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LotjaGi4g1v0376600.1

Overview

Field Value
Gene ID LotjaGi4g1v0376600
Transcript ID LotjaGi4g1v0376600.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Importin-5; TAIR: AT5G19820.1 ARM repeat superfamily protein; Swiss-Prot: sp|O00410|IPO5_HUMAN Importin-5; TrEMBL-Plants: tr|I1KSC8|I1KSC8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0376600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:75562541..75569098) extracted from Lotus japonicus Gifu genome v1.2.

GAGTCAACTCAGCTCCAGCAAGCGCAACTGGCGGCTGTTCTCGGCGCGGATCCATCGCAGTTTGAGAGCCTGATCTCTCA ACTCATGACGGCCTCCAATGAGGAGCGTTCTCAGGCCGAGGCGCTCTTCAATCTCTGCAAACAAACCGATCCTGATACCT TATCCTTGAAGCTCGGCCACCTCCTTAACTCCTCGCCGCTCCAGGAGGCCCGCGCCATGTCCGCCATCCTCCTCCGCAAG CAGCTCACCCGCGATGACTCCTACCTCTGGCCGCGCCTCTCCCCGCAGACGCAATCCACACTGAAATCAATCCTCCTCTC GTCAATTCAAACAGAAAGCACCAAATCCATATCGAAGAAGCTTTGTGATACCATCTCCGAACTCGCCTCCGGTATTCTCC CTGATAACGGATGGCCGGAGCTTCTGCCGTTTATGTTCCAGTGCGTTTCCTCCGATTCGCCTAAGCTTCAGGAGTCCGCG TTTCTGATATTCGCGCAATTGTCGCAGTACATCGGTGAATCGCTCACGCCGCACATCAAGCACCTCCATGATATCTTCCT GCAGTGCCTCACATCCAATGGTGTGAATCCTGATGTTCGAATCGCGGCTCTCAACGCGGTTATCAACTTCATCCAGTGCC TCTCCGGGTCGGCCGAGCGTGACCGGTTCCAGGACTTGCTGCCTGCCATGATGCGGACGCTCACGGAGGCGCTGAATTCC GGCCAGGAGGCTACTGCGCAGGAGGCGCTTGAGTTGCTCATTGAGCTCGCGGGCACGGAGCCGAGGTTTCTCCGGAGGCA GATTGTTGATGTGGTGGGGGCTATGCTTCAGATTGCGGAGGCTGAGTCGTTGGAGGAAGGAACGAGGCATCTGGCAATTG AATTTGTTATTACTCTTGCTGAGGCTAGGGAGCGTGCCCCGGGTATGATGAGGAAGCTGCCACAGTTTATTAGCAGGTTG TTTGCCATTCTCATGAAGATGTTATTGGATGTTGAGGATGATCCTGCTTGGCATAGCGCGGAAGTTGAAGACGAGGATGC TGGTGAAACGAGCAATTATAGTGTTGGACAAGAGTGCTTGGATAGGCTTGCTATATCATTGGGTGGAAATACCATTGTTC CTGTTGCTTCTGAACAATTGCCTGCTTATTTAGCTGCTACTGAGTGGCAGAATCGCCATGCTGCACTAATTGCGCTCGCC CAAATAGCAGAGGGTTGCTCAAAGGTAGTGATGATGCTATTGGAATTCACTGCTGTTGTTGTTGTGCTTTTTTTAATTTT TCCACACAATCATAGCTCCTTTGTTACTAATAGGTTTTGCTGTGCATTGTAAATTGTGATTTTGAGTTTGAATCATTGGT GTACTTATTGCTTCAGGTGATGGTAAAAAATTTGGAGCAAGTGGTGGCTATGGTACTGAACTCATTTCCAGATCAACATC CCCGTGTAAGATGGGCAGCAATCAATGCAATTGGGCAACTCTCCACTGATTTGGGTCCAGATTTGCAAGTTAAATACCAT CAAGGGGTGTTGCCAGCACTAGCTTCTGCCATGGATGATTTTCAAAACCCTCGTGTGCAGGTTAGCTGCCCTTATTAATT TTAATTGGTCTATGGGTTTTCCTACAATGATCAAATGAAAGCATTGGGTTAAGTTAATGATTTAAACTTCAATGGAAAAT GTGAGCAGTTATTGCTATAAAACTTCACACAAATATGAACTATTTAACTGTAACATTGATAACGAGCATTAGTCTGCGTA TGTTATAGTTGGTTGAGGATAGAGTATATGATAATATGGTGTCAGTGTTCAACCTATCAATTGAGTTTTTTAGTCATCTT TGTTTATTTTATTCATCATAGTCTGTCAGATTTGTGAATGTTGTACTTCAAGTTATCTTATTTCAATTAAATATGCTTCA TAGTACAAACGTTTTTGTGATTTGTTTACACAGGCACATGCTGCTTCTGCAGTGCTCAACTTCACTGAGAATTGTACGCC TGATATTTTAACACCATATTTGGATGGAATTGTTAGTAAATTGCTTGTACTCCTTCAGGTATGGTTATGTAATATTATTC TCAATTGTAATGTTATTATGGTCGTTTGGCTTAATCATCATATGATTTCATTTTCCTTCATTTAGTTTTGGATATTTATG TGTTTCAGAATGGTAAGCAAATGGTGCAAGAGGGTGCTTTAACTGCTTTGGCATCAGTTGCTGATTCATCTCAGGTATTC TACACAAAGTTATAATCTGCATTCTTCAGCCTCTATAATTTATTTTCTTCAGATCACTCAATCAATACTATGGCCATCCT CAGGAACACTTCCAAAAATACTATGATGCCGTCATGCCATATCTTAAGGCTATATTGGTGAATGCAACTGATAAGTCTAA CCGTATGCTTCGTGCCAAATCTATGGAGTGCATAAGTTTGGTTGGAATGGCTGTTGGGAAGGAGAAGTTCCGGGCTGATG CTAAACAGGTTGGTAGTTATTGGTTCTGGGTCGAGTTTATTTTCTGTTAAGTACTTCTGTTTCTCTTGTCAGCTAGATCT CTGATCCCCTGCATATTCTGGTTCTTTACTAGGTCATGGAAGTTCTCATGTCCCTGCAAGTATCTCAAATGGAGACCGAT GATCCAACAACAAGTTACATGCTACAGGTAGGCTTTTTATTTTACTGATAGCTTGTACATAAAGTGCCAATTGGACTATG GTCTGTCTCAACAATTTTAATTTGTCACAGGCATGGGCTAGACTCTGCAAGTGTCTAGGACAAGATTTTCTTCCTTACAT GGAATTTGTCATGCCACCATTGATTCAATCTGCTTCACTTAAGCCGGATGTCACAATTACATCAGCAGACTCGGACAATG AAATTGAGGACTCTGATGATGAAAGGTCTCCATTTTAGTCCTTCTCTTCATAAAAGTTTAAACAATTAACAATTATCATT GCATAATGTACCCCATCTATCACACAATTTTGCTGTCATTTTGGTCTTGTATGTTTGCTGATAGTGTTGGCACTAGGGTT TAGGATTTTAATGTTTTGTAGCTCAACTAAATTTTGTATTAGGGTTCCTGTGTTTTACTCTTCCTTTTTTCTTCAAAATC AAATGTTCAAGCCCCCCACATCTGTGCAAACACACATAAAATCCTAATATGCACATAATTATCTACGCTTGCTTCTCTTT GAGTGCTAGTACCAGTTTCATTTAACTGGAGAATCAAAAGTATGCTTTGGTGCATTTTTGGTTTGACAATACAAATCCAA CCATGTTTAATTTGTTCCTTACAGTATGGAGACTATCACTCTCGGGGACAAAAGAATTGGTATCAAGACTAGTGTTCTAG AGGAAAAAGCTACAGCATGCAACATGTTGTGTTGCTATGCTGATGAGCTGAAGGAAGGATTCTTTCCATGGATTGATCAG GTTAGACTTCTGCCACTATTGTACACCTTTACACAATAAGTTTTGTTTTAGTGTTACTCTACAGTTTTTTCTTACCAATA ATTTGTTTGTGATGTAGGTTGCAGGAACTCTAGTTCCGCTCCTTAAATTTTATTTCCATGAGGAGGTTAGAAAAGCAGCT GTTTCAGGTATAAGAAATAATAATGATTATGCCTGTGCATCTTTTTTTTTTATCTGTGATATTTCCTTTGCAGTTTCTTC TGTGCATGTGCCTTATGTCATTCCCCTAACTGTTTCAATTTTTATCATTTCTAATATCTTTAGCAATGCCGGAGCTATTG CGATCTGCGAAGTTAGCTATAGAGAAAGGGCTATCTCAGGGCCGGGATGTGTCCTATTTGAAGTTTTTGACTGACAGTAT CATCCCAGCTCTGGTGGAAGCATTGCATAAGGTAATTGTCATTCAACTTTATCCATTCTTTCATATAGGCCAAAATCAAT CCTTTCTATGTAGTAAGTAACCCACTCGGGTTGGCCTTCCGGTGGGGGGTTTGGGTCGTTGCATAAGGGCTATGACCAAA CCTCATAGGTTCAAAATATAAGCCAACGATTCTTTCTGAGTGCAGCATGTACATTTTTGTTAGTTTACAAGAGCCAGTCC AGGCATGATTAATCTAGGTGATATTCAGGATGCACTTTCCTTGACTTGGCTGTGTTTAACATTGGCATTTTTCTTTCTAA AGTTCTCCCTCCTTCATGCACTTGTAGGAACCTGACACAGAGATCTGCGGAAGTATGTTGGAGTCATTAAATGAATGCTT ACAGGTTTGGCTCTCGAGATAACTTGATCATATATCTTGTGTGTTCGTCAGTTTGTTTACAAAATTAGGGCTGTTGAGTA TACCTTGGCACTGTTTATGCTGATCTTTATTAATAAAAAATAAATTCAATGATGATGCTGTCTGTGGAATCTGTGCAAGG TTCCATTGTTTGTTGGTACTTGGTATGTAGAAACAAAATTTAACAGTTTGATTACGTCCTGATTTATGATTGGTTTGTTA GACGTTTTACATTGTTATTCATTTGAATTACTTACAAACTTTGTCAATCACACTGAAACAACTTCCTGACTCATTAATGC CCGATAATTGGGCGCCCTTCACTTTGTCCTTATTGTGGATTTTCTAGGCTTGTGGATTTTGTTAGGAATTAGGATATGTC AGTGCAAAAATTTGGCACTCCTATACTTGCATGGTGGCTGCTCATTAATTTGTCTTGCACATCAATTTGTTATTGCTTTA TATATGTTCATATTCAACTGCATTTTTTCATCAGGTGAGGTAATTTCTCGTCCATGCAGTCTTCATCTCACTTTGTTCAC TATATTTATTGCTCAGTTTCTTCAATTTCAAGTGCGTTGTTTGCTTTTGTTGATTGTTGTGCATCAGTGGTTAAATAAAT TGTTTTATGAAACGCTTGCAAACAATTAGCTCTTTCTTTTGTATCACCTTCCTTCTGTCTCAGTTGTCTTCATTAGTGCA TTTAGTAAAAATCCATTTTGGATGTGTTCTGATCTTTTTGTTTCGGTTTTTAGATCTCTGGAATGCTTTTGGATGAAAGC CAGGTCCGATCCATTGTTGATGAGATAAAACAGGTGATCACAGCTAGTTCAAGTAGAAAAACAGAGAGAGCTGAGAGGGC CCAAGCTGAAGATTTTGATGCTGAAGAGGTGGAGCTGATTAAGGAGGAAAATGAACAAGAGGAAGAAGTTTTTGATCAAG TTAGTTATTTATACTCATCTAAAATACTATAAACCTTCCTTTAAGTTCAGGTTTATGCAGATCAGCTTTTTGTCACCCTT TTAAACTATTTATACATTGTCTCAGGTGGGTGAGATATTGGGCACCTTGATCAAAACCTTCAAAGCCTCCTTCTTGCCTT TCTTTGATCAACTGTCATCATATTTGACACCTATGTGGGTAAGTTCTTCCAGCAAGTTACCATATCTATATTTCATTAGT TTTTCTATTAATGTTTCATTCTGCTTATTCATTTGGCTGGCCTTTCAGCCTTATCTCTTGTGTGATTCTATATCTATATT TTACTTATTTTCTCAGCTTTAGCTGTTAAATTACAAAGATGAGAAAAAATGTAGATTCTACTAGAATCTGAGTGATATTA CCCTGGCCAAGTCAGGAGGAGAGCGCCACATTATGTAAAGATTTATAGATAAAAACCTGTTGTGCACATGTTTGCATGTA TCTGTGCTTGGCTTCTAGTTCAGTTTTTTTTTCTATGATCTCTGAACCCACATTACTTCATTCTCCATTGGACTTAGCCT GCGAGGATTTCTTCTATTAATTCTTGAAATCATGAAATTATGAAATTTTGTTCAACTGTGACTAAGGTTGCGTGAGTGAC TATTGTTGTGTTTCATTCTGCAATTTGAATGGTTTATTCTCTTGCAACTAGTTGATTTCCGTATCATTCTGCAATTTGAA TGGTTTATTCTCTTGCAAAGTTGATTTCAGTAGGATTTATGCCTGTTGATTACTTTCGAGTCTAATTTTTCTAGAACAAT TAAGACATTTATTTCATGTTTGTAATGTTTAGTTTATTGCTTTGGATATAGGGAAGGGACAAGACTCCAGAAGAAAGAAG GATTGCAATTTGCATTTTTGATGATGTTGCAGAGCAGTGTCGTGAAGCAGCTGTGAAGTAAGTACTTTATTTTGTTATAT TCCCACTTCAGCGTGCAGTGATAGTGATCATTATGTTATCAACTTCATTTTATTACAATGATAATTTAACAGGTATTATG ACACATATCTCCCATTCCTGTTGGAGGCTTGTAATGATGAGACTCCTGATGTCAGACAGGTTAGTATCAGTCATGCTCTG TTGGTTAACACTTTGAATACCATTTTGATTCCTTAAACTGTTTGATGGTTAATGTTGGTATTTTGTCTTTGTGCAGGCGG CTGTATATGGCCTTGGTGTTTGTGCAGAGTTTGGTGGTTCTGTGTTTAAACCTCTGGTTGGAGGTACATCTTGTTTCAAT AATAATAAACTTGGAATAAAGCTGTACAATATTGAATGACATGTTAGTGGCTTATTGCAGAGGCTCTTTCGAGGTTAA 

CDS sequence (LotjaGi4g1v0376600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACGGCCTCCAATGAGGAGCGTTCTCAGGCCGAGGCGCTCTTCAATCTCTGCAAACAAACCGATCCTGATACCTTATC CTTGAAGCTCGGCCACCTCCTTAACTCCTCGCCGCTCCAGGAGGCCCGCGCCATGTCCGCCATCCTCCTCCGCAAGCAGC TCACCCGCGATGACTCCTACCTCTGGCCGCGCCTCTCCCCGCAGACGCAATCCACACTGAAATCAATCCTCCTCTCGTCA ATTCAAACAGAAAGCACCAAATCCATATCGAAGAAGCTTTGTGATACCATCTCCGAACTCGCCTCCGGTATTCTCCCTGA TAACGGATGGCCGGAGCTTCTGCCGTTTATGTTCCAGTGCGTTTCCTCCGATTCGCCTAAGCTTCAGGAGTCCGCGTTTC TGATATTCGCGCAATTGTCGCAGTACATCGGTGAATCGCTCACGCCGCACATCAAGCACCTCCATGATATCTTCCTGCAG TGCCTCACATCCAATGGTGTGAATCCTGATGTTCGAATCGCGGCTCTCAACGCGGTTATCAACTTCATCCAGTGCCTCTC CGGGTCGGCCGAGCGTGACCGGTTCCAGGACTTGCTGCCTGCCATGATGCGGACGCTCACGGAGGCGCTGAATTCCGGCC AGGAGGCTACTGCGCAGGAGGCGCTTGAGTTGCTCATTGAGCTCGCGGGCACGGAGCCGAGGTTTCTCCGGAGGCAGATT GTTGATGTGGTGGGGGCTATGCTTCAGATTGCGGAGGCTGAGTCGTTGGAGGAAGGAACGAGGCATCTGGCAATTGAATT TGTTATTACTCTTGCTGAGGCTAGGGAGCGTGCCCCGGGTATGATGAGGAAGCTGCCACAGTTTATTAGCAGGTTGTTTG CCATTCTCATGAAGATGTTATTGGATGTTGAGGATGATCCTGCTTGGCATAGCGCGGAAGTTGAAGACGAGGATGCTGGT GAAACGAGCAATTATAGTGTTGGACAAGAGTGCTTGGATAGGCTTGCTATATCATTGGGTGGAAATACCATTGTTCCTGT TGCTTCTGAACAATTGCCTGCTTATTTAGCTGCTACTGAGTGGCAGAATCGCCATGCTGCACTAATTGCGCTCGCCCAAA TAGCAGAGGGTTGCTCAAAGGTGATGGTAAAAAATTTGGAGCAAGTGGTGGCTATGGTACTGAACTCATTTCCAGATCAA CATCCCCGTGTAAGATGGGCAGCAATCAATGCAATTGGGCAACTCTCCACTGATTTGGGTCCAGATTTGCAAGTTAAATA CCATCAAGGGGTGTTGCCAGCACTAGCTTCTGCCATGGATGATTTTCAAAACCCTCGTGTGCAGGCACATGCTGCTTCTG CAGTGCTCAACTTCACTGAGAATTGTACGCCTGATATTTTAACACCATATTTGGATGGAATTGTTAGTAAATTGCTTGTA CTCCTTCAGAATGGTAAGCAAATGGTGCAAGAGGGTGCTTTAACTGCTTTGGCATCAGTTGCTGATTCATCTCAGGAACA CTTCCAAAAATACTATGATGCCGTCATGCCATATCTTAAGGCTATATTGGTGAATGCAACTGATAAGTCTAACCGTATGC TTCGTGCCAAATCTATGGAGTGCATAAGTTTGGTTGGAATGGCTGTTGGGAAGGAGAAGTTCCGGGCTGATGCTAAACAG GTCATGGAAGTTCTCATGTCCCTGCAAGTATCTCAAATGGAGACCGATGATCCAACAACAAGTTACATGCTACAGGCATG GGCTAGACTCTGCAAGTGTCTAGGACAAGATTTTCTTCCTTACATGGAATTTGTCATGCCACCATTGATTCAATCTGCTT CACTTAAGCCGGATGTCACAATTACATCAGCAGACTCGGACAATGAAATTGAGGACTCTGATGATGAAAGTATGGAGACT ATCACTCTCGGGGACAAAAGAATTGGTATCAAGACTAGTGTTCTAGAGGAAAAAGCTACAGCATGCAACATGTTGTGTTG CTATGCTGATGAGCTGAAGGAAGGATTCTTTCCATGGATTGATCAGGTTGCAGGAACTCTAGTTCCGCTCCTTAAATTTT ATTTCCATGAGGAGGTTAGAAAAGCAGCTGTTTCAGCAATGCCGGAGCTATTGCGATCTGCGAAGTTAGCTATAGAGAAA GGGCTATCTCAGGGCCGGGATGTGTCCTATTTGAAGTTTTTGACTGACAGTATCATCCCAGCTCTGGTGGAAGCATTGCA TAAGGAACCTGACACAGAGATCTGCGGAAGTATGTTGGAGTCATTAAATGAATGCTTACAGATCTCTGGAATGCTTTTGG ATGAAAGCCAGGTCCGATCCATTGTTGATGAGATAAAACAGGTGATCACAGCTAGTTCAAGTAGAAAAACAGAGAGAGCT GAGAGGGCCCAAGCTGAAGATTTTGATGCTGAAGAGGTGGAGCTGATTAAGGAGGAAAATGAACAAGAGGAAGAAGTTTT TGATCAAGTGGGTGAGATATTGGGCACCTTGATCAAAACCTTCAAAGCCTCCTTCTTGCCTTTCTTTGATCAACTGTCAT CATATTTGACACCTATGTGGGGAAGGGACAAGACTCCAGAAGAAAGAAGGATTGCAATTTGCATTTTTGATGATGTTGCA GAGCAGTGTCGTGAAGCAGCTGTGAAGTATTATGACACATATCTCCCATTCCTGTTGGAGGCTTGTAATGATGAGACTCC TGATGTCAGACAGGCGGCTGTATATGGCCTTGGTGTTTGTAGGCTCTTTCGAGGTTAA 

Protein sequence (LotjaGi4g1v0376600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTASNEERSQAEALFNLCKQTDPDTLSLKLGHLLNSSPLQEARAMSAILLRKQLTRDDSYLWPRLSPQTQSTLKSILLSS IQTESTKSISKKLCDTISELASGILPDNGWPELLPFMFQCVSSDSPKLQESAFLIFAQLSQYIGESLTPHIKHLHDIFLQ CLTSNGVNPDVRIAALNAVINFIQCLSGSAERDRFQDLLPAMMRTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQI VDVVGAMLQIAEAESLEEGTRHLAIEFVITLAEARERAPGMMRKLPQFISRLFAILMKMLLDVEDDPAWHSAEVEDEDAG ETSNYSVGQECLDRLAISLGGNTIVPVASEQLPAYLAATEWQNRHAALIALAQIAEGCSKVMVKNLEQVVAMVLNSFPDQ HPRVRWAAINAIGQLSTDLGPDLQVKYHQGVLPALASAMDDFQNPRVQAHAASAVLNFTENCTPDILTPYLDGIVSKLLV LLQNGKQMVQEGALTALASVADSSQEHFQKYYDAVMPYLKAILVNATDKSNRMLRAKSMECISLVGMAVGKEKFRADAKQ VMEVLMSLQVSQMETDDPTTSYMLQAWARLCKCLGQDFLPYMEFVMPPLIQSASLKPDVTITSADSDNEIEDSDDESMET ITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAGTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLAIEK GLSQGRDVSYLKFLTDSIIPALVEALHKEPDTEICGSMLESLNECLQISGMLLDESQVRSIVDEIKQVITASSSRKTERA ERAQAEDFDAEEVELIKEENEQEEEVFDQVGEILGTLIKTFKASFLPFFDQLSSYLTPMWGRDKTPEERRIAICIFDDVA EQCREAAVKYYDTYLPFLLEACNDETPDVRQAAVYGLGVCRLFRG 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 921 921 0.0
PANTHER 1 921 921 0.0
SUPERFAMILY 4 921 918 1.17E-139
SMART 11 83 73 0.0045
Pfam 255 346 92 1.8E-21
SMART 338 575 238 7.7E-13
Pfam 354 454 101 1.9E-8
ProSiteProfiles 389 427 39 9.225
Coils 805 825 21 -
ProSiteProfiles 894 925 32 9.056
Pfam 895 918 24 7.7E-5

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Biological process Protein import into nucleus The directed movement of a protein from the cytoplasm to the nucleus.
Biological process Intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
Molecular function Ran GTPase binding Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0376600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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