTTTCTGGACTTGACTAACAACAGCTTCTCAGGTCCTATCCCTTCTACTCTACCCAACTCCAAAAATCTCCACCGTC TCCGACTCGCGTACAACAATCTCACGGGAACCATTCCTTCTGAATTTGGCCAGCTTACTGAGCTCAACTTTCTTGATTTA TCATTCAACAATTTAACAGGAGCTGTGCCACCCCAACTCTCAAACTCTCAGAAAATACAACACATGCTACTCAGCAATAA CAGATTGACTGGGAAAATTCCAAATTGGTTGGGAAGCTTACAAGAACTTGGTGAGCTAGACCTCTCTTACAATAACTTCA GTGGGAAGGTACCTTCTGAGCTTGGTAACTGCTCAAAATTACTCAAGCTTTCTCTCCTCCACAACAATCTCTCTGGTGAA ATTCCCCAAGAGATTGGAAACCTCACTTCTCTCAATGTCTTCAATGTGCAAAAAAATAGTCTCTCTGGCTTCATTCCTTC AACAATTCAGCATTGCACCAAGCTCTATGAGCTCAGGCTCTCAGAAAATTTCTTAACAGGTAATATACCAGGCGAGCTAG GAGGGCTTGCTGAGTTGCAAGTCATATTGGACCTGAGTAAAAACCTCTTCTCCGGCGAGATTCCACCATCTCTTGGAAAC CTCATGAAGCTAGAAAGACTGAACCTATCCTTCAATCAACTTCAAGGAGCATTTCCTCATTCACTTGGCAGGCTCACTAG CCTGCATGCGCTGAATCTCTCAAATAACCATCTTGAAGGCCAGATTCCTTCAACCTTTTCAAGGTTCCCACTAAGCTCAT TCCTCAACAATGACAAATTGTGCGGCAGACCATTAGTGTTGTGCTCAGAATCGCGAGGGAAGAAGATGCAGCTGTCAAAC ACGCAAGTGGTAGCAATCATTGTGGCCATTGTGTTTACCTCCACTGTGATATGCTTACTTATGCTGTATACCATGCTCAG AATCTGGTGCAACTGGAAAAAAGTTGCGATTTCAAGTGCGGAGGGTCATGGTGGTGGTGACAAGGAAAGGAGAGTACTGG AACATGAGTAA
Protein sequence (LotjaGi4g1v0231900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKLISFRHSAMGSIWMCHFFLSLAILGETASVATLTNDSTDSYWLLKIKSELADPLGALRNWSPTNHFCSWSGVTCAVDQ EHVIGLNLSGSGISGSISVEFSHLISIQTLDLSSNSLNGSIPLELGNLKNLRTLLLYSNYLSGNIPAEIGNLKSLQVLRI GDNMFTGEITPSIFNMSKLTVLGLGYCNFNGSIPSGIGELKHLTSLDLQMNSLSGPIPEEIQGCEELQNIAASNNMLEGD IPSSLGSLKSLKILNLANNSLSGSIPKALSHLSNLTYLNLVGNKLNGEIPSELNSVTQLQKLDLSRNNLSGSIPLLNSKL QNLETLVLSDNAFTGSIPSNFCFRGSKLQQFFLARNMLSGKFPLEVLNCNSIQQLDLSDNSFDGELPSSIDKLQNLTDLV LNNNSFVGSLPPEIGNLSNLEGLFLFGNFFKGEIPVEIGRLQRLNTIYLYDNQMSGLIPRELTNCTSLREVDFFGNHFSG PIPETIGKLKDLVVLHLRQNDLSGPIPPSMGYCRSLQILALADNRLSGSIPPTFSYLSELSKITLYNNSFEGPLPQSLSS LKNLKIIDFSHNKFSGSFSPLTNSNSLTFLDLTNNSFSGPIPSTLPNSKNLHRLRLAYNNLTGTIPSEFGQLTELNFLDL SFNNLTGAVPPQLSNSQKIQHMLLSNNRLTGKIPNWLGSLQELGELDLSYNNFSGKVPSELGNCSKLLKLSLLHNNLSGE IPQEIGNLTSLNVFNVQKNSLSGFIPSTIQHCTKLYELRLSENFLTGNIPGELGGLAELQVILDLSKNLFSGEIPPSLGN LMKLERLNLSFNQLQGAFPHSLGRLTSLHALNLSNNHLEGQIPSTFSRFPLSSFLNNDKLCGRPLVLCSESRGKKMQLSN TQVVAIIVAIVFTSTVICLLMLYTMLRIWCNWKKVAISSAEGHGGGDKERRVLEHE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 32 | 32 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| Phobius | 17 | 27 | 11 | - | – | |
| Phobius | 28 | 32 | 5 | - | – | |
| PANTHER | 32 | 90 | 59 | 2.3E-256 | – | |
| PANTHER | 32 | 90 | 59 | 2.3E-256 | – | |
| Phobius | 33 | 882 | 850 | - | – | |
| Gene3D | 33 | 194 | 162 | 9.9E-50 | ||
| Pfam | 40 | 76 | 37 | 1.3E-10 | ||
| SUPERFAMILY | 86 | 406 | 321 | 5.81E-64 | – | |
| PANTHER | 93 | 270 | 178 | 2.3E-256 | – | |
| PANTHER | 93 | 270 | 178 | 2.3E-256 | – | |
| SMART | 104 | 128 | 25 | 110.0 | ||
| ProSiteProfiles | 106 | 129 | 24 | 6.149 | ||
| ProSiteProfiles | 130 | 152 | 23 | 5.587 | ||
| SMART | 152 | 176 | 25 | 150.0 | ||
| PANTHER | 178 | 294 | 117 | 2.3E-256 | – | |
| PANTHER | 178 | 294 | 117 | 2.3E-256 | – | |
| Gene3D | 195 | 291 | 97 | 1.5E-31 | ||
| SMART | 200 | 223 | 24 | 120.0 | ||
| SMART | 200 | 226 | 27 | 130.0 | – | |
| ProSiteProfiles | 202 | 223 | 22 | 4.978 | ||
| Pfam | 227 | 285 | 59 | 7.3E-9 | ||
| SMART | 248 | 271 | 24 | 23.0 | ||
| ProSiteProfiles | 250 | 273 | 24 | 6.803 | ||
| PANTHER | 271 | 438 | 168 | 2.3E-256 | – | |
| PANTHER | 271 | 438 | 168 | 2.3E-256 | – | |
| SMART | 272 | 295 | 24 | 210.0 | – | |
| SMART | 272 | 295 | 24 | 190.0 | ||
| ProSiteProfiles | 274 | 296 | 23 | 6.434 | ||
| Gene3D | 292 | 385 | 94 | 4.3E-24 | ||
| SMART | 296 | 325 | 30 | 55.0 | – | |
| SMART | 296 | 319 | 24 | 140.0 | ||
| Pfam | 297 | 337 | 41 | 3.6E-6 | ||
| ProSiteProfiles | 298 | 320 | 23 | 7.389 | ||
| PRINTS | 299 | 312 | 14 | 1.6E-5 | – | |
| SMART | 320 | 345 | 26 | 61.0 | ||
| ProSiteProfiles | 322 | 344 | 23 | 5.802 | ||
| ProSiteProfiles | 347 | 368 | 22 | 4.662 | ||
| ProSiteProfiles | 371 | 393 | 23 | 4.971 | ||
| SUPERFAMILY | 375 | 694 | 320 | 1.49E-66 | – | |
| Gene3D | 386 | 482 | 97 | 6.8E-31 | ||
| SMART | 393 | 417 | 25 | 32.0 | ||
| ProSiteProfiles | 395 | 417 | 23 | 4.971 | ||
| PANTHER | 433 | 607 | 175 | 2.3E-256 | – | |
| PANTHER | 433 | 607 | 175 | 2.3E-256 | – | |
| Gene3D | 483 | 582 | 100 | 2.0E-29 | ||
| SMART | 489 | 513 | 25 | 230.0 | ||
| ProSiteProfiles | 491 | 513 | 23 | 4.616 | ||
| Pfam | 514 | 574 | 61 | 1.2E-6 | ||
| ProSiteProfiles | 515 | 537 | 23 | 5.902 | ||
| SMART | 561 | 583 | 23 | 39.0 | – | |
| ProSiteProfiles | 563 | 585 | 23 | 5.856 | ||
| Gene3D | 583 | 657 | 75 | 1.1E-20 | ||
| PANTHER | 584 | 712 | 129 | 2.3E-256 | – | |
| PANTHER | 584 | 712 | 129 | 2.3E-256 | – | |
| Pfam | 586 | 645 | 60 | 2.6E-6 | ||
| ProSiteProfiles | 586 | 606 | 21 | 5.024 | ||
| ProSiteProfiles | 610 | 632 | 23 | 5.702 | ||
| PANTHER | 610 | 770 | 161 | 2.3E-256 | – | |
| PANTHER | 610 | 770 | 161 | 2.3E-256 | – | |
| SMART | 632 | 658 | 27 | 380.0 | – | |
| SMART | 632 | 656 | 25 | 25.0 | ||
| ProSiteProfiles | 634 | 655 | 22 | 5.279 | ||
| ProSiteProfiles | 658 | 681 | 24 | 5.232 | ||
| Gene3D | 658 | 877 | 220 | 9.3E-67 | ||
| SUPERFAMILY | 661 | 856 | 196 | 9.18E-43 | – | |
| SMART | 680 | 704 | 25 | 36.0 | ||
| ProSiteProfiles | 682 | 704 | 23 | 5.402 | ||
| PANTHER | 692 | 848 | 157 | 2.3E-256 | – | |
| PANTHER | 692 | 848 | 157 | 2.3E-256 | – | |
| ProSiteProfiles | 706 | 728 | 23 | 5.379 | ||
| SMART | 728 | 751 | 24 | 290.0 | ||
| ProSiteProfiles | 754 | 776 | 23 | 5.017 | ||
| SMART | 801 | 820 | 20 | 180.0 | ||
| Pfam | 801 | 816 | 16 | 1.9 | ||
| ProSiteProfiles | 803 | 826 | 24 | 5.332 | ||
| SMART | 825 | 848 | 24 | 40.0 | ||
| PRINTS | 825 | 838 | 14 | 1.6E-5 | – | |
| ProSiteProfiles | 827 | 848 | 22 | 6.026 | ||
| Pfam | 827 | 848 | 22 | 1.0 | ||
| Phobius | 883 | 906 | 24 | - | – | |
| TMHMM | 884 | 906 | 23 | - | – | |
| Phobius | 907 | 936 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0231900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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