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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0183400 |
| Transcript ID | LotjaGi6g1v0183400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Non-specific serine/threonine protein kinase; TAIR: AT4G20270.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|O65440|BAME3_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3; TrEMBL-Plants: tr|I1KXV5|I1KXV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0183400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47614975..47618919) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGTATCTTCTAGTGTATATTCACTATAACTTTAAGCTCTATGAGTTGAGATGTTCTCATTGCTCTTTCATTCCTCTA TCTAAACCAGTTATGGCCACTCCTTCTTTCAGTTTTGTGATCACTTGCTTCCTCTTCCTCTTTCTGTTCCTCACTACTAG TCCTGCTTCTGTTTCTTCACTTCCTCTTTCTCTGAGAAACCAAGCTTCTGTATTGGTTTCTCTCAAACAAGGTTTTGAAG CTGCTAACCACTCTTCTTTGAGCAGTTGGAAAATCTCTAACTACTTGTCCCTTTGCACCACATGGCATGGCATTCAGTGT GACCATGATAATAACATTTCTGTGGTGTCATCACTTGACATATCCAATTTAAACATTTCTGGTTCAGTTTCTGGTATTCA TAGGTTACCAAACCTGAGATTCCTCAACATGTCTAACAACATGTTCAGTGGAAACTTGAGCTGGGAAATTTCACACTTGA AGGAGCTTGAGGTTCTTGATGCTTATAACAATGAGTTCAATGGTTCACTTCCTGAGAGTGTGATTCAACTCCCATGGCTC AAGCACTTGAATTTTGGAGGGAACTACTTCTCTGGGAAAATCCCTCCAAGCTATGGGAAAATGAGGGGGCTCAACTTTCT GTCTCTTGCAGGAAATGATTTGAGTGGTTTCATACCAAGTGAGATTGGGAATCTCACTAACCTTACCCATCTTTTATTGG GATACTACAATCAATTTGAAGGTGGGATCCCACCTCAATTTGGTGAATTGATCAACTTGGTTCATTTAGACCTTGCAAAC TGTGGCTTGAATGGTTCAATTCCAGCTGAGTTAGGAAAACTCTACAAGCTAGACACACTCTTCTTGCAAACTAATCAGCT CACAGGATCAATCCCACCTCAGCTAGGAAACTTGACTAGTTTGAAAAATCTTGATCTTTCAGTCAACAAGCTAACAGGAG ACATCCCTTATGAGTTCTCAGGCCTTCAAGAACTCACCCTCTTGAACCTCTTCATCAACAATTTCCATGGAGAAATCCCT CATTTCATTGCTGAGCTACCTAAACTGGAGGTGCTGAAGCTCTGGCAGAACAACTTCACTGGAGTGATTCCTCCAAAGCT TGGACACAATGGAAGGTTAACTGAGCTTGACCTTTCAACAAACAAGCTCACAGGACTAGTCCCAAAATCTCTATGCAGTG GAAAGAGGCTGCAGATTTTGATCTTGCTGAGAAACTTTCTGTTTGGATCTTTGCCTGATGAACTTGGTCAATGCTACACA CTCCAAAGAGTTCGTTTGGGTCAAAACTACTTAACTGGTTCACTTCCACATGGTTTCCTTTACTTGCCTGAGCTCTCTCT TTTGGAACTGCAGAACAATTATCTCAGTGGTAAAATTCCACAAGAAACAAGCAAGGCAATTGCACCCTCCAGACTTGGAC AATTGATTCTATCAAACAATAACTTATCAGGTTCTCTGCCAGCTTCAATAGGAAACTTTCCCAACTTGCAAATTCTTCAG CTTAGTGGAAACAGATTCTCAGGTGAAATTCCACCAGATATTGGGAGATTGAAAAACATCATCAAGTTGGATGTGAGTAT GAACAACTTTTCAGGTACTATTCCTCCAGAGATAGGTAACTGTACCTTACTCACATACTTAGATTTAAGCCAAAACCAGC TATTAGGCCCTATCCCAATTCAAGTTACTCAAATTCTTATACTAAATTATCTTAATGTCTCATTGAACCACCTCAATCAA AGCATTCCCAAGGAACTTGGGACCATGAAGGGTTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCAGGTTCAATACC TGAAGGAGGGCAATTTTCAATCTTTAATTCAACATCCTTTGTGGCTAACCCTCAGCTATGTGGATATGAGTTCAATCCAT GCAACCTTTCTTCAACAACAGCAATGGAATCTCAAAGTGCAAAACCTGGAGTAGTCCCTGGGAAATTCAAGCTTCTTTTT GCATTGGCATTGTTGGGATGTTCATTTGTGTTTGCAACCTTAGCCATCATCAAGAGCAGAAAAGCAAGGAAACACTCCAA TTCATGGAAGCTAACATCATTTCAGAAACTGGAATATGGGAGTGAAGACATTGTGGGATGCATAAAGGAAAGCAATGTCA TAGGAAGAGGTGGAGCTGGGGTTGTGTACAGAGGAACCATGCCAAATGGAGAGGAAGTTGCAGTGAAGAAGTTATTAGGA ATCAACAAAGGCTCTTCTCATGACAATGGCCTCTCAGCAGAAATTAAAACATTAGGTAGAATCAGGCACAGGTACATTGT GAGGTTGCTAGCATTTTGTTCAAACAAAGAGACCAATTTGCTTGTTTATGATTACATGCCAAATGGAAGCTTAGGTGAAG TGTTGCATGGGAAGAGGGGTGAGTTTCTGAAATGGGATACTAGGCTGAAAATAGCCACAGAAGCTGCAAAAGGGCTTTGC TATTTGCACCATGATTGTTCCCCTCTGATAATCCATAGGGATGTGAAGTCAAACAACATATTATTGAACTCTGATTTTGA GGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCATGCAAGATACTGGGACTTCAGAGTGCATGTCTTCCATTGCTGGTT CTTATGGCTACATAGCTCCAGGTACTTCAATTTAAAAAGCCAGATAGTTTGAAAAGTGATTATTACTTCAATTATATTAT AACTTCTTTCTTAATCTAATTGGTTAGCAATTGCATCACCAACTTCAAGTTCATGACTCATGAGAGACATTATTACCTAC CATCCCAAAAAAAAAAAAACAGTTCAGAGGGCATTAATGTTTAGATTGCTGATTTGAAAAAGTGAAATGAGTAAAAATCC TAGCATGCAACAACAATAATGGTTAATTCAGGGCTTTTTTTTTTCAATTTAACATCCAAAATCAAATATTGATAGCAAAA TGTTCCATGGATTAAATATACTTTTCATTTATTTTTGTGAAAAAATATTCTTTTCTCACCTTCACCAATGTAGCAACTAG CAAGTACTTGCTCTTTTTCCTAGACTGAGCAAATGCTCCACTAACACAAAGGAAGTTCTTTCAGCTTTTTCTTCATGCGA ACTGAGTAAGTGCCTTTGCTTGCATGCCTTGAAACTACAAACCCCTGATTTTTACCAGAACAAGTTCTTTTTTGACCAGA ACTCCTAATCATATCTTTAACATCCTCAGCCATCAAAATGCACACTAACCAAATGCATATATTTTTCCCCTCAAAGTTTG TGATTGGGATCTAAGATTCACTTTCTCAAAACCCCAGAAAAAAAATGAAGACTTCAAAGGCACTACCACACAAGACATAA CTAGGATATTAACAATTTAATTTATTACTTGGGAGAATTGAAATGAAGCTTTTCCCCTTCTTTATCTATAAAATAATGTT AGGCTAATTTTCCTACCTTAAACTCTTTTACTTGTCAAATTTTTATAATAGGTACCATTTTTTCTTTTGAAATATCTAGA TTATTATACTGTCATGGCTACTTTATTTGTGGAGCAAAAGTAGTGAAAGGTAGCATATTTTTAATTCATTTGACTTTATG TTGCAGAGTATGCATACACATTGAAAGTAGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTCATT ACAGGGCGAAGACCAGTGGGGGACTTTGAGGAAGAAGGACTAGACATTGTTCAATGGACCAAGATGCAAACTAATTGGAA CAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTAAGTCACATTCCTTTAGATGAAGCAGAGCAAGTGTTTTTTGTGG CCATGTTATGTGTTAATGAACACAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTGGCACAAGCAAAGCAA CCAAAACACATTTGAAATGCAGTGA
CDS sequence (LotjaGi6g1v0183400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACTCCTTCTTTCAGTTTTGTGATCACTTGCTTCCTCTTCCTCTTTCTGTTCCTCACTACTAGTCCTGCTTCTGT TTCTTCACTTCCTCTTTCTCTGAGAAACCAAGCTTCTGTATTGGTTTCTCTCAAACAAGGTTTTGAAGCTGCTAACCACT CTTCTTTGAGCAGTTGGAAAATCTCTAACTACTTGTCCCTTTGCACCACATGGCATGGCATTCAGTGTGACCATGATAAT AACATTTCTGTGGTGTCATCACTTGACATATCCAATTTAAACATTTCTGGTTCAGTTTCTGGTATTCATAGGTTACCAAA CCTGAGATTCCTCAACATGTCTAACAACATGTTCAGTGGAAACTTGAGCTGGGAAATTTCACACTTGAAGGAGCTTGAGG TTCTTGATGCTTATAACAATGAGTTCAATGGTTCACTTCCTGAGAGTGTGATTCAACTCCCATGGCTCAAGCACTTGAAT TTTGGAGGGAACTACTTCTCTGGGAAAATCCCTCCAAGCTATGGGAAAATGAGGGGGCTCAACTTTCTGTCTCTTGCAGG AAATGATTTGAGTGGTTTCATACCAAGTGAGATTGGGAATCTCACTAACCTTACCCATCTTTTATTGGGATACTACAATC AATTTGAAGGTGGGATCCCACCTCAATTTGGTGAATTGATCAACTTGGTTCATTTAGACCTTGCAAACTGTGGCTTGAAT GGTTCAATTCCAGCTGAGTTAGGAAAACTCTACAAGCTAGACACACTCTTCTTGCAAACTAATCAGCTCACAGGATCAAT CCCACCTCAGCTAGGAAACTTGACTAGTTTGAAAAATCTTGATCTTTCAGTCAACAAGCTAACAGGAGACATCCCTTATG AGTTCTCAGGCCTTCAAGAACTCACCCTCTTGAACCTCTTCATCAACAATTTCCATGGAGAAATCCCTCATTTCATTGCT GAGCTACCTAAACTGGAGGTGCTGAAGCTCTGGCAGAACAACTTCACTGGAGTGATTCCTCCAAAGCTTGGACACAATGG AAGGTTAACTGAGCTTGACCTTTCAACAAACAAGCTCACAGGACTAGTCCCAAAATCTCTATGCAGTGGAAAGAGGCTGC AGATTTTGATCTTGCTGAGAAACTTTCTGTTTGGATCTTTGCCTGATGAACTTGGTCAATGCTACACACTCCAAAGAGTT CGTTTGGGTCAAAACTACTTAACTGGTTCACTTCCACATGGTTTCCTTTACTTGCCTGAGCTCTCTCTTTTGGAACTGCA GAACAATTATCTCAGTGGTAAAATTCCACAAGAAACAAGCAAGGCAATTGCACCCTCCAGACTTGGACAATTGATTCTAT CAAACAATAACTTATCAGGTTCTCTGCCAGCTTCAATAGGAAACTTTCCCAACTTGCAAATTCTTCAGCTTAGTGGAAAC AGATTCTCAGGTGAAATTCCACCAGATATTGGGAGATTGAAAAACATCATCAAGTTGGATGTGAGTATGAACAACTTTTC AGGTACTATTCCTCCAGAGATAGGTAACTGTACCTTACTCACATACTTAGATTTAAGCCAAAACCAGCTATTAGGCCCTA TCCCAATTCAAGTTACTCAAATTCTTATACTAAATTATCTTAATGTCTCATTGAACCACCTCAATCAAAGCATTCCCAAG GAACTTGGGACCATGAAGGGTTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCAGGTTCAATACCTGAAGGAGGGCA ATTTTCAATCTTTAATTCAACATCCTTTGTGGCTAACCCTCAGCTATGTGGATATGAGTTCAATCCATGCAACCTTTCTT CAACAACAGCAATGGAATCTCAAAGTGCAAAACCTGGAGTAGTCCCTGGGAAATTCAAGCTTCTTTTTGCATTGGCATTG TTGGGATGTTCATTTGTGTTTGCAACCTTAGCCATCATCAAGAGCAGAAAAGCAAGGAAACACTCCAATTCATGGAAGCT AACATCATTTCAGAAACTGGAATATGGGAGTGAAGACATTGTGGGATGCATAAAGGAAAGCAATGTCATAGGAAGAGGTG GAGCTGGGGTTGTGTACAGAGGAACCATGCCAAATGGAGAGGAAGTTGCAGTGAAGAAGTTATTAGGAATCAACAAAGGC TCTTCTCATGACAATGGCCTCTCAGCAGAAATTAAAACATTAGGTAGAATCAGGCACAGGTACATTGTGAGGTTGCTAGC ATTTTGTTCAAACAAAGAGACCAATTTGCTTGTTTATGATTACATGCCAAATGGAAGCTTAGGTGAAGTGTTGCATGGGA AGAGGGGTGAGTTTCTGAAATGGGATACTAGGCTGAAAATAGCCACAGAAGCTGCAAAAGGGCTTTGCTATTTGCACCAT GATTGTTCCCCTCTGATAATCCATAGGGATGTGAAGTCAAACAACATATTATTGAACTCTGATTTTGAGGCTCATGTTGC TGATTTTGGGCTTGCCAAGTTCATGCAAGATACTGGGACTTCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGCTACA TAGCTCCAGAGTATGCATACACATTGAAAGTAGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTC ATTACAGGGCGAAGACCAGTGGGGGACTTTGAGGAAGAAGGACTAGACATTGTTCAATGGACCAAGATGCAAACTAATTG GAACAAAGAGATGGTGATGAAGATCCTTGATGAGAGGCTAAGTCACATTCCTTTAGATGAAGCAGAGCAAGTGTTTTTTG TGGCCATGTTATGTGTTAATGAACACAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTGGCACAAGCAAAG CAACCAAAACACATTTGA
Protein sequence (LotjaGi6g1v0183400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATPSFSFVITCFLFLFLFLTTSPASVSSLPLSLRNQASVLVSLKQGFEAANHSSLSSWKISNYLSLCTTWHGIQCDHDN NISVVSSLDISNLNISGSVSGIHRLPNLRFLNMSNNMFSGNLSWEISHLKELEVLDAYNNEFNGSLPESVIQLPWLKHLN FGGNYFSGKIPPSYGKMRGLNFLSLAGNDLSGFIPSEIGNLTNLTHLLLGYYNQFEGGIPPQFGELINLVHLDLANCGLN GSIPAELGKLYKLDTLFLQTNQLTGSIPPQLGNLTSLKNLDLSVNKLTGDIPYEFSGLQELTLLNLFINNFHGEIPHFIA ELPKLEVLKLWQNNFTGVIPPKLGHNGRLTELDLSTNKLTGLVPKSLCSGKRLQILILLRNFLFGSLPDELGQCYTLQRV RLGQNYLTGSLPHGFLYLPELSLLELQNNYLSGKIPQETSKAIAPSRLGQLILSNNNLSGSLPASIGNFPNLQILQLSGN RFSGEIPPDIGRLKNIIKLDVSMNNFSGTIPPEIGNCTLLTYLDLSQNQLLGPIPIQVTQILILNYLNVSLNHLNQSIPK ELGTMKGLTSADFSHNNFSGSIPEGGQFSIFNSTSFVANPQLCGYEFNPCNLSSTTAMESQSAKPGVVPGKFKLLFALAL LGCSFVFATLAIIKSRKARKHSNSWKLTSFQKLEYGSEDIVGCIKESNVIGRGGAGVVYRGTMPNGEEVAVKKLLGINKG SSHDNGLSAEIKTLGRIRHRYIVRLLAFCSNKETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIATEAAKGLCYLHH DCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLEL ITGRRPVGDFEEEGLDIVQWTKMQTNWNKEMVMKILDERLSHIPLDEAEQVFFVAMLCVNEHSVERPTMREVVEMLAQAK QPKHI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 29 | 29 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| Phobius | 21 | 29 | 9 | - | – | |
| Phobius | 30 | 633 | 604 | - | – | |
| Gene3D | 31 | 193 | 163 | 1.1E-36 | ||
| Pfam | 36 | 77 | 42 | 7.9E-6 | ||
| SUPERFAMILY | 87 | 406 | 320 | 6.12E-61 | – | |
| PANTHER | 104 | 960 | 857 | 0.0 | – | |
| PANTHER | 104 | 960 | 857 | 0.0 | – | |
| SMART | 105 | 128 | 24 | 410.0 | ||
| SMART | 129 | 153 | 25 | 150.0 | ||
| SMART | 177 | 201 | 25 | 240.0 | ||
| Gene3D | 194 | 294 | 101 | 1.5E-31 | ||
| SMART | 226 | 250 | 25 | 110.0 | ||
| SMART | 274 | 297 | 24 | 110.0 | ||
| SMART | 322 | 346 | 25 | 40.0 | ||
| Gene3D | 322 | 614 | 293 | 1.0E-84 | ||
| Pfam | 323 | 381 | 59 | 1.1E-6 | ||
| SUPERFAMILY | 347 | 609 | 263 | 4.85E-52 | – | |
| SMART | 347 | 369 | 23 | 120.0 | ||
| SMART | 418 | 442 | 25 | 130.0 | ||
| SMART | 469 | 493 | 25 | 14.0 | ||
| TMHMM | 634 | 653 | 20 | - | – | |
| Phobius | 634 | 653 | 20 | - | – | |
| Gene3D | 652 | 761 | 110 | 1.3E-22 | – | |
| Phobius | 654 | 965 | 312 | - | – | |
| SUPERFAMILY | 679 | 956 | 278 | 2.97E-74 | ||
| ProSiteProfiles | 684 | 965 | 282 | 37.404 | ||
| SMART | 684 | 956 | 273 | 1.3E-34 | ||
| Pfam | 686 | 954 | 269 | 2.0E-46 | ||
| Gene3D | 762 | 964 | 203 | 7.2E-61 | – | |
| ProSitePatterns | 806 | 818 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0183400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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