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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0050200 |
| Transcript ID | LotjaGi6g1v0050200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc finger CCCH domain protein; TAIR: AT5G63700.1 zinc ion binding / DNA binding protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|K7LRF3|K7LRF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0050200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9010514..9019090) extracted from Lotus japonicus Gifu genome v1.2.
TCTGATCACACCAATTCTTCACTCTATACTCTTCACCCTCCACTCTTGGCTTTTCATGCCCCAAAACACAGACCTCTTTT TCCTCTGCGTCTGGTTCGAAACACAACACTGCGATCATCACTCACTCACTCACCTCAAAGTGTAATGCATTGTTAACTGA GCTTCCATTTTTGGTGTATTTGATTCTATCTGGTAAATGGGTTCTTCTTTCTTTCCCTGATTTTGGTTTTCTCCAACTGC ATTGTGCAGAATTAGGTTTGGGCTGCTTCGTTTTGTTTGTGTATTTCCCGAAACAAGATGGTCAGAACGAAGAACAAGAG AAAGAAGGAAGAGATGGCTGAGGATTGGTGCTTTGCGTGCAAGGATGGAGGGCTCATGAGGGTCTGCGATTATAGGTAAC TTCAGAATCATGAATGCATGTTGTTTTTGTTTCATAAAATGGGTATTGCTTTTTCAGTTGAGTGCTTTTTCTTCTGGGAG TGGTTTCAATTCGGTTGTGAAGGTTCATCAATGGTCATTTCTGTTAAAGGAGCAATTTTTTTGCAGGACACGGTTGGGAA TTGAGATGAACGAGTACTGAATTCCTAGAATATTTTTTTGATGTGCTATGATCAGTTTTTTTCTTCATTGTTGGTCACAG ATTAATTTGTAATGAAAAGAGCACTTAAAATCTTTTTTTTTTTAATTTTTTTTCTTCATTAATAAGCTTTTTCATTCATT TTGATTTGCTACATAAGATTCTGTTTGTGCATAAATTCATTTTGAGGTACTGAGGTAGGAGCATAAATATTGGCATATGT TTGTGTGCTGCTTCAATAAATGGTTGCAGTCCTTTCGTGCTTGTTTGCTATTTTATTGTATGTGCTTGGCCTTGCAAAAA GTGGATAATTCTCTGAGGTAGCTTTAACAAGGGAAATGCTATAGGAGTATAGGGCATGAAAGATTGAAGAGACGAATTTC ACTGCTAGTCATATTATGAGTTGAATGGAAATCAGAGAGGCATTATTGGAAAATATAACTGTTGTTGAATTGAAAATCAA TGGTGAAAAATGATTCGTGAGATTCGTCTAGAAACATTTCAGGCCATATATGATTTCCCCTTTAACAAAGTTGCTGGTAC TTTGGATTATTTTTTTGGTCGATCAAGGTGTGGCTTACTTTGAAATTTCTGTAAATTTGTTCGAGGAAAGCTTGGTGATC ATTCACTATCACTAGTACGATTGTGAAATTGTGATGCATCTGGATTTGGGTCATACATATTACATAGATATAGTTTGTCC TGTGAGTACTTTCTTTTTGATACTTAATTAATTCATGTTGCTTAAAGGGATTGTCTTAAAGCTTATCATCCTCGTTGCGT GGGAAAGGATGATTCCTTTTTGGAGAATGACAGTTACTGGAGTTGTGGTAAGCTACTTCAACCTATCACTCTACCATTAT TGCAAGGCATTCAAATACCTTTTCTTTTTTTGGCATAGTGCATATTTCTAAAATTGATACCATGCTGCCAATTGATTGAG CATCTTATATAATTCTGGGAATTATGGTCAGATGCCCCAGTTTTCCTCTTAAACACACTATAACTGAAACTGGATATCTT GGTTATCGAAAATTTTCCTGAATAGTTGGTATTTTATCAGTCTTCAACTTAGAGATTTGAGATTTCATGTTTTATATGAT CTATATTTATTTTTCTGGAAATGTGAAAGAACTATTTGCTGGAATTGGCAGCCTTGAAGAAAATTTAGTGCATGTGTTGC TTGTCAGTTGTCATGATTAAAAATCAGTTTTTCTCTGTTTTTTTGTGAGTTCATGTTTTAGATATTTGGGCAAAATCTCT TATAATTCTTTTGATACTGATTACTTTCTAATAAATTATTTTTTGCAGCTTCACATTCTTGCTACCATTGCGGCAAAACA TCTAAGTTTAGATGCTTATGCTGCCCAAGTGCTGTTTGTAGGGAATGCATCTATGTCGCTGAAATTGCTGTTGTCAAAGG GAACAAGGGATTTTGCCATAACTGCACAAAACTTGCATATTTATTTGAAGAAAAGGCTGATGCTGATTCTGATGGGGTAA CATTGTTTTCACTCATTTGTTATATGCTACAAGTGGAAAAAAAATGTGCATCAGTATTTGAAATGCATTTGCATTCCTTT CACTTATACGAATTGACAAAATCTAGAAACCTGAAATTCTTGTAAATTCAAACTAAGAAATTATAGTGAATGCAATATAA TGTTGGATTCTGATGAATGGGAAAATTTCACTCACATGACTGAATAAATTTTCAATGTAAGCCAAGTTGTAGAATCTTAC CTAATTAAACAATAACCAAGTGATTTTTTTTTCTCATTGATCTTAGAAAATAAATTGTTGCTTTCTTTTTCCCTTTGTTG GAAACTTGGAATCAAGTAAGGAAATTTATATCGTGGGCTTATAATCAATTTTTTTATTAACAGGGAAATGTAGATTTCAA AGACCGAGAGACATATGAGTGCTTATTCTCAGAATATTATGAAATTATTAAAAAAGAAGAAGGGCTGAATTCTGAACATG TACACTCTGCCCGGAACTTCTTGAAGAATAGCAAAAACAGGAGTGATTTGGATCTAGATGAAATAGATGAAGAGGAAGAT AATAGTGGAGAATCTGATGTAAGTGACTATGAAGTTTCTGATTGTGATGACCTGAATGACAGAGATGGAGTTAAACCAGC CAGGAAAAAGAAGCGCACGGACAAGCTTAAATCAATAAAAGGAAAGGTGAAAGATAAGAAAAAAGAGTTTATTGGATGGG GTTCAAGAAGTCTCATAGAATTTCTTAAATATACTGGTAGTGACACGAGCAGAGAGTTATCTGAATATGAAGTTGCTTCG ATAATTACTAAGTACTGCAATGAAAACAATCTTTTTGACCCCCAGAAAAAAAGAAAGATAATTTGTGATCAACAACTAAG ATCTTTACTGGGGAGGAAATCAGTGACCAAAAACAGTATACAAAACCTTCTGGCACCACATTTTGCAGAGAATATTGAAG AAATGGATGATGTCATGGATGATGTTTCTAATAGTTCAGAAGATAGGGATGATAATGAGCCATTGAAAAATTCGAGGCAG AGGAAATCAATCTCAAATGTCAAATCTTGTCAGAAGGTAGGTTCTGAAAAGGCTCAGAGCTGCCTTGCAGCCATAGTTAG TTCAAACCTCAAACTTGTCTACTTAAAGCGGAGCTTAATGGAGGAGCTTTTGAAGCAACCGGAAACTTTTGATGGCAAAG TGTTTGGAAGTTTTGTAAGAATAAAGTCTGACCCGAATGACTTCTTACAGAAGAATTCTCATCTGCTCTTACAAGTAGTA GGTAATCTTTGTGATGGCTAGAAGTTAATGGTCATTAAAAATTAACCATATGAATGTCTTTTATGGAAGTATAGAAGTTT ATTTTGCTGGCTGCAAATGGTTTTCAAGTACTATAATGATAGTTTAATACTTTCATTGATGATCTTATTTCTAAAATGTT ATTAAGAGTTCCTGACAAGCATTGAAGGAATGAAGAACTGAAGTATGTTGCAGCCTTTAGTAAGATATCCGAATTCAAGG AAGAAAAATGAAAATTAAAAAAACAGTAGCTATTGAAACAAAAAAATTGTAATGAAATAAAATTATAAATGCCTTTAAAC TTTTTACCCATGAAGCAGACTGTTACTTTTTCTTCTGATTGATTAGTATTAGTGTTCATACGGTATATTTAATAGATCAA TTAGATTATCACACATCAACTTTATCTTCTGCACCATAATTTTGCGCAAATTATTTTTAAAAGAATTAATTGATCTTGTG TGTAATTTTGAAAGTAAGTTGCTTTAATTGGTAGACAACTAAGTCATGCATTGTACCTATAGCACATATCTGAAAAAGGA AAATGATCTATAAAATGGAAAGCTTTCAGTAGAGTGCTCTATAATGGCATAGTGCATTCCTCTAGAAGGGTAACATGAGT GATATTCTTTAACTGACTACCATACTTTTCTAATATGCATACACTGACATTAAGTAATTGCATCCACCACAGGAATAAAC AGATCTTCAAAGAATGATCAAAACAACAAGGAAATTCTTCTCCAGCTTTCTCATGTGCCAAAAGATGTACCTATCTGCAA AATTTCAGATGACGATTTTACTGAGGTATTAATGCTGTTGTAACGGGAATTTCTGCTGTGGTATTTTCCATTTCTAAAGA CATTGGAGCAAACTAAGTAACAGTTACTAAGTAAAATTGGACAGTTCACATTCTCCAAACCATTTTTATTTAAGATGATG AATGTTGATACTGAGGTGATCATTGTTAATACTCTTACAAGTTCTTTGCTGTTATCTAGAAGATAAGATATGTGTATCCC TATTCTTTTTAGGAAATTATGCCTACCTTTCAGGATTCAGCTTCAGAGTCATTCATAATTGTAACATTTAACATTATCTG CAGGGAGAGTGTCAAGATCTGTATCAGAGAATGAGAAATGGTCTGCTCAAACAGCCAACTATAGTAAGTTTGTTGTGTGT GAGTGATTTAGTGTAGTGTGTACCATAAAAAACTTAATGCTCAGTGATCTGATCAAATATGAGTAAGGTCCATGTAAAAC TTTTCTGATTTTAATAATACAATTATATTATTATCCGCGGCAAAAATATGCTGGCTGTACTAGAAAATAACTGCAAAAAG AGGTGAATTAAGTTTAATGGTTTAGTAAGAAAAACTATTACATCTTTTGAAGCTTCTTTGCTGTATATCTGGTATCTACA GAACCAAGTTTGAGAAGCTACAGTTGACTAAAAATGAAGTGTATCCTTTAAAACCTAGCCTTAAACTAATGCTTTTCACT TGTTTCAGGAATTCTTTTACCTGAGATATAAATGAAGTGTATCCTCACTATTTCTATTTGTTACTTCTGCTAGATAATCT CCTATTTGTTATTTCTTTTCGTTAGCTCAAATATATGTAAAGGTTGAAGACAAAACATGTTTTAACTCTTGAGCATTGAA GGCAGAGTCTAATTTCTCCCATTGTCACATCACGCCTAATCGGACATTCTTTGGTGTTTAATGTTCTTTAAATGAAGCTA ATATATATGTTAGTAACATAAAAAAGGGACAAGTGAGCCGGGGGTAGTGGGGAATAGAGGGGTCACATATGATATGATAT AAATCACAGGGAAGCAGCATTAATACCAATAGCTTCCTGTGAAACAAAATCATGAAATAAATTTTAGGCCATATATTTAG GTCAGTTCAGTTCTAGTTTTTGCCTTGGGCCAGAACCTTTGAACATTTATTTTTCAGCCACTTTAGGCCATACTGATTGT ACGGGCTTTCTCTTGTGGTGTGAGCATTTTGCTTCTTAAGAGTAAGAGTTTGATTTGTAAAAATATAATTGATTGGATTT GTAGTATAATGCCAACAGTTCATAACCAGTTAACCACCTCTGTGTTTTTCAGCTGGAGCTTGAGCAGAAAGCAAGAAGTC TGCATGAAGATATCATAAAGCATGTATGTAGCATACTAGCATATCATCATTATTGTGCTGTGTAAATCCCTTTAGCTATT ATAAACATAGAACTCTATCATTGAAAAGTCTTGTTGTATAGCAAGTATATTCATCATGAAATTTAGCAAGGGTGCAAAAC TTACTATTTTCCAAAAATTAGTGGTAAAAACTCAACATATGCCTAATACTTCATTTGTTATTAAAAATCTTATGAAATTT GGTTAAGCATGTGTCTGAAGGCGCTAGCTGAGTTTTTTTAAATCTGCCCTTAAATTAACACTTTAATCCTTTATGCCTAA TACTTCATTTGTTATTAAATTATTGAACATTCCTGATTCCTTTCTTAAATTATACAAGAACATCAGACCTGTAAATTTGT TTTACTGATATTTGTCTTCTGCTTTATATGGCAGTGGATTCCAAGGGAGTTACAATTGTTACAGAACCGCATTGATCAGG CCAATGAAAGGGGACGGAGGAGAGAATATCCTTTCATGATATTGATTTTTTTTAACATTACCTAAGAGTAGTAGCTAAAG GCCAAAATGTTATAAATTGTTAATTTGTTTCCTAGTTTAAAGCTCTAAATCACCTAATCACTTCCAAGTGGGAGAGAATT GTCAAGTAGTGTGAAAGTTGTTAAATTGTTTCCATTTGTTTCCTATTCTTCTGTGCATGGTATTTTATAATAACCATGAA TGCGCAATTTGGGCCTTAACCATATTTCCATACACTTTCTGATTATATGGACAGAAAACTGAAGCTTGAGACTCCGTTGG AACAAACACGTTTACTAAGTAACATTCCAAATGTAATTCCTGAAATAGCTGATTCCAACCTATCACCGGAGGGTTCCCCT AGAGAAGATAAGCTTGAGCAAAATGGTTTGCCAGATTTAGCCATTGGAGAGACTTCTGTCTCTGGTGGATGCTACTCCAA ACACAGTAGTTTTGCTCGATATCTGAATAAAATAGATGTTGCAGGTTTGCCCGGTATTTCTCCCAGTACTCCCTGTGTTT TTCTTAATCTGTTATATCCTTATAACTTCAATTTTGTTTTCTGATGAACATTTTCTCTGTTGGATTCATTTAAATGGTCT GTCATTAAACTTGATTCCTGACAGGATTTTATGATATTGTTTGATCCATGTAGCCCACATCACCTAGTGGGAAAAGGCTT TGGTTGTTGTTGATTATTAGAGATAATAAAGAGAGAAAACTAACGCTGTATTATTTTCTTGATAATAGAAGGTTATGCGG CTCTCTCTATATAGAGTGCACAGAACACACAAACTTACACAGCAAGCAAGTAACCCTAGCCGCCACATAGGCTGGGATAC TAAACAACTAATAACATAACCCTAGCCGCCACATAGACTGGGTCATTAAACAATTAATAATAATATAAAAACAATACTAA TTACTAATTAACTAAATCAACTATTATCTCTATATTGATCAACACTTTCTTTCTACATTGGGGGAGGGGTTCTTGATATT GCATCTATCCTCTGTATCACTTCACATTCTTGAGGGTGTGATTTATTGTCAATTCTCAAGATTCTCTACAATTTAAGTAA ATTTTTGTTTTGTTTAAACAACTAAATTCTTGTTTTACTTAGACTAGGTTCACTTAGTTAAATTAGAATTTAATGTGTAT TTGTGATATTTTTATTTTTTTATTCCTATATATATCCTATTTAGATGCGAATGCTTTGTACCCCGTCAAAATAGACTTGC ATGCTTTTGTTTTGTTTCTGAAAGTGCTTTTGTTTTGTTTCTGAAAGTTTCTTGAGCTAGGAAACATTTATGTGTTGCTA ATTTAGGCCCCATTTGGAAGAGCTTATTTGAGCTTATCTGATAGCATAAGCGCTTATGCCAGTGTTTGGGAGAGCTTATG CAAACAGCTTATGACCTACCATAAGCTGTTTTGAGCTTATTTTCATAAGCTATTCAGAATAGCTTATGAAAAAGAGCTTA TGCTTATATATAGCTTATTTTCAATTTCTTTCAATAAACTTTTTAAAACAGCTTATGAATAAGCGCTTAGGTCATAAGCG CTTATGACCATAAGCGCTTAATTAAGCTGTTTTCCCAAACGCGGCCTTAGTTAACGTTTTAACCAATTATTCATGAAATA TAACACAAATATCCATTGTGTCACTTTTCATGGCTTAGGTACAAAAACTCCGGTGAAGACAAACCAAGTTAAATGCACTT TTGAAAGTAAGTCGATTCAATCCAGCTCAAAAGTCAGGCAAGATGATCAGAAGGCTGCACTCATTAAAGAACTAAACTGT GATTCTCAGATCTTCAACACAGAACTCAGCCCGTGGCAATCAAGTAACACTGAATCTGGTTCTGGTATAGACACCAAAAA TCTGAGTGCTGCTACCAGGAATGCTAAACAGACAATAAAGGAAAAGCAAATCATTTCAGTTGCTGAAACTATTGATACAA GTGTCAATGACAAACAAGTTAAAAGTGCTTCAGCTATTGTAGTGGAGCAGAAAGTTAGCATTTCAACTGCAGATGTTATC GAGTTAAGCGACAGTGATGAAGAGGATGTAAATGTTGCAGATGCTTCAGCAGGAGAAAAAATGGAGAGTCCTGGGATTTC TATTTGGCATTGTTTGGGTCCTTCTGGTGAAAAGAGAGGGCCCTATTCAATGTCTGTTCTCAAATGTTGGAGTGAATCTG TCACTCATCCCATAAAATTCAAGGTCTGGAAGACAGGTCAGAGTGAAGAGGAGGCAATACTTCTCACTGATGCACTTAAC CAAAAATTTCCCAGTATTTAGTATATGGAAATGAAGGGCAAACCTTCCCATAAGTATAAGTTTACCCGTGTCAATGATAT GGTGTTGAATACTTGAATTTTGACCAAATAGGTGCTTTTGTGGTATACTGCAAGTTAAAAAGTACATTAGCTGTTGACAG TTCCTGTGTGATCTTGTTTTCTTTTTAAGTAGTAAATCCCGCTTACTAAAGTTATATTTTTCTTGGGCATCTCTAACATA CTAAGAAAAGTTTATTT
CDS sequence (LotjaGi6g1v0050200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCAGAACGAAGAACAAGAGAAAGAAGGAAGAGATGGCTGAGGATTGGTGCTTTGCGTGCAAGGATGGAGGGCTCAT GAGGGTCTGCGATTATAGGGATTGTCTTAAAGCTTATCATCCTCGTTGCGTGGGAAAGGATGATTCCTTTTTGGAGAATG ACAGTTACTGGAGTTGTGCTTCACATTCTTGCTACCATTGCGGCAAAACATCTAAGTTTAGATGCTTATGCTGCCCAAGT GCTGTTTGTAGGGAATGCATCTATGTCGCTGAAATTGCTGTTGTCAAAGGGAACAAGGGATTTTGCCATAACTGCACAAA ACTTGCATATTTATTTGAAGAAAAGGCTGATGCTGATTCTGATGGGGGAAATGTAGATTTCAAAGACCGAGAGACATATG AGTGCTTATTCTCAGAATATTATGAAATTATTAAAAAAGAAGAAGGGCTGAATTCTGAACATGTACACTCTGCCCGGAAC TTCTTGAAGAATAGCAAAAACAGGAGTGATTTGGATCTAGATGAAATAGATGAAGAGGAAGATAATAGTGGAGAATCTGA TGTAAGTGACTATGAAGTTTCTGATTGTGATGACCTGAATGACAGAGATGGAGTTAAACCAGCCAGGAAAAAGAAGCGCA CGGACAAGCTTAAATCAATAAAAGGAAAGGTGAAAGATAAGAAAAAAGAGTTTATTGGATGGGGTTCAAGAAGTCTCATA GAATTTCTTAAATATACTGGTAGTGACACGAGCAGAGAGTTATCTGAATATGAAGTTGCTTCGATAATTACTAAGTACTG CAATGAAAACAATCTTTTTGACCCCCAGAAAAAAAGAAAGATAATTTGTGATCAACAACTAAGATCTTTACTGGGGAGGA AATCAGTGACCAAAAACAGTATACAAAACCTTCTGGCACCACATTTTGCAGAGAATATTGAAGAAATGGATGATGTCATG GATGATGTTTCTAATAGTTCAGAAGATAGGGATGATAATGAGCCATTGAAAAATTCGAGGCAGAGGAAATCAATCTCAAA TGTCAAATCTTGTCAGAAGGTAGGTTCTGAAAAGGCTCAGAGCTGCCTTGCAGCCATAGTTAGTTCAAACCTCAAACTTG TCTACTTAAAGCGGAGCTTAATGGAGGAGCTTTTGAAGCAACCGGAAACTTTTGATGGCAAAGTGTTTGGAAGTTTTGTA AGAATAAAGTCTGACCCGAATGACTTCTTACAGAAGAATTCTCATCTGCTCTTACAAGTAGTAGGAATAAACAGATCTTC AAAGAATGATCAAAACAACAAGGAAATTCTTCTCCAGCTTTCTCATGTGCCAAAAGATGTACCTATCTGCAAAATTTCAG ATGACGATTTTACTGAGGGAGAGTGTCAAGATCTGTATCAGAGAATGAGAAATGGTCTGCTCAAACAGCCAACTATACTG GAGCTTGAGCAGAAAGCAAGAAGTCTGCATGAAGATATCATAAAGCATTGGATTCCAAGGGAGTTACAATTGTTACAGAA CCGCATTGATCAGGCCAATGAAAGGGGACGGAGGAGAGAACTTTCTGATTATATGGACAGAAAACTGAAGCTTGAGACTC CGTTGGAACAAACACGTTTACTAAGTAACATTCCAAATGTAATTCCTGAAATAGCTGATTCCAACCTATCACCGGAGGGT TCCCCTAGAGAAGATAAGCTTGAGCAAAATGGTTTGCCAGATTTAGCCATTGGAGAGACTTCTGTCTCTGGTGGATGCTA CTCCAAACACAGTAGTTTTGCTCGATATCTGAATAAAATAGATGTTGCAGGTTTGCCCGGTACAAAAACTCCGGTGAAGA CAAACCAAGTTAAATGCACTTTTGAAAGTAAGTCGATTCAATCCAGCTCAAAAGTCAGGCAAGATGATCAGAAGGCTGCA CTCATTAAAGAACTAAACTGTGATTCTCAGATCTTCAACACAGAACTCAGCCCGTGGCAATCAAGTAACACTGAATCTGG TTCTGGTATAGACACCAAAAATCTGAGTGCTGCTACCAGGAATGCTAAACAGACAATAAAGGAAAAGCAAATCATTTCAG TTGCTGAAACTATTGATACAAGTGTCAATGACAAACAAGTTAAAAGTGCTTCAGCTATTGTAGTGGAGCAGAAAGTTAGC ATTTCAACTGCAGATGTTATCGAGTTAAGCGACAGTGATGAAGAGGATGTAAATGTTGCAGATGCTTCAGCAGGAGAAAA AATGGAGAGTCCTGGGATTTCTATTTGGCATTGTTTGGGTCCTTCTGGTGAAAAGAGAGGGCCCTATTCAATGTCTGTTC TCAAATGTTGGAGTGAATCTGTCACTCATCCCATAAAATTCAAGGTCTGGAAGACAGGTCAGAGTGAAGAGGAGGCAATA CTTCTCACTGATGCACTTAACCAAAAATTTCCCAGTATTTAG
Protein sequence (LotjaGi6g1v0050200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVRTKNKRKKEEMAEDWCFACKDGGLMRVCDYRDCLKAYHPRCVGKDDSFLENDSYWSCASHSCYHCGKTSKFRCLCCPS AVCRECIYVAEIAVVKGNKGFCHNCTKLAYLFEEKADADSDGGNVDFKDRETYECLFSEYYEIIKKEEGLNSEHVHSARN FLKNSKNRSDLDLDEIDEEEDNSGESDVSDYEVSDCDDLNDRDGVKPARKKKRTDKLKSIKGKVKDKKKEFIGWGSRSLI EFLKYTGSDTSRELSEYEVASIITKYCNENNLFDPQKKRKIICDQQLRSLLGRKSVTKNSIQNLLAPHFAENIEEMDDVM DDVSNSSEDRDDNEPLKNSRQRKSISNVKSCQKVGSEKAQSCLAAIVSSNLKLVYLKRSLMEELLKQPETFDGKVFGSFV RIKSDPNDFLQKNSHLLLQVVGINRSSKNDQNNKEILLQLSHVPKDVPICKISDDDFTEGECQDLYQRMRNGLLKQPTIL ELEQKARSLHEDIIKHWIPRELQLLQNRIDQANERGRRRELSDYMDRKLKLETPLEQTRLLSNIPNVIPEIADSNLSPEG SPREDKLEQNGLPDLAIGETSVSGGCYSKHSSFARYLNKIDVAGLPGTKTPVKTNQVKCTFESKSIQSSSKVRQDDQKAA LIKELNCDSQIFNTELSPWQSSNTESGSGIDTKNLSAATRNAKQTIKEKQIISVAETIDTSVNDKQVKSASAIVVEQKVS ISTADVIELSDSDEEDVNVADASAGEKMESPGISIWHCLGPSGEKRGPYSMSVLKCWSESVTHPIKFKVWKTGQSEEEAI LLTDALNQKFPSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 110 | 109 | 1.1E-20 | ||
| PANTHER | 4 | 808 | 805 | 3.3E-268 | – | |
| PANTHER | 4 | 808 | 805 | 3.3E-268 | – | |
| SUPERFAMILY | 14 | 71 | 58 | 1.15E-5 | ||
| SMART | 17 | 63 | 47 | 1.5E-5 | ||
| CDD | 17 | 62 | 46 | 4.22684E-13 | – | |
| MobiDBLite | 172 | 217 | 46 | - | – | |
| MobiDBLite | 173 | 197 | 25 | - | – | |
| Gene3D | 221 | 319 | 99 | 2.1E-33 | ||
| SUPERFAMILY | 225 | 315 | 91 | 1.81E-21 | ||
| CDD | 234 | 309 | 76 | 1.28243E-14 | – | |
| Pfam | 238 | 309 | 72 | 3.6E-14 | ||
| MobiDBLite | 322 | 350 | 29 | - | – | |
| SMART | 365 | 471 | 107 | 3.6E-31 | ||
| ProSiteProfiles | 365 | 494 | 130 | 28.402 | ||
| Gene3D | 365 | 492 | 128 | 2.1E-13 | ||
| SUPERFAMILY | 366 | 491 | 126 | 6.02E-25 | ||
| Pfam | 370 | 469 | 100 | 2.7E-16 | ||
| SUPERFAMILY | 746 | 807 | 62 | 1.18E-7 | ||
| ProSiteProfiles | 753 | 807 | 55 | 8.855 | ||
| Gene3D | 755 | 813 | 59 | 7.9E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0050200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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