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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0207100 |
| Transcript ID | LotjaGi6g1v0207100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT5G51350.1 Leucine-rich repeat transmembrane protein kinase family protein; Swiss-Prot: sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR; TrEMBL-Plants: tr|A0A0B2QGS0|A0A0B2QGS0_GLYSO Leucine-rich repeat receptor-like protein kinase TDR; Found in the gene: LotjaGi6g1v0207100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50461127..50466394) extracted from Lotus japonicus Gifu genome v1.2.
CACAAGGTATACCCACAATACATCACTCGATACAGAAATTTTTGCTTTCCGTCCAACCAAAAAAGGCCATGCAACAGTGA CCTTTATGATCTCCATACAAGGACATGGATATGGGCGAATTTTATCCATGTCCCACAGTGCACAGAGTAAAGATAAAAGC ATTTGAATTAGCCATGACGTCTCTTACCTAATGAAAAGTTAGTAAAAGTTAATCTCAGATTTGAAGGCTTTATTCCCTAA TGGCAAACATCATTCAAATAAATAAACACAGCAGGGTCCCCTCTTGCTCTCAAAAGCAACCCAATAATATTCTTGAACCA CCTAATCAATCAGAATAGTACTCATTCTCTTTTTTCATAGGTACAGTGCCATTTCCTTTCTCTATTCCCCATGCATTCCT CAAACAAAACAAATATACATTTAACTTATTTTATACTGACACCATTGCCTTTGTTTGTTCGGGGTAGTTACAATTGTCCC TCTCCATCTCCCTCTTCAAGTTCCAATGGAGATTTTCAAATGCTTCTTCTACTTTAATCTTCTCACTACTTTCATGTTAT CAGCAGTTTTAGCCATAGACCCTTATTCAGAGGCACTCCTGAGTCTCAAATCTGAACTTGTAGATGATGATAATAGTTTG CATGACTGGGTAGTGCCCTCTGGAGGGAACTTAACTGGAAAATCCTATGCATGTTCTTGGTCTGGAATCAAGTGTAACAA AGACTCAACAATTGTAACTTCCATAGACCTGTCCATGAAGAAACTTGGTGGTGAATTATCAGGGAAGCAATTTGCCATCT TCACAAAGCTTGTTGATCTTAACCTGAGCCACAATTTCTTCTCTGGAAAGCTGCCAGCAGAAATTTTTAACCTCACCAGC CTAAAGAGCTTGGATATCAGCAGGAATAATTTTTCAGGTACCTTCCCTGGAGGAATTCACAGCCTCCAAGATTTGGCTGT GCTTGATGCCTTCAGCAACAGCTTTTCAGGGTCTCTTCCTGCAGAATTTTCACAGCTAGAACAGCTTAAAGTTCTTAATC TTGCTGGGAGTTACTTCAGAGGATCAATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTCCATCTTGCAGGA AATTCTCTCACAGGAAGCATACCTCCGGAACTGGGTAACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACTTATA CCAGGGTTTCATTCCACCCCAGCTAGGTAATATGAGCCAGCTTCAGTATCTTGACATGGCAGGTGCAAATCTTTCTGGTC CAATACCAAAGGAGCTCTCCAATCTCACCAGTTTGCAATCACTTTTTCTGTTCAGAAACCAGCTCACTGGATCAATACCA AGTGAGTTAAGCAAAATCAAACCTCTCACAGATTTAGATCTCTCTGATAACTTCCTTTCAGGATCCATTCCTGAAAGCTT CTCAGAGCTGAAGAACCTGAGACTGCTTAGTGTCATGTACAATGACATGAGTGGCTCTGTTCCTGAAGGCATTGCAGAAC TCCCATCCTTGGAAACTCTTCTCATTTGGACCAATCGCTTCTCTGGTTCGCTCCCACGGAGCCTAGGCAGGAATTCCAAG CTCAAATGGGTGGATGTCTCCACAAACAATTTCATTGGCAGCATACCAGAAGACATTTGTGTGAGTGGAGTACTATCTAA GCTGATCCTGTTTTCAAACAAATTCACAGGTGGTCTTTCATCAATCTCCAACTGTTCTTCCCTTGTTCGTCTTCGTCTAG AAAATAATTCTTTCTCAGGAGAGATCCGTTTAAAATTCAGCCATCTTCCTGATATCTCATACATCGATCTGTCCAGAAAC AATTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCAACTCAACTGGAGTATCTCAATGTGTCTTATAATCTGCAATT AGGAGGCACCATCCCATCACAAATGTTGTCTTTGCCCCTGCTTCAAAATTTGTCAGCATCTTCTTGTGGTATTAAAGGCG ATCTTCCGCCATTTGCGTCCTGCAAATCAATTTCAGTCATTGATCTTGATAGGAACAACTTATCCGGAATCATCCCAAAC AGTGTTTCCAAATGTCAAGCTCTTGAAAAAATCAATTTATCAGACAATGATCTGATAGGTCAAATTCCTGAGGAGCTAGC CAGTATCCCTGTTATTGGTGTAGTAGACTTATCTAACAATAAGTTCAGTGGCAACATACCTGCAAAGTTTGGTAGTTCTT CAAATTTGCAACTCCTCAATGTGTCTTTCAACAATATCTCCGGTTCAATACCCACAGGGAAGTCATTCAAATTAATGAGT AGCAGTGCATTTGAAGGAAATTCAGAGCTATGTGGAGCACCTCTAAAGCCATGTCCTGATTCAGTTGGAATATTGGGCAG CAAGGGCACACGGAAGCTTACACGTATTCTGCTACTCACTGCGGGGTTGATAATAATCTTTCTAGGAATGGCTTTTGGAG TGCTTTATTTCAGAAAGGCAGTTAAAAGTCAATGGCAGATGGTTTCATTTGTTGGACTACCTCAATTCACAGCAAATGAT GTTTTGACAAGCTTGATTGCCACAAAACAAACAGAAGTCCCATCACCATCACCTGCAGTTACAAAGGCAGTTCTTCCTAC GGGTATAACAGTTTTAGTCCAGAAGATTGAATGGGAAAAAAGGAGCATTAAGGTGGTGTCACAATTTATAATGCAACTAG GAAATGCAAGGCACAAGAATTTAATCAGACTGTTGGGTTTTTGCCACAACCAGAATCTAGTTTATCTCTTGTATGATTAC TTGCCCAATGGGAATTTGGCTGAGAATATTGGAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGC AAGAGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCCATTCCCCATGGAGACTTGAAGTCCAGCAACATTGTATTCG ATGAAAATATGGAACCCCATTTGGCAGAATTTGGGCTCAAACATGTGTTGAACTTGAGCAAAGGCTTATCTACAACCACA ACTAAGCAGGAAACAGGTATGAAAATCTAGTGTGCATATATATAAGAGCATGATGAATAAGTAATTTGTATTTGTATATT CTATAACTTTAGGTCACCAACTGATTTAGATTTAATTTTGGATGGCAGAATACAATGAAGCAATGAAAGAGCAACTCTGC ATGGATGTCTACAAGTTTGGGGAGATTGTTCTGGAAATTTTAACTGGCGGAAGGTTGACAAGTGCAGCAGCTAGCTTACA CAGCAAATCATGGGAAGTTCTCCTAAGAGAAGTTTGCAATTATAACGAAATGAGTTCTGCCAGTTCATTGCAAGAGATTA AACTGGTTCTTGAGGTTGCTATGCTCTGCACTAGAAGCAGGTCAACCGATCGGCCATCCATAGAAGAAGCTCTGAAGCTT TTATCAGGGTTAAAGCGCATAGAAGATTACAAAACTTCTAAAGAAGGGAAATGAAATTTTCATTTGCATCACACCATTGA AGGCCCTTAGAAAAATATAATATTTGCTTAGCTAACAAGTTTGCACTTCTGTAATTAATTGAGTTTGTAGCTTGTATAAT AGATATTTCCATGGTTTCAGTGTGCCATACAATTATGTCCTAGTCTCTCCAAATCCACTTGGTAAAATACTTGAAATGGT ATTCATTTGATTTTATAATATTAATGATTCACTCAATGCATGTTCCTTCTATCTGAATCTCCCTAGTTCTTACAATTACT TGAAGTGAAACAAAGAATGGATTGGATTGTGATGAAAATCTCACCACACCATTGATGCAAACATATCAGCACAAAACAAA TCTCTACCTATCAAAGTTCAAAACCCATTCACATTTGAAAGGAAGTACAACACAACCTCATATAAATAGGCTCAAAATTC AACATTTGAATTCTATTATCTATCTAAGTTCTTAACAATGTGACCTTAAGAACATCAACAACACCATCAAAACTATCAAA CTTGGAACTCACCACATCAACCTCCACTCCAAGCCTCTCCGCCCCGGCCGCAGTGACAGGCCCATGGGCCGCCACGACTA AGCCGGGAGACCTCCTCCTCAAGTCCTCAAAGCCCAGCCCAAATTCCTGCAAGCTCTTAAGCAGGCCTTCTACCTCAGCG CTACTGGTGAACACCACCGCATCCAATCCACCCTCCTCCTCGCTCCTCCTCACAATACCCTCCGCACACCTCGGCCCGGC CCACCGCGTCTCATACGCCTCCACCCGAACCGGGACCCACCCGCCGGCCCGGAGCTCCCGCAGGAAACCGGGCACCACTG GCGGCTCCTCCACCCCAACGACCGCCGGGACCGGACATAAAACCTCCCTTCCACCGCCGGGACCCAGCGCCTCCGTCAGG CTACTCGGCGTCGCCGTCGGCGGCACCAGGACACTAACTCGGTCGGGACGGGCGCAGATTCTGGAGAGGAAATCGCGGTC GAGGAGCTCGGCGTCTTTACCAAGGGCGGCGACGGTGAAGGTGGGGCCGTCCGGGGAGAGAGGAGGTTGTGGGAGAGGTT CGGTGGCGTGGATGAAGGATTGGATTGCGGTTCGGGAGGTGAAGGCGATGGCGGAGAAGGGATCGAGGAAAGGGGTGAGG TTTGATGGGGTCGGTTGGATGATGAGAGTGGGGCACCAGAGAGGTTTGAAGGCGTTGACAGTGAGGAGATGGGATAGTCT TGCGGCGTAGTTTGGCGGCGTCGTGAATGCTACGGTGGGGTTGTGTGCGGTGGTACCGCCGGTGGACATGGCGGTGGTCA GCGCCATTTTTCACTGCCTTTTTTGCATGCTCAACTGGCGGTTACATTTTGCTGCGTTTTTTTCTTTTAAGAAAAATGGA AAGTTAATTTGTTTTCTTTAATATTTTTATTTCTAATGTTTATTCACCAAATTTTATTTATTTATTTCTAATGTTTAAAG GAAAGTTTTATAGTCTTCCGAAGTATTGAAAAAAGGAAAGGTTTATATTTAACATCTTAATTTATGTTGACACAATCGGC AAAAGGTTTAGGATTCAGCGTTGAGGGTTCGAATCCTCAGCATGTCACTTGCGCCGTTCTCCTCCTTACAACAAAGCAAC CCTCCATGTCTCTTAGAGGGATTGAGATTGAAAGGTAAAATAAAATTTGATTAAACATGTATCGGTGATTGAGATTAAAC TATTGAAACCTAAATTCATTCTTTCCCCCTCCTCCCGACTACGCAACCCTTTATGCCTCTTATAGGGA
CDS sequence (LotjaGi6g1v0207100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATTTTCAAATGCTTCTTCTACTTTAATCTTCTCACTACTTTCATGTTATCAGCAGTTTTAGCCATAGACCCTTA TTCAGAGGCACTCCTGAGTCTCAAATCTGAACTTGTAGATGATGATAATAGTTTGCATGACTGGGTAGTGCCCTCTGGAG GGAACTTAACTGGAAAATCCTATGCATGTTCTTGGTCTGGAATCAAGTGTAACAAAGACTCAACAATTGTAACTTCCATA GACCTGTCCATGAAGAAACTTGGTGGTGAATTATCAGGGAAGCAATTTGCCATCTTCACAAAGCTTGTTGATCTTAACCT GAGCCACAATTTCTTCTCTGGAAAGCTGCCAGCAGAAATTTTTAACCTCACCAGCCTAAAGAGCTTGGATATCAGCAGGA ATAATTTTTCAGGTACCTTCCCTGGAGGAATTCACAGCCTCCAAGATTTGGCTGTGCTTGATGCCTTCAGCAACAGCTTT TCAGGGTCTCTTCCTGCAGAATTTTCACAGCTAGAACAGCTTAAAGTTCTTAATCTTGCTGGGAGTTACTTCAGAGGATC AATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTCCATCTTGCAGGAAATTCTCTCACAGGAAGCATACCTC CGGAACTGGGTAACCTCAAAACAGTGACCCACATGGAGATTGGCTACAACTTATACCAGGGTTTCATTCCACCCCAGCTA GGTAATATGAGCCAGCTTCAGTATCTTGACATGGCAGGTGCAAATCTTTCTGGTCCAATACCAAAGGAGCTCTCCAATCT CACCAGTTTGCAATCACTTTTTCTGTTCAGAAACCAGCTCACTGGATCAATACCAAGTGAGTTAAGCAAAATCAAACCTC TCACAGATTTAGATCTCTCTGATAACTTCCTTTCAGGATCCATTCCTGAAAGCTTCTCAGAGCTGAAGAACCTGAGACTG CTTAGTGTCATGTACAATGACATGAGTGGCTCTGTTCCTGAAGGCATTGCAGAACTCCCATCCTTGGAAACTCTTCTCAT TTGGACCAATCGCTTCTCTGGTTCGCTCCCACGGAGCCTAGGCAGGAATTCCAAGCTCAAATGGGTGGATGTCTCCACAA ACAATTTCATTGGCAGCATACCAGAAGACATTTGTGTGAGTGGAGTACTATCTAAGCTGATCCTGTTTTCAAACAAATTC ACAGGTGGTCTTTCATCAATCTCCAACTGTTCTTCCCTTGTTCGTCTTCGTCTAGAAAATAATTCTTTCTCAGGAGAGAT CCGTTTAAAATTCAGCCATCTTCCTGATATCTCATACATCGATCTGTCCAGAAACAATTTTGTTGGTGGGATTCCCTCAG ATATTTCTCAAGCAACTCAACTGGAGTATCTCAATGTGTCTTATAATCTGCAATTAGGAGGCACCATCCCATCACAAATG TTGTCTTTGCCCCTGCTTCAAAATTTGTCAGCATCTTCTTGTGGTATTAAAGGCGATCTTCCGCCATTTGCGTCCTGCAA ATCAATTTCAGTCATTGATCTTGATAGGAACAACTTATCCGGAATCATCCCAAACAGTGTTTCCAAATGTCAAGCTCTTG AAAAAATCAATTTATCAGACAATGATCTGATAGGTCAAATTCCTGAGGAGCTAGCCAGTATCCCTGTTATTGGTGTAGTA GACTTATCTAACAATAAGTTCAGTGGCAACATACCTGCAAAGTTTGGTAGTTCTTCAAATTTGCAACTCCTCAATGTGTC TTTCAACAATATCTCCGGTTCAATACCCACAGGGAAGTCATTCAAATTAATGAGTAGCAGTGCATTTGAAGGAAATTCAG AGCTATGTGGAGCACCTCTAAAGCCATGTCCTGATTCAGTTGGAATATTGGGCAGCAAGGGCACACGGAAGCTTACACGT ATTCTGCTACTCACTGCGGGGTTGATAATAATCTTTCTAGGAATGGCTTTTGGAGTGCTTTATTTCAGAAAGGCAGTTAA AAGTCAATGGCAGATGGTTTCATTTGTTGGACTACCTCAATTCACAGCAAATGATGTTTTGACAAGCTTGATTGCCACAA AACAAACAGAAGTCCCATCACCATCACCTGCAGTTACAAAGGCAGTTCTTCCTACGGGTATAACAGTTTTAGTCCAGAAG ATTGAATGGGAAAAAAGGAGCATTAAGGTGGTGTCACAATTTATAATGCAACTAGGAAATGCAAGGCACAAGAATTTAAT CAGACTGTTGGGTTTTTGCCACAACCAGAATCTAGTTTATCTCTTGTATGATTACTTGCCCAATGGGAATTTGGCTGAGA ATATTGGAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGAGGACTTTGCTTCCTTCACCAT GAATGTTACCCAGCCATTCCCCATGGAGACTTGAAGTCCAGCAACATTGTATTCGATGAAAATATGGAACCCCATTTGGC AGAATTTGGGCTCAAACATGTGTTGAACTTGAGCAAAGGCTTATCTACAACCACAACTAAGCAGGAAACAGAATACAATG AAGCAATGAAAGAGCAACTCTGCATGGATGTCTACAAGTTTGGGGAGATTGTTCTGGAAATTTTAACTGGCGGAAGGTTG ACAAGTGCAGCAGCTAGCTTACACAGCAAATCATGGGAAGTTCTCCTAAGAGAAGTTTGCAATTATAACGAAATGAGTTC TGCCAGTTCATTGCAAGAGATTAAACTGGTTCTTGAGGTTGCTATGCTCTGCACTAGAAGCAGGTCAACCGATCGGCCAT CCATAGAAGAAGCTCTGAAGCTTTTATCAGGGTTAAAGCGCATAGAAGATTACAAAACTTCTAAAGAAGGGAAATGA
Protein sequence (LotjaGi6g1v0207100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIFKCFFYFNLLTTFMLSAVLAIDPYSEALLSLKSELVDDDNSLHDWVVPSGGNLTGKSYACSWSGIKCNKDSTIVTSI DLSMKKLGGELSGKQFAIFTKLVDLNLSHNFFSGKLPAEIFNLTSLKSLDISRNNFSGTFPGGIHSLQDLAVLDAFSNSF SGSLPAEFSQLEQLKVLNLAGSYFRGSIPSEYGSFRSLEFLHLAGNSLTGSIPPELGNLKTVTHMEIGYNLYQGFIPPQL GNMSQLQYLDMAGANLSGPIPKELSNLTSLQSLFLFRNQLTGSIPSELSKIKPLTDLDLSDNFLSGSIPESFSELKNLRL LSVMYNDMSGSVPEGIAELPSLETLLIWTNRFSGSLPRSLGRNSKLKWVDVSTNNFIGSIPEDICVSGVLSKLILFSNKF TGGLSSISNCSSLVRLRLENNSFSGEIRLKFSHLPDISYIDLSRNNFVGGIPSDISQATQLEYLNVSYNLQLGGTIPSQM LSLPLLQNLSASSCGIKGDLPPFASCKSISVIDLDRNNLSGIIPNSVSKCQALEKINLSDNDLIGQIPEELASIPVIGVV DLSNNKFSGNIPAKFGSSSNLQLLNVSFNNISGSIPTGKSFKLMSSSAFEGNSELCGAPLKPCPDSVGILGSKGTRKLTR ILLLTAGLIIIFLGMAFGVLYFRKAVKSQWQMVSFVGLPQFTANDVLTSLIATKQTEVPSPSPAVTKAVLPTGITVLVQK IEWEKRSIKVVSQFIMQLGNARHKNLIRLLGFCHNQNLVYLLYDYLPNGNLAENIGMKWDWAAKFRTVVGIARGLCFLHH ECYPAIPHGDLKSSNIVFDENMEPHLAEFGLKHVLNLSKGLSTTTTKQETEYNEAMKEQLCMDVYKFGEIVLEILTGGRL TSAAASLHSKSWEVLLREVCNYNEMSSASSLQEIKLVLEVAMLCTRSRSTDRPSIEEALKLLSGLKRIEDYKTSKEGK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 18 | 13 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 640 | 617 | - | – | |
| PANTHER | 25 | 947 | 923 | 9.2E-229 | – | |
| PANTHER | 25 | 947 | 923 | 9.2E-229 | – | |
| Gene3D | 26 | 148 | 123 | 1.2E-26 | ||
| Pfam | 29 | 71 | 43 | 2.7E-6 | ||
| SUPERFAMILY | 79 | 401 | 323 | 2.2E-62 | – | |
| SMART | 99 | 123 | 25 | 70.0 | ||
| Pfam | 125 | 147 | 23 | 1.9 | ||
| Gene3D | 149 | 220 | 72 | 6.5E-19 | ||
| SMART | 195 | 219 | 25 | 37.0 | ||
| Gene3D | 221 | 327 | 107 | 1.5E-30 | ||
| SMART | 267 | 291 | 25 | 46.0 | ||
| Pfam | 294 | 315 | 22 | 0.81 | ||
| Gene3D | 328 | 382 | 55 | 1.3E-12 | ||
| SUPERFAMILY | 333 | 616 | 284 | 1.56E-45 | – | |
| SMART | 339 | 363 | 25 | 100.0 | ||
| Gene3D | 383 | 627 | 245 | 8.1E-64 | ||
| TMHMM | 640 | 662 | 23 | - | – | |
| Phobius | 641 | 662 | 22 | - | – | |
| ProSiteProfiles | 646 | 945 | 300 | 18.634 | ||
| Phobius | 663 | 958 | 296 | - | – | |
| Gene3D | 701 | 763 | 63 | 4.2E-8 | – | |
| SMART | 704 | 942 | 239 | 0.004 | ||
| SUPERFAMILY | 705 | 945 | 241 | 4.85E-34 | ||
| Pfam | 729 | 940 | 212 | 2.5E-16 | ||
| Gene3D | 764 | 957 | 194 | 1.7E-26 | – | |
| ProSitePatterns | 806 | 818 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0207100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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