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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0235200 |
| Transcript ID | LotjaGi6g1v0235200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA ligase; TAIR: AT5G57160.2 DNA ligase IV; Swiss-Prot: sp|Q9LL84|DNLI4_ARATH DNA ligase 4; TrEMBL-Plants: tr|K7MBU8|K7MBU8_SOYBN DNA ligase; Found in the gene: LotjaGi6g1v0235200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:54499461..54514433) extracted from Lotus japonicus Gifu genome v1.2.
TCCATGAGAAGGTAAATGATTTCTTTTGTACTATTTAAGAAGATTCCATAACTCGTGTTAAGGAAGTCGTTGGTTTCATC CTTCACTTTCAGTCAGGGTGTTGAGTTTTGACTCTTGATTCCAGTCACATGATCAGAATCATCTCCCATCCTTGGCGGTT ACTCTTCCAAATTCGAATTCGCGCTCACTGAAACCCGACTTCAACCTCATCGCCGCCGTACCAGAGAGAGCGCACGCTGA AAATGACGACGGAGCAGACGAAGTTCAGCGTGCTCTGCAGCCTATTCACATGGACGCAGAGAACCAAGTCGCCGGCGAAG AAGCGTTCCAAGTTCCGCAAGTTCCTCGACTCCTTCTGCAGAGACGCTAACTACTTCCCCGCCATTCGCCTCATCCTCCC TAACCTCGACCGCGAACGCGGCTCCTACGGCCTCAAAGAGTCCGTCCTCGCCACCTCCCTCATCGACGCTCTCGGTATGG CTAGGGATTCTCAGGATGCTCTCCGCCTCATCAATTGGCGTAAAGGCGGTGCTAAAACTGGTGCTAGTGCCGGCAATTTC GCACTCGTCGCCTCTGAGGTTGGATTCTCTTCTCTGAGCATTTTGTATTGTGTGAGTGCATAGGGTTTTGGTGGCGGTTT TTGTTGTTGTTGTTGAAAATTGAATGTGAGTATTGTTGTTGGTTCTGAGGCAGGTGCTGCAGCTTAGGCAAGGGACTGCT TCTGGTGGTTTGACGATAAAGGAGTTGAATGACTTGCTTGATCAATTGGCTTCGAGCGAAAACAGGTATATGGCTTTCGC TTTGATTGTTTCCGCGCTTCATTATTGTTTCTATTTGTTCTTTCGTTATTGCGGTTGCTTTTGCTGTATGTGTGTGATTG TGTGTATGCCTAAGGTCTGTTGATAGTGCTAGGGGATGGAAGTGTTTACATCATCTGAAGTTGTGATGGATGGGGAAGAA TCTTTTATTATTACTATTATTGTTACTAATATGAAAAATAGGCGAGGAGTAGATAAAGAAAAAATAACTTTGAAGTTAAA TGTTGAATTGAAAGTTTTAGTTCACCCTGCAAAAAATTGATGCTGCAAGAATTTCTCTTTAAGTCATTCTTTATGATTGT TTGTGAGCATTGAGGCGTTCCAAATTAGTCCAATATCAAACAACTAGAAGGAACTGAGTCTCGGGTTTAAGTCTTGTATG GAGAAAAACTTCGTAGAGAGAGCTAGCCTCATCGCGCTGTGGATGTTCCTGGCTCGTACAAGATTGGCTTTCGTGGAGGA TAACTGTTACAAAGTGTTTCTGAGCTCTGCCACGTGCTAGGACTAGGATATCTTTTTACTAGCTATTGGATAAGTTCTTA AACTCATCCCTGGGGGTCTACTATGAGGCAAATTGGACACCGAATTGACTATCATGAAACTCTGGCTTCTGGGTATTGAA GAAGCTAAAGCATAATGTTAAAAACTGAGACAGTTTTTCTTAGAAGCAGCACCAAGTACTGTTTGTTCTGATGTTTCTGA AGAAGATAACAACATCAATAGATAAAACCTTTGTCCCACTTTGCTTACTAGGTGGGGTTTGGACCAAATGACACCATTGT TTTATTCTTTTAAGAGGATCTGTTGTTGTTCTCTTATATGGTTCTCTTGTTTTTCTTAAATGAATTTTCTCTAACTTGAA AGAAGTCATTTAATGAAAATTCAGGATCAGTACACTATACTGGAACAAGACTTATTCTTCCATCTATATAGTTAAGTATG GTCATTGGAAATCTATTTCCAATCACTTGTAAGTTGTTTATGCATCTCTTATCTATGGAAAAGACTGGCAACTAGCTCTA GCTCCAGCTGTCTAGGTTTTCCATCCTCCCACAATGCCTCCTATAAAGAGCTAGGTTCAAATGAGAGCGCTGCAGTCACT TCCCTTCTTAGAGAAGCAAAATAGCAGTATTGAACTCTCTTAATATTCAAATTCCTAATCCAACTTGTTATGAATTATGA TAGTTTGCAGCAAATTTCTTCTCCATTGACAAGACAGAGTTCTTCCTTCCTTTCCATCCAAAGATAAAAATAACAAATAG TAATAACTAAGGAGAAGAATGCTTTTTACTGTAGTTTTTACTTAATTCTTGTATGGCTTGACTATTATTACAGGGCTGAG AAGAATCTGGTTCTTTCTACCCTTATCAGAAAGACAAATGCACAGGAAATGAAGTGGATTATCATGATAATTCTCAAAGG TGTTTCTCATTTACGCCTGTAAATTGATTTAATACATTTAATGAGCTTTGAGCATGTAACTAAATTTTGTTGCAGATCTA AAGCTGGGAATTAGTGAAAAAAGCATTTTCCATGAATTCCATCCAGATGCCGAAGACTTGTTTAATGTTACATGTGACTT AAAATTAGTTTGTGAAAAGCTAAAGGATCGGAACCAGCGCCATAAACGGCAGGTTAGTTGTGATTTAGAAATTAGTTTTG GAACTCTACAGCTTACAAGTTACAACGATGGCAATTACAACCTTTAATTTTTTAACTCGGGCTCTAAACAAGCCAAGATT GAGCTGAACACTTGCATTGTAATGCTAAACTCAGAAATGAATAGCCAAAACGGTGTGTTCTCCTCCTGATTTATAATTCT CATAATACAAGCTGATATTCAGCCTTGTAAATCAGCTGAACTGTATGTATACGTATATGAGAACAGAATAACATTCTCTT GTAAGACCTTTGAATGGCCACAAGTCTAACTCTAAGTTGGCTGATAGACCTAACTCCTAAGTATTTGTGTAGGACAATGG ACCTAAACCTTTAAATTGACCACCAAATATATATTTTAAAAAATTAGAACAAAAATTCAATACATCAATAAGTCCTTATA AAGGGTAGAGCAATCCTCACCCATGAGCTAGCTTTTGGGGTAGAGTCTACCTAGATCCGTTTATTGGATGTGTGTAGTGC AATCCTCACCCTTGAGCTAGCTTTTGGAGTAGAGTTAGGTCTAGCCTGATTTCTAATAGTCTGAAAGACTTTTTAAATAA CATAAAGCCCAACATTTTTTGTTACATAGGCTTTCACTAAACTGTTATTCTAGCTTATTTACTGAATAGTCCCATGTCTG GTCAAGCTAGATCTAATGCAAACTCGGCCATAAGCCGCCTTACCTTTTCCCACCCTTGAATCTTGAGCATTGTTAGGGAA AATAAAAGATAGTAACATAAATGGAAAGTTTTGTAACTGCTCATTACTACTTATAGTCTTATATATGCATGGCTTCTTTT CTTTTACAGGATATTGAAGTTGGAAAAGCTGTGCGCCCTCAATTAGCTAAGAGAGTTGCTAATGCAGCTGAAGCATGGAA AAAGGTTTGCTGCACTTAGCCATTTAATCAATCATTTATGCCTCAACCAAATCACTTGTCATACTTGTGTCTTTTCTTTT GGCTACATAATATGGAGATGGGGGACGTTGGCCACATTTAGGCTTGGTAAACCTGAAGTTGTATGCTACTTGACCCTCAG GTTGATGACTTGTTCCCTTATTTGATTAGTATAGGAGTCTAGTATTTAGCCTAGTTTTGCTGTAAATAGGGGTCTGTGCT TCATCTTCTGGTTCACATCATTATACCCCAATGTCATTGTTAAAGAATATCATTGGAAGTCTCCTTTCTTTCTTTACTTC CTTCCCTACCTAAAACCCATAATTTCAACATCAATGACCATCTATTCCATCTTATATTGTGGCAACAAGATTATATTCTC TTTTATTCAAAGTGATTTTCAACACAATGAAGCTGAGGGCTGTAGCAACTTTATTTTGAACTATTCAATAGAAAGTGCAT GATTTCATGCATAGTGAATCCATTAGTTTGACCTTTATTACTCACTTGTTTTTTTGTATGTTTCCTCTTTTATTTAGCTT CATGGGAAGGAAGTTGTTGTTGAGTGCAAATTTGATGGTGATCGCATTCAAATTCATAAAAATGGAACAGAGATACATTT CTTCTCAAGGTAAGTGCAAATGTGTATTTTGTATCTGAATGTTTTTTTTTTTAACTTCAACTTGTGCCCCCCACCCTCCA GACTTTCTGTGCATTGGTGTGTGTTATTTCTGATTTTGAAACCTTAGAATGCTCAGTGAATTGTTTTATATTTATATGGC AACTTATACATCAAAGTAGCTAGCTGAGGGAACATGTTGTGGCTATTGTTCTTTGATTTTCTGGATTCTCAACAAGGCGG AGATTTCTAAAAATGTTATGCACTATATTTTTTTACATATTCTTGCCACGGATAGGTCTTGTTGTTTACATTTTCACCCA CTATTGCAGGAACTTTCTTGATCATTCTGAATATGCACATGCAATGTCAGCAATCATAATACAAAACATTCTTGTAGACA GGTGAGCATTTATATTGTGTTTCATACATTGCAATTTTGTTTGTTTTGAACAATTTCTATCCATTCTTTTATTCTTGCTA GTGGGAAGGTGCATGCAACTATAATTTTGGAGGAGGGGGGATGTCTGACATTAAATATATAATATATAGGCAAAGGGGTT GATGTGGGTTTGGTTCTGTTTTCAAAATTAAAATATCAAGAAATCTGATACTAAAATGACTAGAAATTTCAACAATACTG CTGGTTGGGTTTCCTTTCTTCCAATTTCAGTATCTGTTTTATTATGTTTACTTTTGGGCACAATATTGCTTAGCATTGAT CTTTGTTATTTTCCCTTCTTCATCATTAACAAAATTTCCGCATTGATATAAAAAATGCAGACAAACTCTACTGTTATAAA AACAGGATTCCTTCACTCTTGCCTTTTTTTATATAATTCCTTGAATATGCGAATACTATTCCAATACATGAAGTGCATCC TTGAATAATACAGTGATACTTATATTATTTATTTATTTATTTATTTTTCCATATGATCTTATTTAGGTGTATCCTTGATG GTGAAATGTTGGTCTGGGACACATCCTTGAATCGTTTTGCTGAGTTTGGCTCAAATCAGGAAATAGGCATGTGTACTTTA ATAAGGCTTAGTCACTGTAAAGCTTTAATTTTCAGTAGCGTTTGCCTTTTAATATTCTTTGTTCTTGGCAGCCAAGGCAG CAAGGGATGGACTTGATAGTCATAGAAAGGTTCTTTACTTTCAATCTTCTTTATTTTTATTTTTGTATTAGAAAATATCA AGTTTAATTTGAACTTTTTCTTTGTCCTTTCTTGATGCAGTTATGCTGTATCCTTCTCTCTGGACAACTCAAGTATTAAT TCCAACTATTAGGAAATGCGATATGATTTTGGTTTCAATGGTAAAATGAGCATCTAATTCTGTATGTTATGATAAATTTC TAATGCAAGAAACATTTATATCTAATATTCCTTGACTTGAGAATGGTTAGATGTTGCATTTGATATTCTTTATTTTGGAG ATACTAGTGTGATTCACCAAACTTTAAAGGAACGGCATGAGATTCTTCGTAGAGTCGTGAGGCCAATGAAGGGCCAATTG GAAATTTTAGTACCTAATGGTGGTATCAACAGTCACCGTTCTTCTGGTAAGATTCTCCTGGGATGTGTCTTATTGTATGT ACTTTAAGAAAAAAAACATGTACTTTAAGAAAAAAAACTTTTTTCTTCTTGCATGTTGCAATTATTCAGCTGATCCATAA ATTGGATTTGTTTGCTTACTACTTGATTAAGTATTCTTCTTGTTTTGATATCATATTATTATATTATTGTTTTTGTTGTT GCTATCTAGTCTGGTTGGTGCCTCTTCAGATCTGGGAATAGGAGGGCTAACCGCATTTGTTACTTACCTTACTGATTATA ATGTCCATGTGGATTCAATTATCTCATATCCTTCACTCCAGCTTTAATGCCACATCGCTTGAATTGAATTATTTTGTGGA CCATATAAATGAAGTCTTGAGACATGTTTCAAAGAGGGGAGAGTATTAGGAACCCAGAGAAGAAAAAATGAAAGATTGAT TGAAAGAATAAAAAGAAAAGACTATTTTACCGAGATTGAATACAAGCTGGAGGATAGAATTATCAACCAGCTAACTGTTA CACTAACAGTTAACTGATACTTACTCTTTTTCTTTAACTAACTAACTGATCATTCTGCTATCTAACCATAACAACTATTG GCTAGTTAGTTACACAAACTACCTCTTCTTAAGAGGTCTAATTCCTATCACAGTGCCAAACGTAAATCTGTCCCTGCTTG TAAGGCATACTGTTGGCGCTTTATGCTTTGGATGAGCCTTGGCTCTGTATTAAATAAATAAATTCAGCATTTTAGTCGTA GAGTTTTATCATTAATGATACTACATTTTATGACCACCTCTCATATCTTGCCATATTATTGCAATGTCAGTCCAAATTAT TATATATATTGTTTTGGATGTGCAGCTTCTTGTCTCAAGTGTGCATCAAGAGTTTGACTAGAAATATGCATATCTTGGAT ACTCTTTTTACTATCTGTATCCACATTTGTTAATTTTCACATTATTTTCTCTTCATTGATGCAATAAGTTAGTGGATTCT TGAATAACATTTTTGCAACGTGTTTATTGATTAAACGACCTCTTAACCATGTTTTTATGCAGGTGAACCATGTTGGTCAT TTATTGCTCATAATGTGGATGAAGTTGAGAGATTTTTCAAAGAAACCATTGAAAATAGGTCAGCAAATACCCTAATTCAT TTTGCCACCCAAGTTATGTATGGATATTTAAAGCCCTCAAGGATTTGGACTATGCCTAACTCTACCGAAAAAACTAGATT AGTGGTGAGGATTGTGCTACCATTCATAAGGATTTATTTGGTTGCATCTTAGTTAATGTGAGACTTCAACACTCCCCCTC ACACCCAGAACTGGACATCTAGAGTGTGAAGTTTGCAGGACTAAACATTTGAAGGTGCCCAAGATATAGGATAGGCTCTG ATACTATCCTAAGAATTTGGACTAGGCCTAAATTTACCCCAAAATTTAGCTTAGGGGTGATGATTTTCCTACCATTTTAA AGATTTATTCGGCCATATCTCACGTCAATGTGGAACCTTAACTAGATTTATGTATTCATTAGTCTTTTGGGGCATCCCAA ACATCATGAGATTTAGTATTTAACTAGTTTTCCTATTATGCCTTGGGTCCTCTTATAAATTACCTGTTTTTCTAAATTCT AAGAGATTCTAATACATGACGATTAATTACTAAAAGTACAGAAAAGAAGGCATTGCACATGGTTCTTAAGAATTTTCATT TTTCTCCTTTATTTAGAGATGAGGGAATTGTTGTAAAAGACCTCAGCTCCAAATGGGAACCTAGTGATCGCAGTGGAAAG TGGCTGAAATTGAAGCCTGAATACATTCAAGCTGGTTCTGATCTAGATGTACTCATCATAGGTATATATGGTTTTGGTTC TTGTATTTATATACATCCTGAAGCAGCTTGTTTAACATTGTTATTTTGACTATGCTGTTTTTGACAATTTGTAGGTGGCT ACTATGGCTCTGGACGACGTGGAGGAGAGGTTTGGTCATTTCTCCTCAGCATTTGAATTTTTTAAAAAATTATTCGTTGG ATCTTAGAATGAACTTCTAAGGGCTTGCTTTACATTTCAGGTTGCTCAATTCTTGGTTGGCCTTGCAGAGCGTCCATCTC CAAATACACATCCCAAGCGGTATAAATGTTTTAGCGCTTACATTACACGTGCTTTTGGTCCTATTTGAACAATGCACTAG CTTGTTTTATATTATATTTCATTAATGGATTTATATTATATTTAAAAGATGCTTCTTCACCCAATAACCCTTTTGGGCTT GAAGTATGAACAATGCGCTAGCCTGTTTTTATTTATGTGCATAGCTATCTATGCATCGTTCAATTAATCAGGTACTTCTT TGTGTTGCAGATTTATCTCCTTTTGCCGGGTTGGTACTGGACTTTCTGATGATGAGCTTGATGCTGTAATATCAAAACTA AAACCTTACTTCAGGTAGGTTATATGCGTGTGTGTGAAAACATTCCATGCGGATGCGGTGACATTTAGTATTAGTACTTT TAACAAATATTTTCAACAATTGGTTTGATTTCTGCGTCCTCTCTCTTACAGGAAGTATGAATATCCAAAGAAGAGGCCAC CGAGTTTTTATCAAGTTACTAATCATTCAAAAGAAAGACCTGATGTGTGGGTTGATAGCCCTGAGAAGTAATTATTTCAC CTTTTGTCTGAACGCTGAAGTACATGTGACTTTCATTTTCAATGTTATTCAATATTTACGGTTCTCTTCATGCAGATCAA TTGTTCTGTCTATAACAAGTGATATCCGAACTATACAATCTGAGGTGTGTCCTTGAAAATACAGTGTCTATCTGATGGTG AAAAAATTGTTGTCTACATAATCTTTCTTTTCTCATGAACTGCACAGTTTTAACCCAAATTACTTTATTGCAGGTATTTT CTGCACCTTACAGCCTGAGATTTCCTCGAATTGACAGGGTGAGATACGACAAGGCCTGGCATGAATGCCTTGATGTGCAA TGTAAGGGATTTGCCAAATAAGATTTACATGTTCGTTGATGGTGTTGTTGTAAGATTGATTCCTTTCTTTTCCCCCAATT TCAGCATTTATAGAACTTGTGCATTCCAGCAATGGTACCACACAGAGGGATACAGAGCATGGCAGCAAGCAGGACAGTAA ATCAAATCGCATCAAATCCTCCAGACGGGGAGAAAAGAAAAACATGTCTATTGTTCCTTCCCATTTAATACAAACTGATG TTTCCAGTGTTAAAGGGGGGTCCTTAATATTTTCAAATATGATGTTTTGTATCCTGGAGAATCTTGCTATCTACTAATCA TCTGTCCAACTAACTGACTGCCAATTTTTGTTTTCTATCTATATATTGCTTTATACATATGTCTTCATACTTATTTCCTT GTGTTTAAAATAATGTATTAAGCAAGTGTTCAGAGTGCTTTCGTGTTTTAGTTCTTTGTACTGTACTAATCATCCAACTG CTGGAAATCTTCCACCTTTTATGTCAATCTTTAAAATAATGGATATAGTTTCCCTTGACATGCATAGACTTTGTAAATGT GCCTCCATGTCATTCTCTCGAGTCCTTGCACAAAATAATTGCTGAGAATGGGGGAACTTTCTCAATGAATTTGAATAACT CAGTCACCCATTGTGTTGCAGCAGACAGCAAAGGTTCTTTCTCACTCTCTATCTCTATCTCTATCACTTTCTGTGTTCGC GTGTGCTTGAAAATGACAGATTTATTAGCATTTAGCTGAATATCTAATAAAAGCATATTCCTTTAGGGTTTAAATTTGAA GCAGCAAAACGCCATGGTGATATCATTCATTATACTTGGGTATTTGATTGCTATGCACAAAAGAAGCTTGTCCCATTACA ACCAAAGTGAGTATCATACCTGAATATGAAATTTTTACATCCGTTAAAGCTCTTCTGATTGTATATTGCTTTCAATGTTT CCTTCAAAAGGTACTTCCTGTTCCTATCTGAACTGACAAAGAAGAAGTTACAAGAAGAAATCGATGAGTTCTCGGACTTT TACTATTTGGATCTTGATATTGGAGATATCAAACAGGTAATAGCATTAACACACTTTTTCCCCTTTTTAAGGAACTGAGT TATATCTTCCTTTCCTTTTGTGCACCATAGACTTTTTGTCTTAAGGTGGGTTGCTTACATCATAATTAGTAACTCCACGA TTGATTTGCCGTGTTCTTTTCCCTTGGTATTTAACAAAGTCAATCTAGTTCATGCCTCAATAAATTAACCCTCCTTCATC TTTTTCAGCTTTTAAGCAATATTCATAGGTCGGAAGATGTCAGCACTGTTGATCATTATAGGAAAAAATACTGCCCAAAG GATAAGTGGTCTTTCTTTTGCGGATGCTCCGTTTATTTCCACACTGTAATACCATCATTGTAAGATACAGTGACATGCAA TCAAATATTTTTTTTTAACTTAAGCATATATTATGGGATTTAGGATTTTAATCATGATTATTATTTTCTCCAAGTTTGCT CTGTAGCTATCTGCTTATTCAACATTTTCATGTAGGAAAGAAGATTGGCAATTTCTATTGGGACTTTCTTTGAGGAGATT CAAGCTCGAAGTTCTCATGGGTGGTGGAAAAGTTGCTGATAATATTAATTGTGCTACTCATCTAGTGACTTTGTTTGTGC CAAGATGTCATACTAACTTTTGGGAAGAAATTCAGAGTAGGTAAGTTCTGCATTTGCTGGCAACTTGTCATGTTGAATGT TAATTACAGGATAGCTATAGTTAATTTTAGATTTGCAAATTTTTGTGCAAGTTGTCTTATATATGATTTAAAAAACTGAC CAACCAGTTTGACCAGAAAACTAATTGATTAGCTCAGTTGCTGGTCTAGGACAGCTGTTAGAACACCAAAGATAAACTCA ATAATTACATTTCTGACACAGAAATCACACACTATACAGCAATACACTCTGTCCCCGAGACTAAGATCTCCTACGGAGAG TACTCTCTGTCCATTATACATAATATCAACATCCCATATCCTATAGACAACCCTACTATAACATATACTCCTAATAAATT ACTGCCGGTTGTCATTAATCAGTGCTGCCACTAATTATTTCCTAATCAGTGCTGCCACTATTTATTTCCTAAGGCTTAAA AACACATTTGGTCCCCCACGAATGCGTTTTGTGCAAAATGAGTCCCTAAACTATTTTTTTAGCATTCTCAGTCCCCCACG TTATGCTCTGTTACCACAGTTAGTCCTTCTGTTAGATTTTAAACGGTTTTTTCATATGTGGAATTTTTTAAATGACTTGG AGGGTTATAAGGAAAGAGAGGGAGATTATTAAGAGAGAGAATAATCATGTTCATCTTCATCACATACAAGGACCCTAATT TTTCCAGATTTTCTTCACCACCATCTTTTTCATCTCTTGGTCTTCATCATCTTCGGTAAAATTTCAGAATAATTTAGAAG CTCAAGACCATCTAACTTCTCAATATTGAAATCCTAGATCTCAAAATTAAAAACCCCTAAGAAATTCAAATCCATCAACC AGGAGAAAGAAACAACCAGGAGGGAAAAAGAAACAAGGTACAAGAAACAAGAAACGGGAAAAAAACAGGACAAAAGTAGA GCATCCACAGGCTACCACGCACAAAAGGAGCAGCCCAGCCCCTCCCACTCTCACACAACCACCTCACGCATCCACAACTG GGAAAATCTTCAAATATTCTTCATCTTCAAACCCAGAAGAACTCCTTCAACTCAGACATCCCAACCATCCAAACCCAGAA ACCCAACCCAGAAACTCCTTCAACCATAAAAATCCAGAAAAGAAACCTAGAAAATAACTCAATTCTGGATGCATCCATCC TTTCAATCGAACCCATGGCAGATCTATGAACCCGAGGTCGGGATCTTGTGCATCCGTCCTCTCAATCTCTTCCTCTTCTC TCCGATCTGATGGGTGGTGGTGGTGGTTAAGCGTGAGATTTAGATAAAGTGCAGATCGACTCGATTTAGGGTGCGAGAAG GGAGGAGTGGTGGCGGAGCGCCTGTGGCCATGGAAGAAGATGAAGAAGATGAAGATGTGAGGTGATCTGGTGCCATTTGA TGTGCCTGCTAAGGAGGTGAAAATAAATCACGTGATCCTCACATGCTTTCGTTCTTGGCCCCATCTCACTCCTACTAAGT GTCCATGTCATTAAAAATTGACACTTAGGAGAGATCCGTTTGATTTCTGACGGAAAAAGGCTGAAGGTCTAACAGTAGTA ACAGAGGAAAACGTGGGGGACTGAGAATGCTAAAAAGATAGTTTAGGGACTTATTTTGCACAAAACGCATTTGTGGGGGA CCAAATGTGCTTTTAAGCCATTTCCTAATTATAGTGCCCAAGGAGATCACAAATTTTACATAAGAGGAAAATATGGTAAC TGTTGAGATCTCCCATATTGACTAAAGATATGGTCAAATAAGTGTTTATAAAGGATAGAGCAACCTTCACCTCTAAGCTA GCTTTTGGGTAGAGCTAAGCCTAACCCAAATTCTAAGATGGTATCATAGTCTATCCTAGATCCGTTTATTGGAGACTAGC CATATATGGGGCCACCAACAGATGTTCATTCTTGCAAATTCCACGCTCCAGATGTCCAACCCTGGGCGTGAGGAGGTGTG TTGAGAAGTCTCACATTGACCGAGATACGACCAAATAAGTGTTAATAAAGGTCTAAGCTATCTTTTGGGTAGAGCTAGGC CTAATCCAAATTCTAAGAGTAACCATTTCAAACGGTTCATGTCTTTTGGTTTCATTGTTTTCATCTTACCAAATGCTATT GGGTACTTAGTATAGTAGCAAGGATGCCTACAGGTGACTGCCAAGAAGACAAAAATGTCTTAATTACTTACCTACCTGTG TTTTATCATCTTGGCTTGTTGTAAGTATTACCAAAATAAAAAGGCTAAAATTAACAATATTGCACAAATTTGTCACTATC TACGCACAATGCTGTTCATACATGGCTTGTCTTGTTGGTAATCATGGTGGGAGTTTTCCCCCTTCCTCAAATGTTATATT CTGTACATTATACCACGAATTGTGTCACAAGGTTCATTCCCAACAGAGTGAAATTCTGTTAAGAATTTTTTCTCTTATTA GAAAAATTCATGGATGATAAATACTACCCCTCTTTCTCCTCATCGGGCTTTGTTTCTTGGGGCAGTTTCACTTCAGTAGA GAGAAGAATTCTTCGAAGCAAGAGGTTGCATATAGTTAAATCGCAGTGGTTAGAGGATTGTTTGAACAGTAGCCAAAGAT TACCAGAAGATGCCTATAGCTTGAGACCCGATGGAATAGAAGAATCAACTACTGAAGATTGGTAAGTTTATGCATGTGCA GCATTTACAGTCTCTGACTTATGTGGATGGCAAGTATGAAATTTGTGTGAATGTAATTGCTTTAATACTTTTACTCATTA TATGTTCCTCACAAGTTCTGTCACCTGTAGTTGTGGTATTTTTCCGTCTTTTTTTTTCTTTGGGTGGTACTGCATAACAT CTGTCTTTGACAGTAGATTGTCTTTTGGGGTTGGAAAATTTTAATAAATTCATGTTATGCTTAGGCTTTCTTAGTAGATT TGATACAAATTACTGAAATGGGGGATGGATACTAGTTGCTAGGTTAATTATGTCATTTATAAAGAAGTGGAATAGAAAGA CCGATAGCAAATATGAGATAAAGCTTTGCATATTAGTAGAAGACGTTATTGTGAACCATGGTCTAGTATATTGCAAACAT TTTTTTTAACTTTCTAGTGTACTTGTGCTGAAAATAATGGTCCACCATGCAGCAATTGCAAGTCTAGTGTCTTTAACTAT AGTCAAATGTAGTTCTCTCTAAGAACTGTGCACTTGTATGGTTCCTATATTTTTCTTAGCATTTGATTGTTTTTTGCTAT CTGTTGTAGTGAATATGACTTGGCGTTAGACACCCATCTGGTTGGAGATAATGTAGAGGACCAAAATACATCTTTCTCTG ACCTTGAAAGTAAACATAGAACTGCAAAAGCTGCTAATGAACCAAGTTTGGCTTCGGTGTCCCAGGAGAAGGGTGGCGGA AGGAAAAGAGGAAGACCTGCAGGCAGAGGTACCAAAAACGTAAAAACAGCCGGTAACCAAGCTCCCAGAGGCAGAGCACG AGCACAAGTTGCGAGAAAGCGGCCTAAAATATGTGAATATGAATCAGATGATGACAGGGATTCTCAACAAATAAGACCAC AAGGGCAAGACACAAGAGAAGGAGGTCTTAATTTTAATGAGAAGCATTTAGAACCCCATGAGACCAAGAAACCTGAAAAT GTTCAAGATACTGAAACCGTTGAAAGTTCTCAGCAAAACGAGGCATTCAAGCCAGAGGATTCGAAGGAAAGAGAATTTGA AAGAATATTTGTTCCTGAAATCGAAATGACTGATAGGCACAATGGCCATAACAGTCAGGTGAGTGAGAAACTTGAAATTT TGGCAGATCCCGTGCAGGCCATGTTATTTGACATGATTCCTAGCCTTGCCCCCAAGAATGTTGAGCAACCTACGGCGAGT CATCGAGAAGAGAAGCTTCCTTCCAATGCAGATTCAACTACTGCTACTACTACTAAGAAAAAGAAGGTTAGCTACAAGGC TATTGCTGCCGAGCTGCTCAAGGACTGGTAGAACATCAATTTACATCAATGTATTACTAATTTCTGAATGTGTGCCAAAA GTTCCTTTGTTAGATCAAATTGATTGTTACCCAAGTGTTTCTGTTTTGGTCCGTTATTGTTATTCAAATGTTAAATCAGG TTTTCTTTGATCATGGACTTGTATGATTAGTGTGGTATATCTTAGAAAATCATATGTAAGTTTTGTATTTTTACCCTTAA ATTATAGAAATTTACTCTCCTCGGTCCCCTCTTTATTTGTTCTTTTTTACCATGTCTCTGCTTTTTTCTGTTCATGCTGG ATATGTTTAGATGAAAAATGAAGGGCTAAAGCCCTTAGCTTTTTCTCCATGCCTGAGACTTGGGTGGAGCATGTTGATAA ACTTCTGCCAGAAAAATTTACTCTATAAAATGATTTTAGGATTTATAAATTATGGTCGGGTTGCCAAGTTGTTGCAAGGT TTTGATTCCTCCATTTTTAAATTCAGCTATTTCATTTTTAAATTAAGCACCATCAGAATAATGAAATAGCTTTGCCAAGT TGTTGCAAGGTTTTGATTCCTCCATTATGGTGATCAATGATGCTTGAGTTGTTGCAAGCTTGTATTAAACACCAAATTAT GCCTTAAAAAAACCATTCACATGGATGCAGCTCAGTTTACTATATAGTATATGGGAACGGAGGGAGTAATTTGGGGTCAC TACTCCTTCGACG
CDS sequence (LotjaGi6g1v0235200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGCCAATTGGAAATTTTAGTACCTAATGGTGGTATCAACAGTCACCGTTCTTCTGGTGAACCATGTTGGTCATT TATTGCTCATAATGTGGATGAAGTTGAGAGATTTTTCAAAGAAACCATTGAAAATAGAGATGAGGGAATTGTTGTAAAAG ACCTCAGCTCCAAATGGGAACCTAGTGATCGCAGTGGAAAGTGGCTGAAATTGAAGCCTGAATACATTCAAGCTGGTTCT GATCTAGATGTACTCATCATAGGTGGCTACTATGGCTCTGGACGACGTGGAGGAGAGGTTGCTCAATTCTTGGTTGGCCT TGCAGAGCGTCCATCTCCAAATACACATCCCAAGCGATTTATCTCCTTTTGCCGGGTTGGTACTGGACTTTCTGATGATG AGCTTGATGCTGTAATATCAAAACTAAAACCTTACTTCAGGAAGTATGAATATCCAAAGAAGAGGCCACCGAGTTTTTAT CAAGTTACTAATCATTCAAAAGAAAGACCTGATGTGTGGGTTGATAGCCCTGAGAAATCAATTGTTCTGTCTATAACAAG TGATATCCGAACTATACAATCTGAGGTATTTTCTGCACCTTACAGCCTGAGATTTCCTCGAATTGACAGGGTGAGATACG ACAAGGCCTGGCATGAATGCCTTGATGTGCAATCATTTATAGAACTTGTGCATTCCAGCAATGGTACCACACAGAGGGAT ACAGAGCATGGCAGCAAGCAGGACAGTAAATCAAATCGCATCAAATCCTCCAGACGGGGAGAAAAGAAAAACATGTCTAT TGTTCCTTCCCATTTAATACAAACTGATGTTTCCAGTGTTAAAGGGGGGTCCTTAATATTTTCAAATATGATGTTTTACT TTGTAAATGTGCCTCCATGTCATTCTCTCGAGTCCTTGCACAAAATAATTGCTGAGAATGGGGGAACTTTCTCAATGAAT TTGAATAACTCAGTCACCCATTGTGTTGCAGCAGACAGCAAAGGGTTTAAATTTGAAGCAGCAAAACGCCATGGTGATAT CATTCATTATACTTGGGTATTTGATTGCTATGCACAAAAGAAGCTTGTCCCATTACAACCAAAGTACTTCCTGTTCCTAT CTGAACTGACAAAGAAGAAGTTACAAGAAGAAATCGATGAGTTCTCGGACTTTTACTATTTGGATCTTGATATTGGAGAT ATCAAACAGCTTTTAAGCAATATTCATAGGTCGGAAGATGTCAGCACTGTTGATCATTATAGGAAAAAATACTGCCCAAA GGATAAGTGGTCTTTCTTTTGCGGATGCTCCGTTTATTTCCACACTGTAATACCATCATTGAAAGAAGATTGGCAATTTC TATTGGGACTTTCTTTGAGGAGATTCAAGCTCGAAGTTCTCATGGGTGGTGGAAAAGTTGCTGATAATATTAATTGTGCT ACTCATCTAGTGACTTTGTTTGTGCCAAGATGTCATACTAACTTTTGGGAAGAAATTCAGAGTAGTTTCACTTCAGTAGA GAGAAGAATTCTTCGAAGCAAGAGGTTGCATATAGTTAAATCGCAGTGGTTAGAGGATTGTTTGAACAGTAGCCAAAGAT TACCAGAAGATGCCTATAGCTTGAGACCCGATGGAATAGAAGAATCAACTACTGAAGATTGTGAATATGACTTGGCGTTA GACACCCATCTGGTTGGAGATAATGTAGAGGACCAAAATACATCTTTCTCTGACCTTGAAAGTAAACATAGAACTGCAAA AGCTGCTAATGAACCAAGTTTGGCTTCGGTGTCCCAGGAGAAGGGTGGCGGAAGGAAAAGAGGAAGACCTGCAGGCAGAG GTACCAAAAACGTAAAAACAGCCGGTAACCAAGCTCCCAGAGGCAGAGCACGAGCACAAGTTGCGAGAAAGCGGCCTAAA ATATGTGAATATGAATCAGATGATGACAGGGATTCTCAACAAATAAGACCACAAGGGCAAGACACAAGAGAAGGAGGTCT TAATTTTAATGAGAAGCATTTAGAACCCCATGAGACCAAGAAACCTGAAAATGTTCAAGATACTGAAACCGTTGAAAGTT CTCAGCAAAACGAGGCATTCAAGCCAGAGGATTCGAAGGAAAGAGAATTTGAAAGAATATTTGTTCCTGAAATCGAAATG ACTGATAGGCACAATGGCCATAACAGTCAGGTGAGTGAGAAACTTGAAATTTTGGCAGATCCCGTGCAGGCCATGTTATT TGACATGATTCCTAGCCTTGCCCCCAAGAATGTTGAGCAACCTACGGCGAGTCATCGAGAAGAGAAGCTTCCTTCCAATG CAGATTCAACTACTGCTACTACTACTAAGAAAAAGAAGGTTAGCTACAAGGCTATTGCTGCCGAGCTGCTCAAGGACTGG TAG
Protein sequence (LotjaGi6g1v0235200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGQLEILVPNGGINSHRSSGEPCWSFIAHNVDEVERFFKETIENRDEGIVVKDLSSKWEPSDRSGKWLKLKPEYIQAGS DLDVLIIGGYYGSGRRGGEVAQFLVGLAERPSPNTHPKRFISFCRVGTGLSDDELDAVISKLKPYFRKYEYPKKRPPSFY QVTNHSKERPDVWVDSPEKSIVLSITSDIRTIQSEVFSAPYSLRFPRIDRVRYDKAWHECLDVQSFIELVHSSNGTTQRD TEHGSKQDSKSNRIKSSRRGEKKNMSIVPSHLIQTDVSSVKGGSLIFSNMMFYFVNVPPCHSLESLHKIIAENGGTFSMN LNNSVTHCVAADSKGFKFEAAKRHGDIIHYTWVFDCYAQKKLVPLQPKYFLFLSELTKKKLQEEIDEFSDFYYLDLDIGD IKQLLSNIHRSEDVSTVDHYRKKYCPKDKWSFFCGCSVYFHTVIPSLKEDWQFLLGLSLRRFKLEVLMGGGKVADNINCA THLVTLFVPRCHTNFWEEIQSSFTSVERRILRSKRLHIVKSQWLEDCLNSSQRLPEDAYSLRPDGIEESTTEDCEYDLAL DTHLVGDNVEDQNTSFSDLESKHRTAKAANEPSLASVSQEKGGGRKRGRPAGRGTKNVKTAGNQAPRGRARAQVARKRPK ICEYESDDDRDSQQIRPQGQDTREGGLNFNEKHLEPHETKKPENVQDTETVESSQQNEAFKPEDSKEREFERIFVPEIEM TDRHNGHNSQVSEKLEILADPVQAMLFDMIPSLAPKNVEQPTASHREEKLPSNADSTTATTTKKKKVSYKAIAAELLKDW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 799 | 798 | 5.3E-224 | – | |
| PANTHER | 2 | 799 | 798 | 5.3E-224 | ||
| Gene3D | 14 | 74 | 61 | 6.0E-14 | – | |
| SUPERFAMILY | 26 | 72 | 47 | 1.15E-8 | – | |
| Pfam | 28 | 72 | 45 | 9.7E-10 | ||
| ProSiteProfiles | 29 | 109 | 81 | 19.781 | ||
| ProSitePatterns | 48 | 72 | 25 | - | ||
| Gene3D | 75 | 236 | 162 | 7.9E-42 | – | |
| CDD | 79 | 223 | 145 | 4.55837E-44 | – | |
| SUPERFAMILY | 80 | 231 | 152 | 1.46E-26 | ||
| Pfam | 96 | 215 | 120 | 3.8E-14 | ||
| MobiDBLite | 234 | 265 | 32 | - | – | |
| MobiDBLite | 241 | 265 | 25 | - | – | |
| ProSiteProfiles | 282 | 370 | 89 | 17.179 | ||
| SMART | 284 | 360 | 77 | 1.1E-9 | ||
| Pfam | 284 | 367 | 84 | 4.3E-16 | ||
| CDD | 286 | 372 | 87 | 1.10305E-25 | – | |
| SUPERFAMILY | 286 | 371 | 86 | 2.18E-20 | ||
| Gene3D | 298 | 411 | 114 | 1.8E-27 | ||
| SUPERFAMILY | 422 | 543 | 122 | 2.91E-11 | ||
| Gene3D | 429 | 541 | 113 | 2.6E-14 | ||
| CDD | 433 | 529 | 97 | 1.29899E-7 | – | |
| SMART | 445 | 531 | 87 | 9.7 | ||
| ProSiteProfiles | 470 | 541 | 72 | 12.004 | ||
| MobiDBLite | 573 | 709 | 137 | - | – | |
| MobiDBLite | 636 | 657 | 22 | - | – | |
| MobiDBLite | 666 | 687 | 22 | - | – | |
| MobiDBLite | 757 | 785 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA ligase activity | Catalysis of the formation of a phosphodiester bond between the 3'-hydroxyl group at the end of one DNA chain and the 5'-phosphate group at the end of another. This reaction requires an energy source such as ATP or NAD+. | ||
| Molecular function | DNA ligase (ATP) activity | Catalysis of the reaction: ATP + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + diphosphate + deoxyribonucleotide(n+m). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA repair | The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway. | ||
| Biological process | DNA recombination | Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Interchromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | ||
| Biological process | DNA ligation involved in DNA repair | The re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase, that contributes to DNA repair. |
Expression pattern of LotjaGi6g1v0235200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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