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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0253800 |
| Transcript ID | LotjaGi4g1v0253800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone clpb, putative; TAIR: AT1G74310.1 heat shock protein 101; Swiss-Prot: sp|P42730|CLPB1_ARATH Chaperone protein ClpB1; TrEMBL-Plants: tr|A0A1J7I0F2|A0A1J7I0F2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0253800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:60778852..60783093) extracted from Lotus japonicus Gifu genome v1.2.
AAGACCTGAAAGGACGAGAAACAGAAACGAACGGAGAAGTCTAGTAGCTTCTGGACTTGTGGCGCATTCACTGAGAAACC TCGAGAAACATTCAGACGCATCGTCTCCGTTAACAAATACAAGCACCTCTCGTTTCCACTCTCACCGCTTCAATCAAACA ACGCACAAATCTTCATTCTCACACCGCCATCACTCACTCGTTTGCTTTCCTGGTACCCTTTTCTCGCTAGCAAGACCTTT CATCTTTCACAAACAAAGGTACGTCAAACTCTGTTCTAGCGTATAGGCTTGCTCTGTTTTGGTGGATTTTTATTTTCATT ATCATTGCAATGCATGATTCATAGCGTGTAGTCTTTATCTCTGTGAAACTTCATCGATTCTTAGTACAATCGATTACGGT TGCGGTGTGATATTGAATTGCGAAAACAGAACAGTGACACAGTTTTTTTGGGTTTAGAATTTGGATAGAAAAAAATGGAT TTTAACTAGATGGGGTTCTTAGATTTTCCGTTTTCTCATCTGGGTCATGTCTGAAAAATTCTGGGTTGTGCTTTTTTTTT CAGAAATTGACGATTTTCTGATAAAGTTTCAATTTTTATTTTTCATGCAGTTTTGGAAATGAATCCTGACAAATTCACCC ACAAGACAAATGAAGCTCTTGCTGGGGCTCATGAACTGGCAATGAGTTCTGGACATGCTCAGATGACTCCTCTGCACCTA GCAAGCACCTTGATTTCTGACCCTAATGGCATTTTCTTCCAAGCAATTTCCAATTCCAGTGGAGAAGAATCTGCACGTGC TGTGGAGAGGGTTTTGAACCAGGCTTTGAAGAAGTTACCTTCTCAGTCCCCTCCTCCTGATGAGATTCCGGCGAGCACGA CGCTTATTAAGGCCATTCGGAGAGCACAGGCGGCGCAGAAGTCCAGGGGTGATACACATTTAGCAGTGGATCAGTTGATT TTGGGCATTCTTGAGGATTCTCAAATTGGTGACTTGTTGAAGGAAGCTGGTGTGGCTGCTGCTAAGGTTAAATCAGAGCT TGACAAGCTTCGTGGGAAGGTAGGGAAGAAGGTTGAGAGTGCATCTGGTGATACTACTTTTCAGGCTTTGAAGACTTATG GGAGAGACCTTGTGGAGCAAGCAGGGAAGCTTGATCCAGTTATTGGGCGTGATGAGGAGATAAGAAGGGTTGTGAGGATT TTGTCAAGGAGGACTAAGAATAACCCGGTTCTGATTGGAGAGCCTGGTGTTGGTAAAACTGCTGTGGTGGAAGGCTTGGC ACAGAGGATTGTTAGAGGGGATGTTCCCAGCAATCTTTCTGATGTTAGGCTTATTGCATTGGACATGGGTGCTTTGGTTG CTGGTGCTAAGTATAGGGGAGAATTTGAGGAGAGGTTGAAGGCAGTTTTGAAAGAAGTGGAGGAGGCTGAGGGGAAAGTT ATTCTGTTCATTGATGAAATTCATCTGGTTCTTGGTGCTGGTAGGACTGAAGGATCGATGGATGCTGCCAACCTTTTTAA GCCTATGCTTGCTCGCGGCCAGCTTAAGTGTATCGGTGCCACAACGCTCGAGGAGTATAGGAAGTATGTGGAGAAGGATG CAGCATTTGAAAGGAGGTTCCAACAGGTTTATGTGGCTGAACCTAGTGTGCCTGACACCATTAGCATCCTTCGTGGACTA AAAGAGAGGTATGAAGGTCATCATGGTGTTCGGATTCTGGACCGTGCTCTTGTTGTGGCAGCTCAATTGTCTAGTCGGTA CATTACAGGTATGCATTGCATTCTTTTCTCTTGGATGTGCTTGTCTTTTCCACCTTTCTCCTTTATGGAAACTTAATGAT TTCATTGATTGTTCTTCTAATGTAATGAAATTGTGTTTTCTTTGTTCAGGGCGTCATCTTCCTGATAAGGCAATTGATTT AGTTGATGAGGCTTGTGCAAATGTGAGAGTTCAACTTGATAGCCAGCCTGAGGAAATTGATAACCTTGAAAGGAAGAGAA TGCAGTTGGAAGTTGAACTTCATGCTTTGGAGAAAGAGAAGGACAAAGCTAGTAAAGCTCGCCTTGTAGATGTAAGTATT AGTCTGTTATGTTTAGTTCTTCAATTGATGTTTTCTACTCATATCTATTTTTGGCTTATTTCAATGGTTCTAAATTTTGT TGCCATGTGCAGGTGAGGAGAGAACTTGATGACTTGAGAGACAAGCTTCAACCTCTGATGATGAAGTATAGAAAAGAGAA GGAGAGGGTTGATGAGATTCGAAGGCTCAAGCAGAAAAGAGAAGAGCTTCTCTTTGCTGCACAAGAGGCTGAAAGACGAT ACGATCTAGCCAGAGCTGCTGACCTGCGATATGGTGCAATTCAAGAGGTGGAATCTGCAATTCAGCAGCTCGAAGGGAGC ACTGATCAGGAGAACTTAATGTTGACAGAAACTGTTGGTCCAGATCAAATATCTGAGGTTGTGAGCCGCTGGACCGGTAT TCCAGTGACAAGGCTTGGCCAAAATGAGAAAGAAAGGTTGATTGGACTTGGTGATAGACTGCACAACAGAGTTGTAGGGC AAGACCAGGCTGTTAATGCTGTTGCTGAGGCTGTATTGAGATCAAGAGCTGGACTCGGGAGACCTCAACAACCAACTGGT TCATTCCTGTTTTTGGGTCCAACTGGTGTTGGCAAAACTGAACTTGCAAAGGCTCTTGCTGAGCAACTGTTTGATGATGA AAACCAGTTGGTGAGGATTGACATGTCTGAATACATGGAACAGCATTCTGTCTCAAGACTGATTGGTGCACCACCAGGGT AAGTGTTGGTAATCAATTTAAGCTAGTTATTATTTATTCGCGTGTAAGAACAAAACGTAACTTCCTGTATTGAATTTCAG GTATGTTGGACATGAGGAAGGTGGTCAGTTAACTGAAGCAGTGAGGCGTAGGCCTTACAGTGTGGTACTTTTTGATGAAG TGGAAAAGGCACACACATCTGTTTTCAATACACTTCTTCAAGTTTTGGATGATGGAAGATTAACTGATGGGCAAGGCCGT ACTGTGGACTTCAGAAACACTGTCGTTATCATGACCTCAAACCTTGGAGCAGAGCACCTCCTAAGTGGACTTTCAGGAAA ATGTTCCATGCAAGTTGCTCGTGATAAAGTAATGCAGGAGGTATGTTTTAAATCCAAGATAACAAACCATGATAACTGAT CTATGTTACTTGTGGCCATTGCTTACACTGATGCATTCTTTTTTTATAACTCTTTCACAGGTGAGAAAGCATTTTAGGCC AGAATTGTTGAATCGGCTTGATGAGATTGTAGTGTTTGATCCTCTTTCACATGAGCAATTGAGGAAGGTTGCAAGGTTAC AAATGAAGGAGGTTGCTAGTAGACTTGCTGAGAGAGGAATAGCCATGGCAGTAACAGATGCAGCATTAGATTATATACTT GCTGAGAGCTATGATCCTGTAAGTGTCATTTTAACATCTCAATTGCTATGCTACATAGTAAAAAATGTTATTAGATAGTA ACTAACAATTTCCTGTTGGTTGCAGGTTTATGGTGCTAGACCAATTAGGAGGTGGCTTGAGAGGAAAGTGGTGACAGAGC TTTCCAGAATGCTTATAAGGGATGAAATTGATGAGAACTCAACAGTGTACATCGATGCTGGCACCAAGGGTAGTGAGTTG GTCTACCGTGTAGAGAAGAATGGTGGGCTGGTTAATGCTGCAACTGGTCAGAAGTCTGATATCTTGATTCAGATACCTAA TGGACCAAAAAGTGATGCTGCTCAAGCTGTGAAGAAGATGAGGATTGAGGAAATTGATGATGGTGAGATGGAAGAGTGAA TTTTGTGACAACTGTAATTAGGTTTGATGAATGGAGTGTCTCTCAAGTATTTGCTCCTTGTAAACCTGTTTTTTTGTCTG TTTTTCTAAGTGGTTGTGATGGAAGAATGAGAATCTAATGTAATAGCTGTCTTTTCTTTAAGCAATAAATTTTGTTGCTG TACAAAGTATTACTACCTGTTTTCTGTCACATAATTCCATATTAGAATTTAGGAAGGCGACATTGATGGCCAGTTAAATG CTACTGGCAGTTACTGTTTGTTCTGCTGTTGCAGATTCAGCCTTGGCCTTTTGTTTTGTATACATCTCTCTGATTAATTA CATACCAGGGAACTGGTTTTCTTCCTGGCTATTTCCACTTTGCAGCCAAATTCCCATGTTCAAAAGCAGCACAAAGCCAA GA
CDS sequence (LotjaGi4g1v0253800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCTGACAAATTCACCCACAAGACAAATGAAGCTCTTGCTGGGGCTCATGAACTGGCAATGAGTTCTGGACATGC TCAGATGACTCCTCTGCACCTAGCAAGCACCTTGATTTCTGACCCTAATGGCATTTTCTTCCAAGCAATTTCCAATTCCA GTGGAGAAGAATCTGCACGTGCTGTGGAGAGGGTTTTGAACCAGGCTTTGAAGAAGTTACCTTCTCAGTCCCCTCCTCCT GATGAGATTCCGGCGAGCACGACGCTTATTAAGGCCATTCGGAGAGCACAGGCGGCGCAGAAGTCCAGGGGTGATACACA TTTAGCAGTGGATCAGTTGATTTTGGGCATTCTTGAGGATTCTCAAATTGGTGACTTGTTGAAGGAAGCTGGTGTGGCTG CTGCTAAGGTTAAATCAGAGCTTGACAAGCTTCGTGGGAAGGTAGGGAAGAAGGTTGAGAGTGCATCTGGTGATACTACT TTTCAGGCTTTGAAGACTTATGGGAGAGACCTTGTGGAGCAAGCAGGGAAGCTTGATCCAGTTATTGGGCGTGATGAGGA GATAAGAAGGGTTGTGAGGATTTTGTCAAGGAGGACTAAGAATAACCCGGTTCTGATTGGAGAGCCTGGTGTTGGTAAAA CTGCTGTGGTGGAAGGCTTGGCACAGAGGATTGTTAGAGGGGATGTTCCCAGCAATCTTTCTGATGTTAGGCTTATTGCA TTGGACATGGGTGCTTTGGTTGCTGGTGCTAAGTATAGGGGAGAATTTGAGGAGAGGTTGAAGGCAGTTTTGAAAGAAGT GGAGGAGGCTGAGGGGAAAGTTATTCTGTTCATTGATGAAATTCATCTGGTTCTTGGTGCTGGTAGGACTGAAGGATCGA TGGATGCTGCCAACCTTTTTAAGCCTATGCTTGCTCGCGGCCAGCTTAAGTGTATCGGTGCCACAACGCTCGAGGAGTAT AGGAAGTATGTGGAGAAGGATGCAGCATTTGAAAGGAGGTTCCAACAGGTTTATGTGGCTGAACCTAGTGTGCCTGACAC CATTAGCATCCTTCGTGGACTAAAAGAGAGGTATGAAGGTCATCATGGTGTTCGGATTCTGGACCGTGCTCTTGTTGTGG CAGCTCAATTGTCTAGTCGGTACATTACAGGGCGTCATCTTCCTGATAAGGCAATTGATTTAGTTGATGAGGCTTGTGCA AATGTGAGAGTTCAACTTGATAGCCAGCCTGAGGAAATTGATAACCTTGAAAGGAAGAGAATGCAGTTGGAAGTTGAACT TCATGCTTTGGAGAAAGAGAAGGACAAAGCTAGTAAAGCTCGCCTTGTAGATGTGAGGAGAGAACTTGATGACTTGAGAG ACAAGCTTCAACCTCTGATGATGAAGTATAGAAAAGAGAAGGAGAGGGTTGATGAGATTCGAAGGCTCAAGCAGAAAAGA GAAGAGCTTCTCTTTGCTGCACAAGAGGCTGAAAGACGATACGATCTAGCCAGAGCTGCTGACCTGCGATATGGTGCAAT TCAAGAGGTGGAATCTGCAATTCAGCAGCTCGAAGGGAGCACTGATCAGGAGAACTTAATGTTGACAGAAACTGTTGGTC CAGATCAAATATCTGAGGTTGTGAGCCGCTGGACCGGTATTCCAGTGACAAGGCTTGGCCAAAATGAGAAAGAAAGGTTG ATTGGACTTGGTGATAGACTGCACAACAGAGTTGTAGGGCAAGACCAGGCTGTTAATGCTGTTGCTGAGGCTGTATTGAG ATCAAGAGCTGGACTCGGGAGACCTCAACAACCAACTGGTTCATTCCTGTTTTTGGGTCCAACTGGTGTTGGCAAAACTG AACTTGCAAAGGCTCTTGCTGAGCAACTGTTTGATGATGAAAACCAGTTGGTGAGGATTGACATGTCTGAATACATGGAA CAGCATTCTGTCTCAAGACTGATTGGTGCACCACCAGGGTATGTTGGACATGAGGAAGGTGGTCAGTTAACTGAAGCAGT GAGGCGTAGGCCTTACAGTGTGGTACTTTTTGATGAAGTGGAAAAGGCACACACATCTGTTTTCAATACACTTCTTCAAG TTTTGGATGATGGAAGATTAACTGATGGGCAAGGCCGTACTGTGGACTTCAGAAACACTGTCGTTATCATGACCTCAAAC CTTGGAGCAGAGCACCTCCTAAGTGGACTTTCAGGAAAATGTTCCATGCAAGTTGCTCGTGATAAAGTAATGCAGGAGGT GAGAAAGCATTTTAGGCCAGAATTGTTGAATCGGCTTGATGAGATTGTAGTGTTTGATCCTCTTTCACATGAGCAATTGA GGAAGGTTGCAAGGTTACAAATGAAGGAGGTTGCTAGTAGACTTGCTGAGAGAGGAATAGCCATGGCAGTAACAGATGCA GCATTAGATTATATACTTGCTGAGAGCTATGATCCTGTTTATGGTGCTAGACCAATTAGGAGGTGGCTTGAGAGGAAAGT GGTGACAGAGCTTTCCAGAATGCTTATAAGGGATGAAATTGATGAGAACTCAACAGTGTACATCGATGCTGGCACCAAGG GTAGTGAGTTGGTCTACCGTGTAGAGAAGAATGGTGGGCTGGTTAATGCTGCAACTGGTCAGAAGTCTGATATCTTGATT CAGATACCTAATGGACCAAAAAGTGATGCTGCTCAAGCTGTGAAGAAGATGAGGATTGAGGAAATTGATGATGGTGAGAT GGAAGAGTGA
Protein sequence (LotjaGi4g1v0253800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPDKFTHKTNEALAGAHELAMSSGHAQMTPLHLASTLISDPNGIFFQAISNSSGEESARAVERVLNQALKKLPSQSPPP DEIPASTTLIKAIRRAQAAQKSRGDTHLAVDQLILGILEDSQIGDLLKEAGVAAAKVKSELDKLRGKVGKKVESASGDTT FQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLSDVRLIA LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLKCIGATTLEEY RKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEGHHGVRILDRALVVAAQLSSRYITGRHLPDKAIDLVDEACA NVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVDVRRELDDLRDKLQPLMMKYRKEKERVDEIRRLKQKR EELLFAAQEAERRYDLARAADLRYGAIQEVESAIQQLEGSTDQENLMLTETVGPDQISEVVSRWTGIPVTRLGQNEKERL IGLGDRLHNRVVGQDQAVNAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYME QHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVVIMTSN LGAEHLLSGLSGKCSMQVARDKVMQEVRKHFRPELLNRLDEIVVFDPLSHEQLRKVARLQMKEVASRLAERGIAMAVTDA ALDYILAESYDPVYGARPIRRWLERKVVTELSRMLIRDEIDENSTVYIDAGTKGSELVYRVEKNGGLVNAATGQKSDILI QIPNGPKSDAAQAVKKMRIEEIDDGEMEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 902 | 902 | 0.0 | – | |
| PANTHER | 1 | 902 | 902 | 0.0 | – | |
| Gene3D | 3 | 148 | 146 | 1.0E-38 | ||
| ProSiteProfiles | 3 | 147 | 145 | 40.604 | – | |
| SUPERFAMILY | 4 | 158 | 155 | 3.14E-26 | ||
| Pfam | 17 | 55 | 39 | 3.9E-6 | ||
| Pfam | 96 | 146 | 51 | 5.4E-8 | ||
| Gene3D | 149 | 343 | 195 | 6.6E-71 | – | |
| SUPERFAMILY | 160 | 546 | 387 | 1.31E-93 | ||
| CDD | 182 | 337 | 156 | 6.32125E-23 | – | |
| SMART | 199 | 344 | 146 | 2.4E-10 | ||
| Pfam | 204 | 317 | 114 | 1.7E-13 | ||
| Coils | 253 | 273 | 21 | - | – | |
| ProSitePatterns | 295 | 307 | 13 | - | ||
| Gene3D | 344 | 545 | 202 | 3.9E-71 | – | |
| Pfam | 344 | 443 | 100 | 2.9E-35 | ||
| Coils | 406 | 440 | 35 | - | – | |
| Coils | 473 | 493 | 21 | - | – | |
| SUPERFAMILY | 547 | 850 | 304 | 1.53E-83 | ||
| Gene3D | 551 | 767 | 217 | 3.0E-87 | – | |
| CDD | 572 | 767 | 196 | 4.04937E-22 | – | |
| SMART | 598 | 769 | 172 | 3.0E-11 | ||
| Pfam | 598 | 762 | 165 | 5.2E-55 | ||
| PRINTS | 602 | 620 | 19 | 4.0E-41 | ||
| ProSitePatterns | 632 | 650 | 19 | - | ||
| PRINTS | 647 | 665 | 19 | 4.0E-41 | ||
| PRINTS | 676 | 694 | 19 | 4.0E-41 | ||
| PRINTS | 709 | 723 | 15 | 4.0E-41 | ||
| Pfam | 768 | 847 | 80 | 1.0E-22 | ||
| SMART | 768 | 859 | 92 | 4.3E-29 | ||
| Gene3D | 768 | 865 | 98 | 9.4E-28 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein metabolic process | The chemical reactions and pathways involving a protein. Includes protein modification. |
Expression pattern of LotjaGi4g1v0253800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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