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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0053900 |
| Transcript ID | LotjaGi6g1v0053900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT1G66150.1 transmembrane kinase 1; Swiss-Prot: sp|P43298|TMK1_ARATH Receptor protein kinase TMK1; TrEMBL-Plants: tr|I1MZG4|I1MZG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0053900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9660288..9664615) extracted from Lotus japonicus Gifu genome v1.2.
ATTAAACTCTTTTTTTAAACGGAATGATGTTTTCTAAACTTTACTTTTTTTTTTGGTTACAAGAGAAAATTTAACAGGAG ATCAAAACTAACTTATATCATCTAGATACATAGATGCATAGACAAAGGATGGTGGTTGAGCCCAAACTTTAACTGGAGCC CCTATTCTTACCGCTTCTCGAGCTAGAGTATGATATTTTTACCAATGCGACCAACCCAAAATTGAGCGATGTATAGAATT TTAGTTTGACCACCCTAACAATTTTACATCTCATCTAAAGAGAACATGCCAAGTTGGCAAGTAGGCCCATTGTCCATAAG CACACCCACTGAAATCCAACCTTTTTGCATTGTCACAAGTCATATGCCAGCCCGCGTTTTCCGATACGTGGCCCCCACCT CCCATGTGCTCAGTCTCTCTCAATTACTCACTCACTCACTCCACTCTCCTCCATGCCACCCCACACCACCTGTCTCCGCC ACCACCCATCTCCATCTCCATCTCCATCTCCATCTCTTCTTCTTCACTCTCCCCACACTCACCACCACCAGTACCACCAC CACCACCATGATGACAACAACTCACTTCCCCATTCTCCTCTCCCTCTCCCTCTTCTTCTTCCTCCTCACCGTTCACTCCC AACCAACCTCACCAGACACCGCCGCAATGCTCGCTCTCCGAACCTCCCTCGACCCGCCGGAGTCTCTCGGCTGGTCCGGC CCGGACCCGTGTACATGGACCCGCGTCGTCTGTTCGGAGGAAAAACGGGTCACCCGGATCCAAATCGGTCGCCAGAGCCT CCATGGAACCCTCCCAAACAGCACCACTTTCCAAACGCTAACCGAGCTCGAACGCTTGGAGCTTCAGTTCAACAACATCT CGGGTCCTCTTCCAAGCCTCAACGGGTTAACCTCCCTGCAAGTTCTCATCCTCAGCAACAACCGCTTCACTTCCATCCCC GACGATTTCTTCGGCGGTCTCACTGAGCTTCAGTCGGTGGAGATCGACAACAACCCGTTCCAACGGTGGGAGATTCCCGA GAGCCTCCGTGACGCGTCGTCGCTGCAAAACTTCTCCGCCAACTCCGCCAACATCACCGGGAGAATCCCAGATTTCTTGG CGCTTCCGGGGTTGACCCATTTGCATTTAGCCTTCAATGGTCTTGAGGGTGTGCTTCCTTCGAGCTTTGGTTCGTTGCAG CTTCAGACTCTCTGGCTGAACGGGCAAGAGGATGGTGCTGACAGGCTTGGGGGCGCTGTTGATGTTTTGCAGAACATGAC TTCTCTGACTCGGGTTTGGTTGCAATCCAATGCTTTTTCTGGGTCATTACCTGATTTCTCAGGTTTGCAAAGCTTGGAGG ATTTGAGTTTGAGGGATAACTCTTTCACGGGTCCTGTTCCTGGTTCATTGGTGGGACTCAAGTCACTCAAATCTGTGAGC TTGACCAATAACATGTTTCAGGGGCCTGTGCCTGTGTTTGGTGCTGGGGTTAAGGTGGATTTGGAGGATGATTCGAATAG GTTTTGCTTGCCGGGTCCGGGTGATTGTGATAACAGGGTGAATGTTTTGCTTTCCATTGTTCAGTCTATGGGGGATCCTA AAAGGTTTGCGGATAATTGGAAGGGGAATAATCCATGTGCTGATTGGATTGGGATTACTTGTAAGGATGGTAACATTGCT ATTGTTAATTTTCAGAAGATGGGTCTCACTGGCACTATATCACCCAAGTTTGCCTCACTTAAATCACTGCAAAGATTGGT GCTTGCTGATAATAATCTCACCGGTTCGATTCCAGAGGAGCTTACCTCCCTGCCTGGGCTTGCTGAATTGAATGTTGCAA ACAATCAGCTTTATGGAAAGATCCCTAGTTTTAAGAGCAATGTGATTGTTACCAGTAATGGTAACCCGGATATTGGGAAG GATAAGCCCAGCCCATCACCTAAAGGTCCATTGTCACCAAACTCGACAGCGCCGGACACAAGGGAAGAAAATGGTAGCAA AAAATCTAACCATGTTGGAGTAATTGTGCTTGCTGTGATTGGGGGTGTAGTGTTGATATTGGGGATTGGTTTGCTAGTTT TCTGCTTGCTTAGGATGAAGCAAAAACGGCTAAGCAGGGTTCAGAGCCCAAATGCACTGGTTGTTCACCCTCGTCATTCC GGATCAGATAATGAAAGTGTGAAGATAACAGTTGCAGGTTCAAGTATCACTGTTGGCGCTGTTAGTGAAACCCGTACAGT ACCTAGCAGTGAGACAGGGGACATTCAGATGGTTGAAGCAGGAAACATGGTTATTTCTATACAAGTCCTGAGGAATGTCA CAGACAATTTCAGCGAGAGAAACATATTGGGACAAGGAGGTTTTGGAACAGTCTATAAAGGTGAACTGCATGATGGTACC CAAATTGCAGTGAAAAGAATGGAGTCTGGGGCCATAACTGGGAAAGGTGCAACTGAGTTTAAGTCTGAAATTGCTGTTTT GACCAAGGTTCGCCACCGGCATCTTGTTTCTCTACTTGGCTACTGCTTGGATGGGAATGAGAAGCTTCTGGTGTATGAGT ACATGCCTCAAGGGACGTTAAGTAGGCATCTCTTTGACTGGCTAGAATATGGATTGAAACCACTGGAGTGGAATAGAAGA TTGACCATTGCCTTGGATGTGGCAAGGGCGGTTGAGTACCTTCACAGCTTGGCCCATCAAAGCTTTATACATAGGGACTT GAAGCCTTCAAACATTCTACTTGGAGATGATATGAGGGCAAAGGTTGCAGATTTTGGGCTTGTGCGTCTTGCTCCGGAAG GAAAAGCTTCAATAGAAACAAGAATTGCGGGAACTTTTGGATATTTGGCTCCAGAATATGCAGGTATGCCCCCTTCTCTT TTTCAAGTTCTTTGTGAGCTAGATCATTTTTTAATTATTCCCAATGAAGCCAGTGGGAATAGTCTGATCATGATCTACAT AGGTTTGGTTTAATTTGCTTTAAATTTTGGCTACGTTTGTTATGCGAATGGCTAGGTAGATCTCAAGGGAAAGTACATCA TAAATCTAGATTGATCTACACATTAATGGAAAGCAGACATATTGAATGCTTTTTAAGCAACATGCATTTCATTTTAGGAA GGTAATAATTAATGAAACATGTCTTTTTTATCAACTGTGTAATGTAATAAACTCTATGTCAATATTTTGGCCAGAGATAT TCTCTGTCACCATAACTGGACCTGGCAATCTTAACTTCCATTACTGGAAGATCAACAAACAATAATGTTATTGGTATGTA ACTATGTATTTCACATTTGGTAAAGCAATTGTGATGTCTAGAGTCCCGCATTGGTTTTGCTGTTTTGGAAATTATGAACC TCTCATGGCTTGCTCTTATCCATGGATGTGAGATATTTGTATTGGTTAGGTGTGTTTAATCTTATATTTTTGCTTTTTAT TATGATCAAAAGTTTGCTAGCTCTCGCATGAATTTTTCTTTGATGTTGATTGATTTTTGGACAAATGTCTCTTACACTGT CGCGCTTGCTATCTTCTTGTAGTTACTGGTCGCGTGACAACTAAAGTTGATGTATACAGCTTTGGGGTAATATTGATGGA ACTGATAACTGGAAGAAGAGCAATTGATGAGACCCAACCGGAGGATAGTATGCACCTGGTAACATGGTTCCGTAGAATGT ATGTAAATAAGGACTCATTTCCTAAGGCCATTGACAGCACAATAGAGCTCAATGAGGAAACACTTGCTAGTATTCACACC GTAGCGGAGTTAGCAAGCCACTGTTGTGCAAGAGAGCCATATCAAAGGCCCGACACGGGTCATGCTGTGAATGTGCTTTC TTCTCTTGTCGAGCTATGGAAACCATCGGAACACAGTTCTGAAGATATATATGGCATAGACCTAGACTTGTCCTTACCAC AAGCACTAAAGAAGTGGCAGGCCTTTGAAGGTAGAAGCGAAATGGAATCTTCTTCTTCTTCACTCCTTCCGAGCTTGGAT AACACTCAGACAAGCATTCCCCCGCGTCCATACGGGTTAGCCGATTCCTTTACATCAGCAGATGGGAGGTGATCATGTTT AGTTGTAAATAATTGTAATGGTGGTTCTGTAGTTTGTTGTTCTTCATTCTCCTTGCTTCTTGCTGTAGTTTCTTATTTGA ACTTGGTTATCATTTTTCATGGTGTAGTAGTTTCTTCCACAGTTAAATCCTATTACTTCTTCAGAGTTTGGTTGCAGCAT TTTACTGCAAAATTGAGATAAGATTCTTAGCTGAATATTTACTTCTCATCTTATGTTCGTGTTTTTTGTGTTTCAATTCA TATTCATG
CDS sequence (LotjaGi6g1v0053900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAAGTTGGCAAGTAGGCCCATTGTCCATAAGCACACCCACTGAAATCCAACCTTTTTGCATTGTCACAAGTCATAT GCCAGCCCGCGTTTTCCGATACGTGGCCCCCACCTCCCATGTGCTCAGTCTCTCTCAATTACTCACTCACTCACTCCACT CTCCTCCATGCCACCCCACACCACCTGTCTCCGCCACCACCCATCTCCATCTCCATCTCCATCTCCATCTCTTCTTCTTC ACTCTCCCCACACTCACCACCACCAGTACCACCACCACCACCATGATGACAACAACTCACTTCCCCATTCTCCTCTCCCT CTCCCTCTTCTTCTTCCTCCTCACCGTTCACTCCCAACCAACCTCACCAGACACCGCCGCAATGCTCGCTCTCCGAACCT CCCTCGACCCGCCGGAGTCTCTCGGCTGGTCCGGCCCGGACCCGTGTACATGGACCCGCGTCGTCTGTTCGGAGGAAAAA CGGGTCACCCGGATCCAAATCGGTCGCCAGAGCCTCCATGGAACCCTCCCAAACAGCACCACTTTCCAAACGCTAACCGA GCTCGAACGCTTGGAGCTTCAGTTCAACAACATCTCGGGTCCTCTTCCAAGCCTCAACGGGTTAACCTCCCTGCAAGTTC TCATCCTCAGCAACAACCGCTTCACTTCCATCCCCGACGATTTCTTCGGCGGTCTCACTGAGCTTCAGTCGGTGGAGATC GACAACAACCCGTTCCAACGGTGGGAGATTCCCGAGAGCCTCCGTGACGCGTCGTCGCTGCAAAACTTCTCCGCCAACTC CGCCAACATCACCGGGAGAATCCCAGATTTCTTGGCGCTTCCGGGGTTGACCCATTTGCATTTAGCCTTCAATGGTCTTG AGGGTGTGCTTCCTTCGAGCTTTGGTTCGTTGCAGCTTCAGACTCTCTGGCTGAACGGGCAAGAGGATGGTGCTGACAGG CTTGGGGGCGCTGTTGATGTTTTGCAGAACATGACTTCTCTGACTCGGGTTTGGTTGCAATCCAATGCTTTTTCTGGGTC ATTACCTGATTTCTCAGGTTTGCAAAGCTTGGAGGATTTGAGTTTGAGGGATAACTCTTTCACGGGTCCTGTTCCTGGTT CATTGGTGGGACTCAAGTCACTCAAATCTGTGAGCTTGACCAATAACATGTTTCAGGGGCCTGTGCCTGTGTTTGGTGCT GGGGTTAAGGTGGATTTGGAGGATGATTCGAATAGGTTTTGCTTGCCGGGTCCGGGTGATTGTGATAACAGGGTGAATGT TTTGCTTTCCATTGTTCAGTCTATGGGGGATCCTAAAAGGTTTGCGGATAATTGGAAGGGGAATAATCCATGTGCTGATT GGATTGGGATTACTTGTAAGGATGGTAACATTGCTATTGTTAATTTTCAGAAGATGGGTCTCACTGGCACTATATCACCC AAGTTTGCCTCACTTAAATCACTGCAAAGATTGGTGCTTGCTGATAATAATCTCACCGGTTCGATTCCAGAGGAGCTTAC CTCCCTGCCTGGGCTTGCTGAATTGAATGTTGCAAACAATCAGCTTTATGGAAAGATCCCTAGTTTTAAGAGCAATGTGA TTGTTACCAGTAATGGTAACCCGGATATTGGGAAGGATAAGCCCAGCCCATCACCTAAAGGTCCATTGTCACCAAACTCG ACAGCGCCGGACACAAGGGAAGAAAATGGTAGCAAAAAATCTAACCATGTTGGAGTAATTGTGCTTGCTGTGATTGGGGG TGTAGTGTTGATATTGGGGATTGGTTTGCTAGTTTTCTGCTTGCTTAGGATGAAGCAAAAACGGCTAAGCAGGGTTCAGA GCCCAAATGCACTGGTTGTTCACCCTCGTCATTCCGGATCAGATAATGAAAGTGTGAAGATAACAGTTGCAGGTTCAAGT ATCACTGTTGGCGCTGTTAGTGAAACCCGTACAGTACCTAGCAGTGAGACAGGGGACATTCAGATGGTTGAAGCAGGAAA CATGGTTATTTCTATACAAGTCCTGAGGAATGTCACAGACAATTTCAGCGAGAGAAACATATTGGGACAAGGAGGTTTTG GAACAGTCTATAAAGGTGAACTGCATGATGGTACCCAAATTGCAGTGAAAAGAATGGAGTCTGGGGCCATAACTGGGAAA GGTGCAACTGAGTTTAAGTCTGAAATTGCTGTTTTGACCAAGGTTCGCCACCGGCATCTTGTTTCTCTACTTGGCTACTG CTTGGATGGGAATGAGAAGCTTCTGGTGTATGAGTACATGCCTCAAGGGACGTTAAGTAGGCATCTCTTTGACTGGCTAG AATATGGATTGAAACCACTGGAGTGGAATAGAAGATTGACCATTGCCTTGGATGTGGCAAGGGCGGTTGAGTACCTTCAC AGCTTGGCCCATCAAAGCTTTATACATAGGGACTTGAAGCCTTCAAACATTCTACTTGGAGATGATATGAGGGCAAAGGT TGCAGATTTTGGGCTTGTGCGTCTTGCTCCGGAAGGAAAAGCTTCAATAGAAACAAGAATTGCGGGAACTTTTGGATATT TGGCTCCAGAATATGCAGTTACTGGTCGCGTGACAACTAAAGTTGATGTATACAGCTTTGGGGTAATATTGATGGAACTG ATAACTGGAAGAAGAGCAATTGATGAGACCCAACCGGAGGATAGTATGCACCTGGTAACATGGTTCCGTAGAATGTATGT AAATAAGGACTCATTTCCTAAGGCCATTGACAGCACAATAGAGCTCAATGAGGAAACACTTGCTAGTATTCACACCGTAG CGGAGTTAGCAAGCCACTGTTGTGCAAGAGAGCCATATCAAAGGCCCGACACGGGTCATGCTGTGAATGTGCTTTCTTCT CTTGTCGAGCTATGGAAACCATCGGAACACAGTTCTGAAGATATATATGGCATAGACCTAGACTTGTCCTTACCACAAGC ACTAAAGAAGTGGCAGGCCTTTGAAGGTAGAAGCGAAATGGAATCTTCTTCTTCTTCACTCCTTCCGAGCTTGGATAACA CTCAGACAAGCATTCCCCCGCGTCCATACGGGTTAGCCGATTCCTTTACATCAGCAGATGGGAGGTGA
Protein sequence (LotjaGi6g1v0053900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSWQVGPLSISTPTEIQPFCIVTSHMPARVFRYVAPTSHVLSLSQLLTHSLHSPPCHPTPPVSATTHLHLHLHLHLFFF TLPTLTTTSTTTTTMMTTTHFPILLSLSLFFFLLTVHSQPTSPDTAAMLALRTSLDPPESLGWSGPDPCTWTRVVCSEEK RVTRIQIGRQSLHGTLPNSTTFQTLTELERLELQFNNISGPLPSLNGLTSLQVLILSNNRFTSIPDDFFGGLTELQSVEI DNNPFQRWEIPESLRDASSLQNFSANSANITGRIPDFLALPGLTHLHLAFNGLEGVLPSSFGSLQLQTLWLNGQEDGADR LGGAVDVLQNMTSLTRVWLQSNAFSGSLPDFSGLQSLEDLSLRDNSFTGPVPGSLVGLKSLKSVSLTNNMFQGPVPVFGA GVKVDLEDDSNRFCLPGPGDCDNRVNVLLSIVQSMGDPKRFADNWKGNNPCADWIGITCKDGNIAIVNFQKMGLTGTISP KFASLKSLQRLVLADNNLTGSIPEELTSLPGLAELNVANNQLYGKIPSFKSNVIVTSNGNPDIGKDKPSPSPKGPLSPNS TAPDTREENGSKKSNHVGVIVLAVIGGVVLILGIGLLVFCLLRMKQKRLSRVQSPNALVVHPRHSGSDNESVKITVAGSS ITVGAVSETRTVPSSETGDIQMVEAGNMVISIQVLRNVTDNFSERNILGQGGFGTVYKGELHDGTQIAVKRMESGAITGK GATEFKSEIAVLTKVRHRHLVSLLGYCLDGNEKLLVYEYMPQGTLSRHLFDWLEYGLKPLEWNRRLTIALDVARAVEYLH SLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEL ITGRRAIDETQPEDSMHLVTWFRRMYVNKDSFPKAIDSTIELNEETLASIHTVAELASHCCAREPYQRPDTGHAVNVLSS LVELWKPSEHSSEDIYGIDLDLSLPQALKKWQAFEGRSEMESSSSSLLPSLDNTQTSIPPRPYGLADSFTSADGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 576 | 576 | - | – | |
| PANTHER | 122 | 1005 | 884 | 3.7E-279 | – | |
| Gene3D | 122 | 421 | 300 | 1.6E-80 | ||
| PANTHER | 122 | 1005 | 884 | 3.7E-279 | – | |
| Pfam | 123 | 157 | 35 | 7.2E-6 | ||
| SUPERFAMILY | 156 | 531 | 376 | 2.04E-50 | – | |
| SMART | 185 | 207 | 23 | 350.0 | ||
| ProSiteProfiles | 187 | 209 | 23 | 6.749 | ||
| SMART | 208 | 231 | 24 | 2.3E-5 | ||
| Pfam | 210 | 262 | 53 | 2.6E-6 | ||
| ProSiteProfiles | 210 | 231 | 22 | 7.566 | ||
| ProSiteProfiles | 234 | 255 | 22 | 4.57 | ||
| SMART | 280 | 303 | 24 | 3.9 | ||
| ProSiteProfiles | 282 | 303 | 22 | 4.947 | ||
| SMART | 331 | 353 | 23 | 230.0 | ||
| ProSiteProfiles | 333 | 355 | 23 | 5.417 | ||
| SMART | 354 | 377 | 24 | 190.0 | ||
| Gene3D | 422 | 547 | 126 | 2.8E-33 | ||
| Pfam | 425 | 459 | 35 | 1.2E-4 | ||
| SMART | 485 | 509 | 25 | 32.0 | ||
| ProSiteProfiles | 487 | 510 | 24 | 6.272 | ||
| ProSiteProfiles | 511 | 533 | 23 | 5.109 | ||
| MobiDBLite | 537 | 572 | 36 | - | – | |
| Phobius | 577 | 602 | 26 | - | – | |
| TMHMM | 580 | 602 | 23 | - | – | |
| Phobius | 603 | 1035 | 433 | - | – | |
| Gene3D | 642 | 759 | 118 | 1.2E-35 | – | |
| SUPERFAMILY | 657 | 967 | 311 | 1.08E-79 | ||
| SMART | 682 | 962 | 281 | 1.2E-44 | ||
| ProSiteProfiles | 682 | 962 | 281 | 40.372 | ||
| Pfam | 683 | 955 | 273 | 9.9E-47 | ||
| CDD | 688 | 961 | 274 | 1.89505E-92 | – | |
| ProSitePatterns | 688 | 710 | 23 | - | ||
| Gene3D | 760 | 978 | 219 | 3.3E-56 | – | |
| ProSitePatterns | 807 | 819 | 13 | - | ||
| MobiDBLite | 1001 | 1021 | 21 | - | – | |
| MobiDBLite | 1001 | 1035 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0053900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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