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SSF55277

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Associated Lotus transcripts 28

Transcript Name Description Predicted domains Domain count
Lj0g3v0127099.2
– PREDICTED: zinc finger CCCH domain-containing protein 44-like [Cicer arietinum] gi|502161282|ref|XP_004512106.1|
Domains
36
Lj0g3v0248109.1
– GYF domain-containing-like protein isoform 3 [Theobroma cacao] gi|508710958|gb|EOY02855.1|
Domains
10
Lj0g3v0248109.2
– GYF domain-containing-like protein isoform 3 [Theobroma cacao] gi|508710958|gb|EOY02855.1|
Domains
9
Lj0g3v0315359.1
– PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max] gi|356535254|ref|XP_003536163.1|
Domains
7
Lj0g3v0335379.1
– PREDICTED: zinc finger CCCH domain-containing protein 44-like isoform X2 [Cicer arietinum] gi|502161278|ref|XP_004512104.1|
Domains
21
Lj0g3v0357229.1
– PREDICTED: zinc finger CCCH domain-containing protein 44-like isoform X2 [Cicer arietinum] gi|502161278|ref|XP_004512104.1|
Domains
10
Lj1g3v3357590.1
– Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|357467443|ref|XP_003604006.1|
Domains
35
Lj1g3v3357590.2
– Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|357467443|ref|XP_003604006.1|
Domains
34
Lj2g3v0547900.1
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357498959|ref|XP_003619768.1|
Domains
20
Lj2g3v0547900.2
– Zinc finger CCCH domain-containing protein [Medicago truncatula] gi|357498959|ref|XP_003619768.1|
Domains
20
Lj5g3v0101610.1
– GYF domain-containing protein [Arabidopsis thaliana] gi|15239132|ref|NP_199109.1|
Domains
11
Lj5g3v0103680.1
– GYF domain-containing protein [Arabidopsis thaliana] gi|15239132|ref|NP_199109.1|
Domains
11
Lj5g3v2297910.1
– GYF domain-containing protein [Arabidopsis thaliana] gi|15239132|ref|NP_199109.1|
Domains
10
LotjaGi1g1v0418700.1
– GYF domain protein; TAIR: AT5G42950.1 GYF domain-containing protein; Swiss-Prot: sp|O36025|MPD2_SCHPO GYF domain-containing protein mpd2; TrEMBL-Plants: tr|K7KHV4|K7KHV4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0418700
Domains
11
LotjaGi1g1v0563100.1
– Zinc finger CCCH domain protein; TAIR: AT3G51120.1 zinc finger CCCH domain-containing protein 44; Swiss-Prot: sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44; TrEMBL-Plants: tr|A0A0R0K9H0|A0A0R0K9H0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0563100
Domains
13
LotjaGi1g1v0563100.2
– Zinc finger CCCH domain protein; TAIR: AT2G16485.2 GW repeat- and PHD finger-containing protein NERD; Swiss-Prot: sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19; TrEMBL-Plants: tr|A0A0B2RGJ5|A0A0B2RGJ5_GLYSO Zinc finger CCCH domain-containing protein 44; Found in the gene: LotjaGi1g1v0563100
Domains
40
LotjaGi1g1v0627700.1
– GYF domain protein; TAIR: AT1G27430.1 GYF domain-containing protein; Swiss-Prot: sp|O36025|MPD2_SCHPO GYF domain-containing protein mpd2; TrEMBL-Plants: tr|A0A0B2R8Q0|A0A0B2R8Q0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0627700
Domains
10
LotjaGi1g1v0627700.2
– GYF domain protein; TAIR: AT1G27430.1 GYF domain-containing protein; Swiss-Prot: sp|O36025|MPD2_SCHPO GYF domain-containing protein mpd2; TrEMBL-Plants: tr|A0A0B2R8Q0|A0A0B2R8Q0_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0627700
Domains
10
LotjaGi2g1v0168800_LC.1
– Zinc finger CCCH domain protein; TAIR: AT5G08430.1 SWIB/MDM2 and Plus-3 and GYF domain-containing protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|V7C2T6|V7C2T6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0168800_LC
Domains
25
LotjaGi2g1v0168800_LC.2
– Zinc finger CCCH domain protein; TAIR: AT5G08430.1 SWIB/MDM2 and Plus-3 and GYF domain-containing protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|V7C2T6|V7C2T6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0168800_LC
Domains
25
LotjaGi2g1v0384000.1
– Zinc finger CCCH domain protein; TAIR: AT3G51120.1 zinc finger CCCH domain-containing protein 44; Swiss-Prot: sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44; TrEMBL-Plants: tr|G7KGD4|G7KGD4_MEDTR Zinc finger CCCH domain protein; Found in the gene: LotjaGi2g1v0384000
Domains
41
LotjaGi2g1v0384100.1
– Zinc finger CCCH domain protein; TAIR: AT2G18090.1 PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; Swiss-Prot: sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44; TrEMBL-Plants: tr|A0A1J7IDW5|A0A1J7IDW5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0384100
Domains
22
LotjaGi5g1v0017300.1
– GYF domain protein; TAIR: AT5G42950.1 GYF domain-containing protein; Swiss-Prot: sp|O36025|MPD2_SCHPO GYF domain-containing protein mpd2; TrEMBL-Plants: tr|I1MXV5|I1MXV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0017300
Domains
12
LotjaGi5g1v0202800.1
– RNA binding protein, putative; TAIR: AT5G16260.1 RNA binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog; TrEMBL-Plants: tr|A0A0B2Q0D8|A0A0B2Q0D8_GLYSO HIV Tat-specific factor 1 like; Found in the gene: LotjaGi5g1v0202800
Domains
19
LotjaGi6g1v0050200.1
– Zinc finger CCCH domain protein; TAIR: AT5G63700.1 zinc ion binding / DNA binding protein; Swiss-Prot: sp|Q9FT92|Y5843_ARATH Uncharacterized protein At5g08430; TrEMBL-Plants: tr|K7LRF3|K7LRF3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0050200
Domains
28
LotjaGi6g1v0242900.1
– Histone-lysine N-methyltransferase; TAIR: AT5G42400.1 SET domain protein 25; Swiss-Prot: sp|F4K1J4|ATXR7_ARATH Histone-lysine N-methyltransferase ATXR7; TrEMBL-Plants: tr|K7LBW1|K7LBW1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0242900
Domains
17
LotjaGi6g1v0242900.2
– Histone-lysine N-methyltransferase; TAIR: AT5G42400.1 SET domain protein 25; Swiss-Prot: sp|F4K1J4|ATXR7_ARATH Histone-lysine N-methyltransferase ATXR7; TrEMBL-Plants: tr|K7LBW1|K7LBW1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0242900
Domains
17
LotjaGi6g1v0242900.3
– Histone-lysine N-methyltransferase; TAIR: AT5G42400.1 SET domain protein 25; Swiss-Prot: sp|F4K1J4|ATXR7_ARATH Histone-lysine N-methyltransferase ATXR7; TrEMBL-Plants: tr|K7LBW1|K7LBW1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0242900
Domains
17

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 3.57