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| Field | Value |
|---|---|
| Gene ID | Lj2g3v1988690 |
| Transcript ID | Lj2g3v1988690.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: lon protease homolog 2, peroxisomal-like [Cicer arietinum] gi|502160472|ref|XP_004511756.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 37 | 112 | 76 | 0 | – | |
| PANTHER | 37 | 112 | 76 | 0 | ||
| Hamap | 40 | 925 | 886 | 53.311 | ||
| SUPERFAMILY | 47 | 104 | 58 | 1.44E-08 | ||
| SMART | 47 | 291 | 245 | 1.30E-28 | ||
| Pfam | 48 | 291 | 244 | 5.10E-21 | ||
| TIGRFAM | 50 | 913 | 864 | 5.80E-300 | ||
| MobiDBLite | 105 | 134 | 30 | – | – | |
| SUPERFAMILY | 143 | 290 | 148 | 1.44E-08 | ||
| PANTHER | 144 | 918 | 775 | 0 | – | |
| PANTHER | 144 | 918 | 775 | 0 | ||
| Coils | 326 | 346 | 21 | – | – | |
| SUPERFAMILY | 390 | 656 | 267 | 3.23E-49 | ||
| Gene3D | 397 | 590 | 194 | 2.10E-34 | ||
| CDD | 423 | 584 | 162 | 7.85E-14 | – | |
| SMART | 438 | 583 | 146 | 9.70E-12 | ||
| Pfam | 442 | 579 | 138 | 2.50E-21 | ||
| PRINTS | 446 | 465 | 20 | 2.40E-49 | – | |
| Gene3D | 591 | 653 | 63 | 2.30E-26 | – | |
| Gene3D | 700 | 721 | 22 | 2.30E-26 | – | |
| Pfam | 707 | 914 | 208 | 2.50E-76 | ||
| Gene3D | 729 | 913 | 185 | 1.30E-63 | ||
| PRINTS | 733 | 749 | 17 | 2.40E-49 | – | |
| SUPERFAMILY | 733 | 912 | 180 | 1.10E-47 | ||
| PRINTS | 815 | 834 | 20 | 2.40E-49 | – | |
| ProSitePatterns | 818 | 826 | 9 | – | ||
| PRINTS | 845 | 864 | 20 | 2.40E-49 | – | |
| PRINTS | 868 | 886 | 19 | 2.40E-49 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP-dependent peptidase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds. | ||
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Protein quality control for misfolded or incompletely synthesized proteins | The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins. | ||
| Biological process | Protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
Expression pattern of Lj2g3v1988690.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj2g3v1988690.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.