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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0199900 |
| Transcript ID | LotjaGi6g1v0199900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A0B2QIT1|A0A0B2QIT1_GLYSO Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi6g1v0199900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49642078..49647010) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGAGCTGTCATTACAGCTGTCACATAACTGATTCTGTTAGAGTTGGTGGCTTGCTTAGCAAGCCTTGTATTCTCTAT AAATACTGAGATCACTCATTGTAATCTTTAGCTTTTTCAATAATGAAATTCAGTTACATATCTTAGAGAGTTTAACATGG TATCAGAGCGCTGAACGATCCTTGGGATCTTTCTCTCTGATTTTTCTCGCTTTTTCCTCTTCTTCTTCATCATCACCATG GCTGATGACGCTTCTGCACCTGCAACTGCAGCTGCAACTGCAGCTGCAACTCCAGTTCCGCTTGCGGTTGCTCAACCGCA ACTGAGTTCTACTTCTCTAGTTCACAAGCTTATCCTGAAGCTTGATGATTCTAACTTCCTTTCATGGAAGCAGCACGTTG AAGGCATCGTGCGCACGCACAGGTTGCAGAGCTTTCTTGCTCATCCAGAGATTCCACCTCGCTGGCTCAGTGAGGATGAT CGTGTGAATGCAGTGGAAAATCCTGCATATCAGATCTGGGAACAACAAGATTCTGCACTGTTTACATGGCTTCTCTCGTC TCTTTCTCCATCAGTGCTTCCAACCGTGGTCAACTGCACTCAGTCTTGGCAGATTTGGGAAGCAGTGCTCGACTTCTTCC AAGCACAATCGCTTGCTCAATCCACGCAACTACGTTCCGAGTTGCGATCGATAACCAAGGGCTCGAAGACTTCATCGGAG TTTCTCAAGAGAATCAAGTCCATTGTGAACGCGCTTGTCTCCATCGGAGATCCAGTTACCTATCGCGAGCACCTTGAGGC TATTTTCGACGGTCTTCCTGAGGATTACAGTCATCTCTTGGCTGTAATCTACAATCGCGATGATCGCTGCTCGATCTCGC ATGTTGAATCCATGGTTATCGCGCATGAAGCGCGCCTTGAGCGTTCTCGCACTCGTCAGATGAGTGCAAATCCTCCGTCA GCGCTTCTCGCTCAGGCTGCGCCACCGCCAACGCCTCCAGCGCCGCCATCGCCAGCGCCGACACCATCGTCGACTGTCTC TACACAGTCGACTGCATCCTCAGAAGCTAACTATGCTTCTAGTGCTGTCAACAACTCTTACGATGATCGATCTTATGATA ATCGTGGTGGATATGATGATTCTCGTTCTCGCGGTGGTTATGGTGGTAGATCTGGTGGTCGTAACTCTCGTGGTGGAAGA AACGGTAATCGTAGTGGTGTTCAATGCCAGATCTGTTACAAGTATGGACATGATGCTAGCATCTGCTATCATCGTGGTTC ATCAGGATCCAGTGGCTCGTTTGGTATGCAATCTTCTGGTTATGGCATGCCTATGCCTATGCATCCACAAATGCTCCCAC ACTTTGGATTCTCACCTTTCTATGGTGTTCCACAATTTGGAAATCCTACTCAGTTTGGTAATTCTCAGTTTGGACATCTT CCTGGCATGATGTTAGGCCAGTATCCTCATAATTCAGGCATGAACATGAGCAACTTTGCTCAGTCCTTTGGTCATTCCCC TTATGGTGGTGCACAGTGGCATCCTACACCTGCACAATTTCCTGGTGGCAATCCTAGGCCTGCAAATCCTCCAGCCAGAG CTCCACAGGCTATGCTTACTGGTCCTACTACTTCTCCTGCTGCAGCAAATCTCAGCTCCTGGTTTCCTGACTCTGGAGCA ACACATCATGTTACCAATGATGCATCTGTGATTTCTGATAGTGTCTCTCTCACTGGTACTGATCACATTCTAATGGGGAA TGGACAAGGTTTGCCAATCCACTCTATTGGTTCAGCTTCTTTTCCTTCTCCTTATCACAAAAATACTACACTCACTCTTA GTGATCTTCTTTTAGTTCCTAATATCACAAAGAATCTAGTCAGTGTTAGTAAATTTGCAAAGGATAATAATGTCTATTTT GAGTTTCACTCATCCTATTGTGTTGTGAAATCTCAGGAAACTTCTAGAGTTCTACTCAAGGGTACTGTTGGTCCAGATGG TCTATACATCTTTGAGGGGATGCATACTCCAACTTTTCCTCCAGCCAGTTCTGTTAAAGCTTCCTCAGTTCCAATTCCAG TTGTTGTTTCCTCTGTTAATACTGCTTCTTTACCTATTTCTAATATACCTAGTCCTACCTCTGATGTAACTACTACTTCT TATGCCTTGTGGCACAATAGGCTAGGTCATCCTCATCATGAGGCTTTGCATTCTGCTTTAACTGTTTGTAAGATACCAGT ACCTAATAAAGCAAAGTTTTCAGTATGTTCAGCTTGTTGTTTGGCAAAGTCTCACAAATTACCTTCTTCTTCCTCTCATA CTGTTTATACTGCACCTCTAGAACTTGTCTTTGCTGATCTATGGGGTCCTGCCTCTACTGTTTCTTCATGTGGATATTCT TATTTTTTGACTTGTGTGGATGCTTATTCTAGGTTCACTTGGATTTTTCCCCTAAGACAAAAATCTGAAACCTATTCTGT TTTTCTTCAGTTTCAAGCCATGGTTGAATTAAAGTTTAGCTTGAAACTGAAATCTGTCCAAACAGATAATGGTACTGAGT TCAAACCTCTTACCCCTCATTTTACCAAACTTGGCATTGTCCATAGGCTCACTTGCCCCTACACACACCATCAAAATGGT AGTGTTGAAAGGAAGCATAGACATATCATAGAAACTGGTTTATCTTTGCTGGCTTATGCTAACATGCCATCCCAATACTG GGATCATGCTTTCTTGGCTGCTGTTTTTCTAATTAATAGGCTTCCTACTGTGGTTTTGGGCAATGAGAGTCCTTATTCTA AGTTGTTTAAGACTCTCCCTGATTATAAGATTCTCAAAGTGTTTGGCTGTGCCTGTTACCCTCATTTAAGACCTTACACT CACAACAAGCTCTCCTTGAGGTCTAAGGAATGTGTGTTTATTGGATATTCTTCCTCTCATCAAGGGTACAAATGCATGGA CAGTGATGGCAGAATTTTTATCTCTCGAGATGTGATTTTTGATGAAGTGAAGTTTCCTTATCCTGCCATGTTTACCTCCA CTGACTCTGACCTCCCAGATAGTGGCATTCTTTCAACAATACCTATTGTTCCAGTTCCAGTTGCTGCTCAGCCTACAACC TCCAATTCAGACTCTGATTTGTCTTCAGGACCTGTCTCTCTGGCTCAGGTTTCTGCACAAGAGCAAGTCCAAGCTTCTCC TGCAGCCTCAGGCACAGCTTCAGCACCCTCTTCTCCTGTTGGGCCTTCACCTCCAGTGGGCAATATTCATCCTATGCAGA CAAGAGCAAAATCTGGCATAATCATGCCCAGATTGCATCCAACCTTGCTCCTCACTCAGGCAGAACCTACTACAGCCAAG CAAGCACTCAAAGACCCTAAGTGGTTGGCAGCCATGAAGGCTGAGTATAATGCATTACTAGCTAATGATACCTGGACATT GGTTCCTCTACCCAAAGATCGGACACCAATAGGATGCAAATGGGTGTTTAGAGTGAAGGAGAATGCTGATGGTTCTATCA ATAGATATAAAGCAAGGCTTGTAGCCAAAGGTTATCATCAAGTGAAGGGTTTTGATTATTCTGAGACATTTTCCCCTGTG GTCAAACCTGTTACTATTAGGCTCATTCTTTCTCTTGCAATCACTAAACAGTGGCATATTCATCAGCTTGATGTCAATAA TGCCTTTCTCAATGGTGCACTTCAGGAGGAGGTGTACATGACACAACCTTCTGGATTTCAGAATGAGGATAAGACTCTTG TTTGCAAGTTGAACAAAGCTCTCTATGGCCTCAAACAGGCCCCTAGAGCTTGGTTTGAAAGGTTAAAGTCAGCTCTTGTG AAGTATGGCTTCAAACCTAGTAGATGTGACCCATCTTTGTTCACTTTCCACAATGCAACTTGCTGCATTTACATCCTAGT CTATGTAGATGATATCATCATTACAGGCAACTCTTTGCCTCTTGTGCAGAAAGTGGTTGAGAATCTCAATTCTGAGTTCT CTTTGAAGCAGCTAGGACTGCTAGATTATTTCCTTGGTGTTCAGGTGCATCATCTTCAGGACAGGTCATTATTGTTGACC CAGACAAAGTACATTACTGATCTCCTTGAAAGAGCAGATATGGGAGAAGCAAAGGGCATCTCTACTCCTATGGTTGGTGG TGCCAAATTGAGCAAATATGGAGCAGAGTACTTTGCTGATCCTACCCTTTACAGATCCATTGTAGGAGCACTTCAATATG CCACCTTAACCAGACCTGAGATAAGCTTTGCTGTGAACAAAGTTTGTCAATTTCTAAGTCAGCCATTGGAAGATCATTGG AAGGCTGTTAAGAGAATATTAAGGTATCTTAAGGGTACTCTTCATCATGGGCTGCATCTTAAGCCTTGTTCTCTTCATTC TCCTGTTTCTCTAGTGGCCTTTTGTGATGCTGATTGGGCATCAGATCCTGATGACAGAAGGTCAACATCAGGATCATGTG TTTTCTTTGGCCCTAATCTTGTGTCTTGGAGCTCCAAGAAGCAGACCTTAGTGGCTCGTTCCAGTACTGAAGCAGAATAC AGAAGCCTAGCCAATACCTCTGCTGAGCTGCTATGGGTTCAGTCACTTTTGCAGGAGTTGCAGATTCCTTTTTCTCCTCC TACAATCTTTTGTGACAACATGGGTGCAGTGGCTTTGACCCATAATCCAGTTCTACACACCCGCACTAAACACATGGAGC TTGACATCTTCTTTGTGAGGGAAAAAGTTCTCAACAAGTCTCTTTTTGTGCATCACATTCCTTCAGTTGATCAACTGGCA GATCTCTTTACAAAGGCTCTTTCACCTCTTCGTTTTGAAACTCTTCGTGACAAACTCAATGTGATTGAGAAATCCATTTC TCACCCACCTTGAGTTTGAGGGGGCCTATTAGAGTAGAGTACACATTACTCTG
CDS sequence (LotjaGi6g1v0199900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATGACGCTTCTGCACCTGCAACTGCAGCTGCAACTGCAGCTGCAACTCCAGTTCCGCTTGCGGTTGCTCAACC GCAACTGAGTTCTACTTCTCTAGTTCACAAGCTTATCCTGAAGCTTGATGATTCTAACTTCCTTTCATGGAAGCAGCACG TTGAAGGCATCGTGCGCACGCACAGGTTGCAGAGCTTTCTTGCTCATCCAGAGATTCCACCTCGCTGGCTCAGTGAGGAT GATCGTGTGAATGCAGTGGAAAATCCTGCATATCAGATCTGGGAACAACAAGATTCTGCACTGTTTACATGGCTTCTCTC GTCTCTTTCTCCATCAGTGCTTCCAACCGTGGTCAACTGCACTCAGTCTTGGCAGATTTGGGAAGCAGTGCTCGACTTCT TCCAAGCACAATCGCTTGCTCAATCCACGCAACTACGTTCCGAGTTGCGATCGATAACCAAGGGCTCGAAGACTTCATCG GAGTTTCTCAAGAGAATCAAGTCCATTGTGAACGCGCTTGTCTCCATCGGAGATCCAGTTACCTATCGCGAGCACCTTGA GGCTATTTTCGACGGTCTTCCTGAGGATTACAGTCATCTCTTGGCTGTAATCTACAATCGCGATGATCGCTGCTCGATCT CGCATGTTGAATCCATGGTTATCGCGCATGAAGCGCGCCTTGAGCGTTCTCGCACTCGTCAGATGAGTGCAAATCCTCCG TCAGCGCTTCTCGCTCAGGCTGCGCCACCGCCAACGCCTCCAGCGCCGCCATCGCCAGCGCCGACACCATCGTCGACTGT CTCTACACAGTCGACTGCATCCTCAGAAGCTAACTATGCTTCTAGTGCTGTCAACAACTCTTACGATGATCGATCTTATG ATAATCGTGGTGGATATGATGATTCTCGTTCTCGCGGTGGTTATGGTGGTAGATCTGGTGGTCGTAACTCTCGTGGTGGA AGAAACGGTAATCGTAGTGGTGTTCAATGCCAGATCTGTTACAAGTATGGACATGATGCTAGCATCTGCTATCATCGTGG TTCATCAGGATCCAGTGGCTCGTTTGGTATGCAATCTTCTGGTTATGGCATGCCTATGCCTATGCATCCACAAATGCTCC CACACTTTGGATTCTCACCTTTCTATGGTGTTCCACAATTTGGAAATCCTACTCAGTTTGGTAATTCTCAGTTTGGACAT CTTCCTGGCATGATGTTAGGCCAGTATCCTCATAATTCAGGCATGAACATGAGCAACTTTGCTCAGTCCTTTGGTCATTC CCCTTATGGTGGTGCACAGTGGCATCCTACACCTGCACAATTTCCTGGTGGCAATCCTAGGCCTGCAAATCCTCCAGCCA GAGCTCCACAGGCTATGCTTACTGGTCCTACTACTTCTCCTGCTGCAGCAAATCTCAGCTCCTGGTTTCCTGACTCTGGA GCAACACATCATGTTACCAATGATGCATCTGTGATTTCTGATAGTGTCTCTCTCACTGGTACTGATCACATTCTAATGGG GAATGGACAAGGTTTGCCAATCCACTCTATTGGTTCAGCTTCTTTTCCTTCTCCTTATCACAAAAATACTACACTCACTC TTAGTGATCTTCTTTTAGTTCCTAATATCACAAAGAATCTAGTCAGTGTTAGTAAATTTGCAAAGGATAATAATGTCTAT TTTGAGTTTCACTCATCCTATTGTGTTGTGAAATCTCAGGAAACTTCTAGAGTTCTACTCAAGGGTACTGTTGGTCCAGA TGGTCTATACATCTTTGAGGGGATGCATACTCCAACTTTTCCTCCAGCCAGTTCTGTTAAAGCTTCCTCAGTTCCAATTC CAGTTGTTGTTTCCTCTGTTAATACTGCTTCTTTACCTATTTCTAATATACCTAGTCCTACCTCTGATGTAACTACTACT TCTTATGCCTTGTGGCACAATAGGCTAGGTCATCCTCATCATGAGGCTTTGCATTCTGCTTTAACTGTTTGTAAGATACC AGTACCTAATAAAGCAAAGTTTTCAGTATGTTCAGCTTGTTGTTTGGCAAAGTCTCACAAATTACCTTCTTCTTCCTCTC ATACTGTTTATACTGCACCTCTAGAACTTGTCTTTGCTGATCTATGGGGTCCTGCCTCTACTGTTTCTTCATGTGGATAT TCTTATTTTTTGACTTGTGTGGATGCTTATTCTAGGTTCACTTGGATTTTTCCCCTAAGACAAAAATCTGAAACCTATTC TGTTTTTCTTCAGTTTCAAGCCATGGTTGAATTAAAGTTTAGCTTGAAACTGAAATCTGTCCAAACAGATAATGGTACTG AGTTCAAACCTCTTACCCCTCATTTTACCAAACTTGGCATTGTCCATAGGCTCACTTGCCCCTACACACACCATCAAAAT GGTAGTGTTGAAAGGAAGCATAGACATATCATAGAAACTGGTTTATCTTTGCTGGCTTATGCTAACATGCCATCCCAATA CTGGGATCATGCTTTCTTGGCTGCTGTTTTTCTAATTAATAGGCTTCCTACTGTGGTTTTGGGCAATGAGAGTCCTTATT CTAAGTTGTTTAAGACTCTCCCTGATTATAAGATTCTCAAAGTGTTTGGCTGTGCCTGTTACCCTCATTTAAGACCTTAC ACTCACAACAAGCTCTCCTTGAGGTCTAAGGAATGTGTGTTTATTGGATATTCTTCCTCTCATCAAGGGTACAAATGCAT GGACAGTGATGGCAGAATTTTTATCTCTCGAGATGTGATTTTTGATGAAGTGAAGTTTCCTTATCCTGCCATGTTTACCT CCACTGACTCTGACCTCCCAGATAGTGGCATTCTTTCAACAATACCTATTGTTCCAGTTCCAGTTGCTGCTCAGCCTACA ACCTCCAATTCAGACTCTGATTTGTCTTCAGGACCTGTCTCTCTGGCTCAGGTTTCTGCACAAGAGCAAGTCCAAGCTTC TCCTGCAGCCTCAGGCACAGCTTCAGCACCCTCTTCTCCTGTTGGGCCTTCACCTCCAGTGGGCAATATTCATCCTATGC AGACAAGAGCAAAATCTGGCATAATCATGCCCAGATTGCATCCAACCTTGCTCCTCACTCAGGCAGAACCTACTACAGCC AAGCAAGCACTCAAAGACCCTAAGTGGTTGGCAGCCATGAAGGCTGAGTATAATGCATTACTAGCTAATGATACCTGGAC ATTGGTTCCTCTACCCAAAGATCGGACACCAATAGGATGCAAATGGGTGTTTAGAGTGAAGGAGAATGCTGATGGTTCTA TCAATAGATATAAAGCAAGGCTTGTAGCCAAAGGTTATCATCAAGTGAAGGGTTTTGATTATTCTGAGACATTTTCCCCT GTGGTCAAACCTGTTACTATTAGGCTCATTCTTTCTCTTGCAATCACTAAACAGTGGCATATTCATCAGCTTGATGTCAA TAATGCCTTTCTCAATGGTGCACTTCAGGAGGAGGTGTACATGACACAACCTTCTGGATTTCAGAATGAGGATAAGACTC TTGTTTGCAAGTTGAACAAAGCTCTCTATGGCCTCAAACAGGCCCCTAGAGCTTGGTTTGAAAGGTTAAAGTCAGCTCTT GTGAAGTATGGCTTCAAACCTAGTAGATGTGACCCATCTTTGTTCACTTTCCACAATGCAACTTGCTGCATTTACATCCT AGTCTATGTAGATGATATCATCATTACAGGCAACTCTTTGCCTCTTGTGCAGAAAGTGGTTGAGAATCTCAATTCTGAGT TCTCTTTGAAGCAGCTAGGACTGCTAGATTATTTCCTTGGTGTTCAGGTGCATCATCTTCAGGACAGGTCATTATTGTTG ACCCAGACAAAGTACATTACTGATCTCCTTGAAAGAGCAGATATGGGAGAAGCAAAGGGCATCTCTACTCCTATGGTTGG TGGTGCCAAATTGAGCAAATATGGAGCAGAGTACTTTGCTGATCCTACCCTTTACAGATCCATTGTAGGAGCACTTCAAT ATGCCACCTTAACCAGACCTGAGATAAGCTTTGCTGTGAACAAAGTTTGTCAATTTCTAAGTCAGCCATTGGAAGATCAT TGGAAGGCTGTTAAGAGAATATTAAGGTATCTTAAGGGTACTCTTCATCATGGGCTGCATCTTAAGCCTTGTTCTCTTCA TTCTCCTGTTTCTCTAGTGGCCTTTTGTGATGCTGATTGGGCATCAGATCCTGATGACAGAAGGTCAACATCAGGATCAT GTGTTTTCTTTGGCCCTAATCTTGTGTCTTGGAGCTCCAAGAAGCAGACCTTAGTGGCTCGTTCCAGTACTGAAGCAGAA TACAGAAGCCTAGCCAATACCTCTGCTGAGCTGCTATGGGTTCAGTCACTTTTGCAGGAGTTGCAGATTCCTTTTTCTCC TCCTACAATCTTTTGTGACAACATGGGTGCAGTGGCTTTGACCCATAATCCAGTTCTACACACCCGCACTAAACACATGG AGCTTGACATCTTCTTTGTGAGGGAAAAAGTTCTCAACAAGTCTCTTTTTGTGCATCACATTCCTTCAGTTGATCAACTG GCAGATCTCTTTACAAAGGCTCTTTCACCTCTTCGTTTTGAAACTCTTCGTGACAAACTCAATGTGATTGAGAAATCCAT TTCTCACCCACCTTGA
Protein sequence (LotjaGi6g1v0199900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADDASAPATAAATAAATPVPLAVAQPQLSSTSLVHKLILKLDDSNFLSWKQHVEGIVRTHRLQSFLAHPEIPPRWLSED DRVNAVENPAYQIWEQQDSALFTWLLSSLSPSVLPTVVNCTQSWQIWEAVLDFFQAQSLAQSTQLRSELRSITKGSKTSS EFLKRIKSIVNALVSIGDPVTYREHLEAIFDGLPEDYSHLLAVIYNRDDRCSISHVESMVIAHEARLERSRTRQMSANPP SALLAQAAPPPTPPAPPSPAPTPSSTVSTQSTASSEANYASSAVNNSYDDRSYDNRGGYDDSRSRGGYGGRSGGRNSRGG RNGNRSGVQCQICYKYGHDASICYHRGSSGSSGSFGMQSSGYGMPMPMHPQMLPHFGFSPFYGVPQFGNPTQFGNSQFGH LPGMMLGQYPHNSGMNMSNFAQSFGHSPYGGAQWHPTPAQFPGGNPRPANPPARAPQAMLTGPTTSPAAANLSSWFPDSG ATHHVTNDASVISDSVSLTGTDHILMGNGQGLPIHSIGSASFPSPYHKNTTLTLSDLLLVPNITKNLVSVSKFAKDNNVY FEFHSSYCVVKSQETSRVLLKGTVGPDGLYIFEGMHTPTFPPASSVKASSVPIPVVVSSVNTASLPISNIPSPTSDVTTT SYALWHNRLGHPHHEALHSALTVCKIPVPNKAKFSVCSACCLAKSHKLPSSSSHTVYTAPLELVFADLWGPASTVSSCGY SYFLTCVDAYSRFTWIFPLRQKSETYSVFLQFQAMVELKFSLKLKSVQTDNGTEFKPLTPHFTKLGIVHRLTCPYTHHQN GSVERKHRHIIETGLSLLAYANMPSQYWDHAFLAAVFLINRLPTVVLGNESPYSKLFKTLPDYKILKVFGCACYPHLRPY THNKLSLRSKECVFIGYSSSHQGYKCMDSDGRIFISRDVIFDEVKFPYPAMFTSTDSDLPDSGILSTIPIVPVPVAAQPT TSNSDSDLSSGPVSLAQVSAQEQVQASPAASGTASAPSSPVGPSPPVGNIHPMQTRAKSGIIMPRLHPTLLLTQAEPTTA KQALKDPKWLAAMKAEYNALLANDTWTLVPLPKDRTPIGCKWVFRVKENADGSINRYKARLVAKGYHQVKGFDYSETFSP VVKPVTIRLILSLAITKQWHIHQLDVNNAFLNGALQEEVYMTQPSGFQNEDKTLVCKLNKALYGLKQAPRAWFERLKSAL VKYGFKPSRCDPSLFTFHNATCCIYILVYVDDIIITGNSLPLVQKVVENLNSEFSLKQLGLLDYFLGVQVHHLQDRSLLL TQTKYITDLLERADMGEAKGISTPMVGGAKLSKYGAEYFADPTLYRSIVGALQYATLTRPEISFAVNKVCQFLSQPLEDH WKAVKRILRYLKGTLHHGLHLKPCSLHSPVSLVAFCDADWASDPDDRRSTSGSCVFFGPNLVSWSSKKQTLVARSSTEAE YRSLANTSAELLWVQSLLQELQIPFSPPTIFCDNMGAVALTHNPVLHTRTKHMELDIFFVREKVLNKSLFVHHIPSVDQL ADLFTKALSPLRFETLRDKLNVIEKSISHPP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 25 | 9 | - | – | |
| Phobius | 26 | 1551 | 1526 | - | – | |
| Pfam | 94 | 228 | 135 | 3.8E-19 | – | |
| MobiDBLite | 230 | 324 | 95 | - | – | |
| MobiDBLite | 244 | 263 | 20 | - | – | |
| MobiDBLite | 264 | 292 | 29 | - | – | |
| PANTHER | 417 | 1158 | 742 | 1.8E-116 | – | |
| PANTHER | 417 | 1158 | 742 | 1.8E-116 | – | |
| Pfam | 636 | 685 | 50 | 7.4E-10 | ||
| Gene3D | 692 | 868 | 177 | 6.1E-29 | ||
| ProSiteProfiles | 696 | 860 | 165 | 21.759 | ||
| Pfam | 698 | 810 | 113 | 9.7E-15 | ||
| SUPERFAMILY | 698 | 869 | 172 | 1.46E-35 | ||
| MobiDBLite | 956 | 998 | 43 | - | – | |
| MobiDBLite | 956 | 1013 | 58 | - | – | |
| SUPERFAMILY | 1063 | 1498 | 436 | 2.37E-39 | ||
| Pfam | 1064 | 1305 | 242 | 2.4E-75 | ||
| CDD | 1393 | 1530 | 138 | 1.99086E-71 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Biological process | DNA integration | The process in which a segment of DNA is incorporated into another, usually larger, DNA molecule such as a chromosome. |
Expression pattern of LotjaGi6g1v0199900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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