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LotjaGi6g1v0270500.1

Overview

Field Value
Gene ID LotjaGi6g1v0270500
Transcript ID LotjaGi6g1v0270500.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Receptor protein kinase, putative; TAIR: AT4G20940.1 Leucine-rich receptor-like protein kinase family protein; Swiss-Prot: sp|C0LGQ9|Y4294_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20940; TrEMBL-Plants: tr|A0A072V606|A0A072V606_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi6g1v0270500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:58465602..58471057) extracted from Lotus japonicus Gifu genome v1.2.

ATTCGGGATTTAATCACAGTTAAGACTCTTCATCCCTCCTCAAAGTGTATTATGTGAGGATCGAACCCAAGAGCTTTTCC CACACACTCACTCAATTTGCGTTGTCAACTTAGTTTCCACCCTAAAGTAAATAACTTTGTATTTACACCTTTAACCAATT TAACAATTAGGGTTTTGTTTCAAGGTCCTCTCTTGTCACATGCCTGCTAAAAGAGTCACTAGCTAAAAAGGACAAAGGTA CTGTCTTTTTAAGGTTTTGTTGGTACCCTCCATTAAAGTAATTCATGGGGTTATTTACTGTTTTAGCAATTTCATTTCTT CATTTTGGGTTGTAAAAAGATCTCCACGCTTCAATCAAAGCTTTTAGGACCAAAAAATAATTTTCATGGGTCCCTTCACC TTTATTGCAGCATGGATGTCAAATTGGGTACTCATTTCCTTTTTCTCCATGAGTTGGTTGTAGCTAAAATGCTTCTGTTT TTCTTCAGTTCTGAAGTCTAAAGGTCTAATCTTTGTGCTAATTTCCACTGTCTGCTTCAAAAGGATGATACTTGAGGGTA GGGATTTCTTCTGCAGTCTACATTGTACCTAAAAGAATTTATTTTTGGTAAGAAACATTGTGTTTATTTTGTTCAGATCT CTAAAAAATGTCTCATTTTCATTTGTTTGTTTCATTTCACTGTCATTTATGTCTTAGCTTTACTCTGTGCCAGGTACAGC TAATGGTTGTTGCTTTTCAAGCTATACTGCATTTCAAGATTATGTTTTTTTAAGGACAAGGAATCTCTTGGAGCTTCTGG TTTCCCAATATTTGGCTGTGGTTTAGCATGTAAATGTGATGAGTTTTGATTTTTTTTTTCAAATCTAGTGCTGTGTTTAT CATATCTCATGAAATGCTGTCTTTTGCTTGCAGAAGTTTAGGTCACTTGTGGTTTTGAAGACAGCTCTTAGGTTCTTTGG GTTTTGACTGTAAGTAAGTCCTTCACTTAGTGTAGATTGAGGAGCTTGAGGATCCAACTCTCTTCTTTTAGGGGATTGAA CTTGCTTCTATTTTAAATTGGTGGTATCTTGGGAATCTAATTTGTACTATTTGTTGGCTGGTGTCAAAGGTAGTTGATGT CCTTCTGAAGTAGAAGAGTGAGAGCTCACTTTTTGTCTTCACTTGAGTGTGAACTACACATAAGTATACCTTAATTTGTT TATAGAAGACTATGAAGCTCTTTAGGCTTTTAGTGTTATCTTTATCTTTCTTATCAGTTGTGGGGCAGCTTCCTTCCCAG GACATTCTAACATTGCTGGAATTTAAGAAATGTATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGA ATCCATTGACTTTGATGGATGCCCCTCTTCATGGAATGGAGTTTTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTTG ATAACATGGGTCTCTCCGCTGATGCTGACTTAAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAACTCTCCATGTCGAAC AATTTCATGTCAGGAAAACTACCTGACAATGCTGCTGATTTCAAAAGCCTTGAATTCCTGGATATCTCCAATAACCTCTT TTCCTCACCTTTACCACCGGAAATTGGTAACTTTGGTAGCTTGCAGAATCTGTCATTAGCCGGGAACAACTTCTCTGGCC GAATTCCTAACTCCATTTCAGACATGGCTTCTATCAAATCTCTCGACTTGAGCCGCAACTCCTTGTCTGGAGCCCTGCCA GCATCATTGACTAAGCTGAATAATCTTGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTT TGACAAGATCTCTACCCTTGAAAAGCTTGACTTGCATGGGAATATGCTTGATGGTCCTTTAGATGTTGGATTTATGTTTT TATCAAGTGTCAGCTATGTTGATTTCAGTGATAACATGCTATCAAATTCTGATTCCCGGAAGCAGGAGTTTCTACCACGA ATATCGGAAAGTATTAAGCATCTGAATTTAAGCCACAACCAGCTTACTGGGTCATTGGTTGGTGGAGCTGAGCAATCCAT TTTCCAAAACTTGAAGGTTTTGGACCTCAGCTACAATCAGATGAATGGAGAGTTGCCTGGGTTTGATTTTGTTTATGATC TCCAGGTCTTAAAGCTTAGCAACAACAAGTTTTCAGGATTTATTCCCAATGGCCTGCTAAAAGGAGACTCTCTGGTTTTA ACTGAACTGGATTTGAGTGCCAACAATCTCTCAGGTAGATTAGCAGTTCCAATTTTTCTTTTCCTCGAAATAAAACCTGT CTTATTTTACAATGGAATTGATTATTTGTGATATTACATGAGTCCTCAGTTTTTAATTGATATTAATCTTGTAATCATCT TGTCTTTCAGGGCCTTTAGGTATGATTACATCTACAACACTTGGTGTTCTTAATCTCTCGTCAAATGGGTTCACTGGTGA GCTGCCGCCTCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAATAACAAATTTGAAGGAAATCTATCCAGGATGTTGA AATGGGGGAATATAGAATTTCTTGATCTCAGCGGGAATCATTTGACAGGGGCCATCCCTGAGGTAACTCCTCAATTTCTG AGGTTAAATTATTTGAATCTATCCCATAATTCTATTAGCAGCTCCCTCCCAAGAGTCTTAGCACAGTATCCAAAGCTTAG CGTGCTTGATATCAGTTCCAACCAGTTAGATGGTCTACTTCTAGCTGATCTGCTCGCAATGCAGACATTGCAAGAGCTCC ATCTTGAAAATAACATGATCTCTGGTGGCATCAACTTATCATCTTCTTCTGGCCAATCACATCTTCAAATTCTCGATCTT TCCCACAATCAGCTTAACAGTTATTTCCCTGATGAGTTTGGGTCATTGACTGACCTGAGAGTGCTCAATATTGCTGGAAA TAATTTCTCCGGTTCTCTTCCAACAAGCATTTCTGACATGAGTTTTCTTGATTCTCTCGATATATCAGAGAATCATTTTA CTGGTTCTCTACCAAATAACATGCCAAAGGGACTCAAGAACTTCAATGCTTCACAAAATGATCTGTCTGGAGTTGTCCCA GAAATTCTTAGAAACTTTTCTAGTTCTTCTTTCTTTCCTGGGAATACTAAGCTACGTTTTCCAAATGGTCCTCCTGGATC AACTATTTCACCTGCTGAAAGTTCCAAGAGAAAGTCTATGACCACTGTCGTCAAAGTAATAATTATAGTATCATGTGTGG TTGCTCTCATCATATTAATCTTGCTGGCTGTCTTCATACACTACATACGCATGTCAAGATCTCCACCAGAATATGATACA AGTAAGGATATCCGTGCGCGTCCCCAACCGGTTATCTCTGGCCCAATTCGCGCTTCGGACCGGGGAGGTGCTTTGGTTGT ATCAGCTGAGGACCTTGTCAGTTCACGTAAAGGGTCACCGTCAGCGGAAATCAGCCCCGATGAAAAAACAGCAGCTGTAA CCGGGTTCTCACCATCAAAACACAGCCACATTTCATGGTCACCAGAATCTGGTGATTCCTATACTGCTGATAGTCTTGCA AGGTTAGATACAAGATCACCAGATAGGTTGATTGGGGAGCTACATTTTCTGGATGATACGATATCATTGACGCCCAAGGA GCTCTCAAGGGCCCCAGCTGAAGTTTTGGGCAGAAGTAGTCATGGTACTTCTTACAAAGCAACTCTGGACAATGGTATAT TGTTGAGAGTGAAGTGGTTGAGAGAAGGGGTGGCTAAACAGAGGAAAGAATTTGTTAAAGAGATCAAAAAATTTGCGAAC ATCAGGCATCCAAATGTCGTCGGATTGAGAGGATACTATTGGGGTCCTACACAGCATGAGAAGCTTATTCTTTCAGATTA CATTTCACCAGGAAGTCTTGCAAGTTTTCTTTATGGTAATGTGTTGATGTTCTTTATGATTGACTAGACTGCCTTTCTTC AATTTCAAAGTTAAATAAAGGGAGACACTCCTGGAATGGAGGTGTTGGGTAGTGAGGAACTATGAACAAGATATATAGAG GATTTGAATGATGAGATAATATGAAAGACAATAATAGTAAAAATGTCTTGAACATAGTTGTTAATTTCCAATTTGTTAAC CTATCTAAATGGTCTTTTGCAATGCTTGGAAGTCTACTTACCATGATATGTAGTACTTCACCAAACATATATCTAGCTTG AAGGTCTTGTATAAATTTTATTACCTAATTTTTTATTTTCAGCCTTATTCCTTCTAATTGTATCCTGAAAGTTTTCGTAT TAATTCCAATGCATATCATGTTTTGCTTGTGCAGCTAGTAGATGTTTCGGAATTATCAGCTGTTATATATTATATCTTTT GTTTTTCTTCAACATTTGATGCTTGAACTTAACCATATTTGAATTTTCAGATCGACCAGGGAGGAAAGGCCCCCTAACCT GGGCCCAAAGGCTCAAATTAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTCGATCGTGCTGTTCCCCATGGG AACCTTAAAGCCACCAATGTGTTGTTAGATACACCCGATATGAATGCACGTGTCTCTGATTACTGCCTTCACCGGCTCAT GACTCAAGCTGGTACCATGGAGCAGATTCTTGATGCTGGGGTCTTGGGTTACCGCGCACCAGAGCTAGCTGCTTCCAAGA AGCCAATGCCCTCCTTCAAGTCTGATGTGTATGCTTTTGGGGTGATACTTTTGGAACTTCTAACTGGAAGATGTGCTGGT GATGTGGTATCCGGTGAAGACGGAGGTGTGGATCTTACAGATTGGATAAGGTTGCGCGTATCTGAAGGTCGAGGCTCAGA ATGTTTTGATGCTATCTTGATGCCAGAAATGAGCAATTCAGTTGTAGAAAAGGGGATGAAGGAGGTCCTAGGAATAGCGA TTCGATGCATTCGATCAGTTTCAGAAAGACCTGGCATCAAGACTATATATGAAGATCTTTCTTCTATATAGTTTGCTCTT GCTAACAACTTGAACTCTGACATGTTATGGGAATCAATGTCTCATTGGCAACCTGTGTTTGTTCAGAGCTTGGCTTTTTA ACATGTTTGTAATTGTATTGACCATTTTTTTCATGTAAAAATGGGGCATATTGGAAAAGCAGATACATGGCTAGTACATG ATGGTGATGACCATCTAATTTTGTCTTAAAGTAGTATGTGTTATGAAATCTGAATCATTTTGGTTGATTTCATTCATTGC TGTACTATGGCTAGCATTACTTGTTTGCCCTACTTTTTTTTATGCCCAAATGATAGAGCTAGTGCGAGGATGGAGAAATT AGAGCATTAGTGAGCACTATAAGTTAACTCATTCTTGAGCATTGTAGTGGTACTATTAGTTGATACGTGGTTTTCATCAA GTTGAATTTTGTCCCC 

CDS sequence (LotjaGi6g1v0270500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGCTCTTTAGGCTTTTAGTGTTATCTTTATCTTTCTTATCAGTTGTGGGGCAGCTTCCTTCCCAGGACATTCTAAC ATTGCTGGAATTTAAGAAATGTATCAAGCATGACCCTACTGGTTATGTCCTCAATTCCTGGAATGAGGAATCCATTGACT TTGATGGATGCCCCTCTTCATGGAATGGAGTTTTGTGTAATGGTGGTAATGTTGCTGGGGTTGTCCTTGATAACATGGGT CTCTCCGCTGATGCTGACTTAAGTGTTTTTTCAAACCTCACAAAGCTTGTGAAACTCTCCATGTCGAACAATTTCATGTC AGGAAAACTACCTGACAATGCTGCTGATTTCAAAAGCCTTGAATTCCTGGATATCTCCAATAACCTCTTTTCCTCACCTT TACCACCGGAAATTGGTAACTTTGGTAGCTTGCAGAATCTGTCATTAGCCGGGAACAACTTCTCTGGCCGAATTCCTAAC TCCATTTCAGACATGGCTTCTATCAAATCTCTCGACTTGAGCCGCAACTCCTTGTCTGGAGCCCTGCCAGCATCATTGAC TAAGCTGAATAATCTTGTATCTCTTAACTTGTCTCATAATGGCTTCACTGGAAAAATTCCCAAAGGTTTTGACAAGATCT CTACCCTTGAAAAGCTTGACTTGCATGGGAATATGCTTGATGGTCCTTTAGATGTTGGATTTATGTTTTTATCAAGTGTC AGCTATGTTGATTTCAGTGATAACATGCTATCAAATTCTGATTCCCGGAAGCAGGAGTTTCTACCACGAATATCGGAAAG TATTAAGCATCTGAATTTAAGCCACAACCAGCTTACTGGGTCATTGGTTGGTGGAGCTGAGCAATCCATTTTCCAAAACT TGAAGGTTTTGGACCTCAGCTACAATCAGATGAATGGAGAGTTGCCTGGGTTTGATTTTGTTTATGATCTCCAGGTCTTA AAGCTTAGCAACAACAAGTTTTCAGGATTTATTCCCAATGGCCTGCTAAAAGGAGACTCTCTGGTTTTAACTGAACTGGA TTTGAGTGCCAACAATCTCTCAGGGCCTTTAGGTATGATTACATCTACAACACTTGGTGTTCTTAATCTCTCGTCAAATG GGTTCACTGGTGAGCTGCCGCCTCTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAATAACAAATTTGAAGGAAATCTA TCCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGCGGGAATCATTTGACAGGGGCCATCCCTGAGGTAAC TCCTCAATTTCTGAGGTTAAATTATTTGAATCTATCCCATAATTCTATTAGCAGCTCCCTCCCAAGAGTCTTAGCACAGT ATCCAAAGCTTAGCGTGCTTGATATCAGTTCCAACCAGTTAGATGGTCTACTTCTAGCTGATCTGCTCGCAATGCAGACA TTGCAAGAGCTCCATCTTGAAAATAACATGATCTCTGGTGGCATCAACTTATCATCTTCTTCTGGCCAATCACATCTTCA AATTCTCGATCTTTCCCACAATCAGCTTAACAGTTATTTCCCTGATGAGTTTGGGTCATTGACTGACCTGAGAGTGCTCA ATATTGCTGGAAATAATTTCTCCGGTTCTCTTCCAACAAGCATTTCTGACATGAGTTTTCTTGATTCTCTCGATATATCA GAGAATCATTTTACTGGTTCTCTACCAAATAACATGCCAAAGGGACTCAAGAACTTCAATGCTTCACAAAATGATCTGTC TGGAGTTGTCCCAGAAATTCTTAGAAACTTTTCTAGTTCTTCTTTCTTTCCTGGGAATACTAAGCTACGTTTTCCAAATG GTCCTCCTGGATCAACTATTTCACCTGCTGAAAGTTCCAAGAGAAAGTCTATGACCACTGTCGTCAAAGTAATAATTATA GTATCATGTGTGGTTGCTCTCATCATATTAATCTTGCTGGCTGTCTTCATACACTACATACGCATGTCAAGATCTCCACC AGAATATGATACAAGTAAGGATATCCGTGCGCGTCCCCAACCGGTTATCTCTGGCCCAATTCGCGCTTCGGACCGGGGAG GTGCTTTGGTTGTATCAGCTGAGGACCTTGTCAGTTCACGTAAAGGGTCACCGTCAGCGGAAATCAGCCCCGATGAAAAA ACAGCAGCTGTAACCGGGTTCTCACCATCAAAACACAGCCACATTTCATGGTCACCAGAATCTGGTGATTCCTATACTGC TGATAGTCTTGCAAGGTTAGATACAAGATCACCAGATAGGTTGATTGGGGAGCTACATTTTCTGGATGATACGATATCAT TGACGCCCAAGGAGCTCTCAAGGGCCCCAGCTGAAGTTTTGGGCAGAAGTAGTCATGGTACTTCTTACAAAGCAACTCTG GACAATGGTATATTGTTGAGAGTGAAGTGGTTGAGAGAAGGGGTGGCTAAACAGAGGAAAGAATTTGTTAAAGAGATCAA AAAATTTGCGAACATCAGGCATCCAAATGTCGTCGGATTGAGAGGATACTATTGGGGTCCTACACAGCATGAGAAGCTTA TTCTTTCAGATTACATTTCACCAGGAAGTCTTGCAAGTTTTCTTTATGATCGACCAGGGAGGAAAGGCCCCCTAACCTGG GCCCAAAGGCTCAAATTAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTCGATCGTGCTGTTCCCCATGGGAA CCTTAAAGCCACCAATGTGTTGTTAGATACACCCGATATGAATGCACGTGTCTCTGATTACTGCCTTCACCGGCTCATGA CTCAAGCTGGTACCATGGAGCAGATTCTTGATGCTGGGGTCTTGGGTTACCGCGCACCAGAGCTAGCTGCTTCCAAGAAG CCAATGCCCTCCTTCAAGTCTGATGTGTATGCTTTTGGGGTGATACTTTTGGAACTTCTAACTGGAAGATGTGCTGGTGA TGTGGTATCCGGTGAAGACGGAGGTGTGGATCTTACAGATTGGATAAGGTTGCGCGTATCTGAAGGTCGAGGCTCAGAAT GTTTTGATGCTATCTTGATGCCAGAAATGAGCAATTCAGTTGTAGAAAAGGGGATGAAGGAGGTCCTAGGAATAGCGATT CGATGCATTCGATCAGTTTCAGAAAGACCTGGCATCAAGACTATATATGAAGATCTTTCTTCTATATAG 

Protein sequence (LotjaGi6g1v0270500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKLFRLLVLSLSFLSVVGQLPSQDILTLLEFKKCIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNMG LSADADLSVFSNLTKLVKLSMSNNFMSGKLPDNAADFKSLEFLDISNNLFSSPLPPEIGNFGSLQNLSLAGNNFSGRIPN SISDMASIKSLDLSRNSLSGALPASLTKLNNLVSLNLSHNGFTGKIPKGFDKISTLEKLDLHGNMLDGPLDVGFMFLSSV SYVDFSDNMLSNSDSRKQEFLPRISESIKHLNLSHNQLTGSLVGGAEQSIFQNLKVLDLSYNQMNGELPGFDFVYDLQVL KLSNNKFSGFIPNGLLKGDSLVLTELDLSANNLSGPLGMITSTTLGVLNLSSNGFTGELPPLTGSCAVLDLSNNKFEGNL SRMLKWGNIEFLDLSGNHLTGAIPEVTPQFLRLNYLNLSHNSISSSLPRVLAQYPKLSVLDISSNQLDGLLLADLLAMQT LQELHLENNMISGGINLSSSSGQSHLQILDLSHNQLNSYFPDEFGSLTDLRVLNIAGNNFSGSLPTSISDMSFLDSLDIS ENHFTGSLPNNMPKGLKNFNASQNDLSGVVPEILRNFSSSSFFPGNTKLRFPNGPPGSTISPAESSKRKSMTTVVKVIII VSCVVALIILILLAVFIHYIRMSRSPPEYDTSKDIRARPQPVISGPIRASDRGGALVVSAEDLVSSRKGSPSAEISPDEK TAAVTGFSPSKHSHISWSPESGDSYTADSLARLDTRSPDRLIGELHFLDDTISLTPKELSRAPAEVLGRSSHGTSYKATL DNGILLRVKWLREGVAKQRKEFVKEIKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLASFLYDRPGRKGPLTW AQRLKLAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDMNARVSDYCLHRLMTQAGTMEQILDAGVLGYRAPELAASKK PMPSFKSDVYAFGVILLELLTGRCAGDVVSGEDGGVDLTDWIRLRVSEGRGSECFDAILMPEMSNSVVEKGMKEVLGIAI RCIRSVSERPGIKTIYEDLSSI 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 5 5 -
SignalP_GRAM_NEGATIVE 1 18 18 -
SignalP_EUK 1 18 18 -
Phobius 1 22 22 -
SignalP_GRAM_POSITIVE 1 24 24 -
PANTHER 5 1062 1058 0.0
PANTHER 5 1062 1058 0.0
Phobius 6 17 12 -
Phobius 18 22 5 -
Gene3D 19 185 167 2.9E-37
Pfam 22 67 46 9.8E-8
Phobius 23 636 614 -
SUPERFAMILY 43 380 338 5.44E-50
SMART 117 141 25 120.0
Pfam 143 201 59 2.7E-8
SMART 165 188 24 120.0
SMART 189 212 24 92.0
Gene3D 189 259 71 6.2E-11
Gene3D 260 622 363 3.3E-75
Pfam 267 280 14 1.2
SUPERFAMILY 291 597 307 1.26E-44
Pfam 292 307 16 1.8
SMART 314 338 25 74.0
Pfam 412 467 56 4.8E-9
SMART 430 453 24 110.0
Pfam 480 540 61 6.0E-9
SMART 504 526 23 72.0
SMART 527 555 29 140.0
Phobius 637 660 24 -
TMHMM 637 659 23 -
Phobius 661 1062 402 -
MobiDBLite 707 744 38 -
MobiDBLite 726 744 19 -
Gene3D 775 858 84 1.1E-10
ProSiteProfiles 781 1062 282 27.863
SUPERFAMILY 784 1059 276 1.57E-47
Pfam 785 982 198 8.4E-29
Gene3D 860 1062 203 7.9E-36

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0270500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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